Inferring the history of speciation in house mice from autosomal, X-linked, Y-linked and mitochondrial genes
Version of Record online: 8 DEC 2008
© 2008 The Authors. Journal compilation © 2008 Blackwell Publishing Ltd
Volume 17, Issue 24, pages 5349–5363, December 2008
How to Cite
GERALDES, A., BASSET, P., GIBSON, B., SMITH, K. L., HARR, B., YU, H.-T., BULATOVA, N., ZIV, Y. and NACHMAN, M. W. (2008), Inferring the history of speciation in house mice from autosomal, X-linked, Y-linked and mitochondrial genes. Molecular Ecology, 17: 5349–5363. doi: 10.1111/j.1365-294X.2008.04005.x
- Issue online: 8 DEC 2008
- Version of Record online: 8 DEC 2008
- Received 27 May 2008; revision received 15 August 2008; accepted 24 September 2008
Fig. S1 Neighbour-joining trees depicting the evolutionary relationships between all the haplotypes found at (a) Chrng, (b) Med19, (c) Prpf3, (d) Clcn6, (e) G6pdx, (f) Ocrl, (g) Jarid1d and (h) control region. Haplotypes found in Mus domesticus are followed by a white box, found in M. musculus by a black box and found in M. castaneus in a grey box. Numbers next to the haplotype boxes indicate the number of chromosomes in which the given haplotype was present and the populations where they were found. Bootstrap values equal or higher to 80 are shown next to branches. Whenever available, sequences of M. spretus, M. spicilegus and M. caroli were included.
Table S1 Populations and sampling localities for all the samples used in this study
Table S2 Amplicon and primer details
Table S3 Length, number of sites (SNPs) and number of chromosomes (Nx) of non-recombining data sets used for IM and IMa analyses after removing missing data
Table S4 Levels of polymorphism within populations of house mice, and divergence between these populations and Mus caroli
Table S5 Counts of exclusive (Sd, Sm, Sc), shared (Ss) and fixed (Sf) sites between species pairs of house mice
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Please note: Wiley Blackwell is not responsible for the content or functionality of any supporting information supplied by the authors. Any queries (other than missing content) should be directed to the corresponding author for the article.