• Barnosky AD (2004) Biodiversity Response to Climate Change in the Middle Pleistocene: The Porcupine Cave Fauna from Colorado. University of California Press, Berkeley, CA.
  • Belle E, Ramakrishnan U, Mountain JL, Barbujani G (2006) Serial coalescent simulations suggest a weak genealogical relationship between Etruscans and modern Tuscans. Proceedings of the National Academy of Sciences, USA, 103, 80128017.
  • Chan YL, Anderson CNK, Hadly EA (2006) Bayesian estimation of the timing and severity of a population bottleneck from ancient DNA. Public Library of Science, Genetics, 2, e59.
  • Grayson DK (1993) The Desert’s Past: A Natural Prehistory of the Great Basin. Smithsonian Institution Press, Washington, DC.
  • Hadly EA (1996) Influence of Late Holocene Climate on Northern Rocky Mountain Mammals. Quaternary Research, 46, 298310.
  • Hadly EA, Ramakrishnan U, Chan YL et al. (2004) Genetic response to climatic change: insights from ancient DNA and phylochronology. Public Library of Science, Biology, 2, e29.
  • Ho SYW, Phillips MJ, Cooper A, Drummond AJ (2005) Time dependency of molecular rate estimates and systematic overestimation of recent divergence times. Molecular Biology and Evolution, 22, 15611568.
  • Ho SYW, Kolokotronis S-O, Allaby RG (2007a) Elevated substitution rates estimated from ancient DNA sequences. Biology Letters, 3, 202205.
  • Ho SYW, Shapiro B, Phillips MJ, Cooper A, Drummond A (2007b) Evidence for time dependency of molecular rate estimates. Systematic Biology, 56, 515522.
  • Hofreiter M, Rabeder G, Jaenicke-Despres V et al. (2004) Evidence for reproductive isolation between cave bear populations. Current Biology, 14, 4043.
  • Lambert DM, Ritchie PA, Millar CD et al. (2002) Rates of evolution in ancient DNA from Adélie penguins. Science, 295, 22702273.
  • Navascués M, Emerson BC (2009) Elevated sustitution rate estimates from ancient DNA: model violation and bias of Bayesian methods. Molecular Ecology, 18, 43904397.
  • Ramakrishnan U, Hadly EA (2009) Using phylochronology to reveal cryptic population histories: review and synthesis of 29 ancient DNA studies. Molecular Ecology, 18, 13101330.
  • Tishkoff SA, Gonder MK, Henn BM et al. (2007) History of click-speaking populations of Africa inferred from mtDNA and Y chromosome variation. Molecular Biology and Evolution, 24, 21802195.
  • Valdiosera CE, Garcia-Garitagoitia JL, Garcia N et al. (2008) Surprising migration and population size dynamics in ancient Iberian brown bears (Ursus arctos). Proceedings of National Academy of Sciences, USA, 105, 51235128.
  • Woodhams M (2006) Can deleterious mutations explain the time dependancy of molecular rate estimates? Molecular Biology and Evolution, 23, 22712273.