This paper is part of an ongoing project on SNP discovery to map QTLs for timing of breeding and personality in great tits. Nikkie van Bers is a postdoctoral fellow working on this project. Knees van Oers is at the Netherlands Institute of Ecology and its interested in the evolutionary genetics of animal personality. Hindrik Kerstens is a PhD at Animal Breeding and Genomics Centre, Wageningen University and has a strong interest in bioinformatics. Bert Dibbits is technical assistant in molecular biology at Animal Breeding and Genomics Centre, Wageningen University. Richard Crooijmans is assistant professor at Animal Breeding and Genomics Centre, Wageningen University, Dand is interested in genome research of farm animals. Marcel Visser is professor at the Department of Animal Ecology at the Netherlands institute of Ecology and is interested in great tit lay date plasticity and its micro-evolution in response to climate change. Martien Groenen is Professor in Animal Genomics at Animal Breeding and Genomics Centre, Wageningen University, Project and has a broad interest in comparative and population genomics of animals.
Genome-wide SNP detection in the great tit Parus major using high throughput sequencing
Version of Record online: 10 FEB 2010
© 2010 Blackwell Publishing Ltd
Special Issue: Next Generation Molecular Ecology
Volume 19, Issue Supplement s1, pages 89–99, March 2010
How to Cite
BERS, N. E. M. V., OERS, K. V., KERSTENS, H. H. D., DIBBITS, B. W., CROOIJMANS, R. P. M. A., VISSER, M. E. and GROENEN, M. A. M. (2010), Genome-wide SNP detection in the great tit Parus major using high throughput sequencing. Molecular Ecology, 19: 89–99. doi: 10.1111/j.1365-294X.2009.04486.x
- Issue online: 10 FEB 2010
- Version of Record online: 10 FEB 2010
- Received 29 May 2009; revision received 30 September 2009; accepted 15 October 2009
Supplementary information is available online containing the primer and contig sequences, used for the validation of the assembly and the SNP detection. It also contains the mapping positions of these contigs, the confirmation status of the SNPs used for the validation and the accession numbers of the confirmed SNPs. Furthermore, a graphical representation of the distribution of the great tit contigs over the zebra finch genome is provided.
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|MEC_4486_sm_revision_Supl_fig_contigs.doc||343K||Supporting info item|
|MEC_4486_sm_revision_supplementaryinformation.xls||34K||Supporting info item|
Please note: Wiley Blackwell is not responsible for the content or functionality of any supporting information supplied by the authors. Any queries (other than missing content) should be directed to the corresponding author for the article.