Fig. S1 Heterozygous site single nucleotide polymorphism identification criteria.

Fig. S2 Sequence coverage correspondence.

Fig. S3 Validation of identified single nucleotide polymorphisms by PCR and Sanger sequencing.

Table S1 Sequencing statistics summary

Table S2 PCR amplification and sequencing primers

Table S3 Sample-level heterozygosity, for sites with coverage sufficient for SNP identification from both fecal and blood DNA results for each individual

The following Datasets (S1 and S2) are available from

Datasets S1 Filtered per-site nucleotide sequence coverage.

Datasets S2 Genotypes for identified single nucleotide polymorphisms.

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