Footprints of selection in the ancestral admixture of a New World Creole cattle breed
Article first published online: 20 JUN 2011
© 2011 Blackwell Publishing Ltd
Volume 20, Issue 15, pages 3128–3143, August 2011
How to Cite
GAUTIER, M. and NAVES, M. (2011), Footprints of selection in the ancestral admixture of a New World Creole cattle breed. Molecular Ecology, 20: 3128–3143. doi: 10.1111/j.1365-294X.2011.05163.x
- Issue published online: 21 JUL 2011
- Article first published online: 20 JUN 2011
- Received 11 February 2011; revision received 2 May 2011; accepted 10 May 2011
Table S1 SNP bovine genome coverage based on the Btau_4.0 bovine genome assembly
Table S2FST for each pair of populations
Table S3 Individual SNP results for CGU iHS and ZEB/CGU, AFT/CGU, EUT/CGU, AFT/EUT, AFT/ZEB and EUT/ZEB Rsb and the three Δ ancestry estimates
Table S4 Summary of AFT/EUT, AFT/ZEB and EUT/ZEB Rsb for the 23 candidate regions identified in CGU (see Table 2).
Fig. S1 Between group PCA results.
Fig. S2 Empirical distribution of CGU iHS, ZEB/CGU Rsb, AFT/CGU Rsb and EUT/CGU Rsb scores.
Fig. S3 Average local ancestry from each of the three origins (EUT, AFT and ZEB) in CGU individuals.
Fig. S4 Distribution of maximum (A) and minimum (B) Δ ancestries for the three clusters over 50 000 permutations.
|MEC_5163_sm_FigureS1.pdf||43K||Supporting info item|
|MEC_5163_sm_FigureS2.pdf||37K||Supporting info item|
|MEC_5163_sm_FigureS3.pdf||8216K||Supporting info item|
|MEC_5163_sm_FigureS4.pdf||53K||Supporting info item|
|MEC_5163_sm_DATA-GAUTIER-NAVES-2011-tar.bz2||5659K||Supporting info item|
|MEC_5163_sm_TableS1.xls||14K||Supporting info item|
|MEC_5163_sm_TableS2.xls||14K||Supporting info item|
|MEC_5163_sm_TableS3.xls||8357K||Supporting info item|
|MEC_5163_sm_TableS4.doc||44K||Supporting info item|
Please note: Wiley Blackwell is not responsible for the content or functionality of any supporting information supplied by the authors. Any queries (other than missing content) should be directed to the corresponding author for the article.