Population genomics of wild and laboratory zebrafish (Danio rerio)
Article first published online: 16 SEP 2011
© 2011 Blackwell Publishing Ltd
Volume 20, Issue 20, pages 4259–4276, October 2011
How to Cite
WHITELEY, A. R., BHAT, A., MARTINS, E. P., MAYDEN, R. L., ARUNACHALAM, M., UUSI-HEIKKILÄ, S., AHMED, A. T. A., SHRESTHA, J., CLARK, M., STEMPLE, D. and BERNATCHEZ, L. (2011), Population genomics of wild and laboratory zebrafish (Danio rerio). Molecular Ecology, 20: 4259–4276. doi: 10.1111/j.1365-294X.2011.05272.x
- Issue published online: 10 OCT 2011
- Article first published online: 16 SEP 2011
- Received 4 December 2010; revision received 16 July 2011; accepted 6 August 2011
Fig. S1 Allele frequency spectra for wild populations and three lab strains.
Fig. S2 Distribution of unbiased expected heterozygosity (He) values averaged over 10 wild populations (SRN and WYD excluded because of small sample size) or over three lab strains for SNPs.
Fig. S3 Log probability from the STRUCTURE model against number of population groups (K).
Table S1 Pairwise ΦST estimates (below diagonal), pairwise net nucleotide differences per site (Da; above diagonal, multiplied by100), and number of shared haplotypes between pairs of sample sites (in parentheses)
Table S2 Pairwise genetic differentiation for SNPs
Table S3 Outlier loci for 11 wild populations (lab strains excluded)
Table S4 Outlier loci for 11 wild populations and three strains
Data S1 Ascertainment bias.
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