Genomic signature of natural and anthropogenic stress in wild populations of the waterflea Daphnia magna: validation in space, time and experimental evolution
Version of Record online: 18 JAN 2012
© 2012 Blackwell Publishing Ltd
Volume 21, Issue 9, pages 2160–2175, May 2012
How to Cite
ORSINI, L., SPANIER, K. I. and DE MEESTER, L. (2012), Genomic signature of natural and anthropogenic stress in wild populations of the waterflea Daphnia magna: validation in space, time and experimental evolution. Molecular Ecology, 21: 2160–2175. doi: 10.1111/j.1365-294X.2011.05429.x
- Issue online: 17 APR 2012
- Version of Record online: 18 JAN 2012
- Received 9 June 2011; revision received 8 November 2011; accepted 17 November 2011
Table S1 List of populations sampled for the spatial survey and their characteristics.
Table S2 Quantitative assessment of fish predation, land use intensity and parasite infection in the populations from the spatial survey.
Table S3 Collinear variation of environmental stressors tested with Mantel test.
Table S4 Details on the microsatellite markers used in the genome scan analysis.
Table S5 Outlier analysis conducted with microsatellite markers.
Table S6 Outlier analysis conducted with SNP markers.
Table S7 GO annotation of the outlier loci and of candidate genes putatively liked to them.
Table S8 Pairwise Fst values in the set of populations analyzed.
Table S9 Summary statistics of assembly and scaffolding for D. magna.
Fig. S1 Population genetic structure based on neutral microsatellites.
Fig. S2 Candidate genes linked to specific and general stress response.
Fig. S3 LD analysis.
Fig. S4 Allele frequency at neutral and selected loci in the spatial survey.
Fig. S5 Allele frequency at selected loci in the temporal survey.
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