Data S1. Unphased Mysis opsin sequences.

Data S2. Estimates of population differentiation within Mysis salemaai in the opsin gene (nonsynonymous variation) and at seven allozyme loci (data from Väinölä et al. 1994).

Data S3. Input data (in Arlequin format) for COI molecular diversity analyses.

Data S4. Input data files for opsin PAML analyses.

Fig. S1 Two-dimensional model of Mysis opsin molecule based on comparison with bovine rhodopsin.

Table S1 The distribution of inferred haplotype sequences in populations of seven continental species of Mysis.

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