Data S1 A list of sequences (in FASTA format), not including sequences which appeared in single individuals only (these are given in a separate list).

Data S2 A list of sequences which appeared in single individuals (in FASTA format).

Table S1 Diversity of avian malaria lineages in collared flycatchers from Gotland. Prevalence of lineages can be obtain by dividing the number of positives by the total screened (212 individuals).

Fig. S1 A sequence logo showing the relative frequencies of various amino acids in particular positions of the examined fragment of the MHC class IIB 2nd exon.

Fig. S2 Frequency distribution of MHC II B alleles in Gotland population of collared flycatchers.

Fig. S3 Distribution of the number of alleles per individual flycatcher.

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