¶Present address: Karen Sullam, Eawag, Seestrasse 79, 6047 Kastanienbaum, Switzerland.
Environmental and ecological factors that shape the gut bacterial communities of fish: a meta-analysis
Version of Record online: 4 APR 2012
© 2012 Blackwell Publishing Ltd
Volume 21, Issue 13, pages 3363–3378, July 2012
How to Cite
SULLAM, K. E., ESSINGER, S. D., LOZUPONE, C. A., O’CONNOR, M. P., ROSEN, G. L., KNIGHT, R., KILHAM, S. S. and RUSSELL, J. A. (2012), Environmental and ecological factors that shape the gut bacterial communities of fish: a meta-analysis. Molecular Ecology, 21: 3363–3378. doi: 10.1111/j.1365-294X.2012.05552.x
- Issue online: 21 JUN 2012
- Version of Record online: 4 APR 2012
- Received 27 September 2011; revision received 20 December 2011; accepted 29 December 2011
Table S1 Habitats, lifestyles, and phylogenetic affiliations of fish gut bacteria and their closest GenBank relatives.
Table S2 List of primers used in all studies included in this meta-analysis.
Fig. S1 Ordinal classifications of sequences from whole libraries of fish that were derived from culture independent methods.
Fig. S2 Phylogenetic tree of all representative fish gut bacterial sequences used in the study.
Fig. S3 Principal coordinates analysis based on pairwise unweighted UniFrac distances for bacterial communities from culture-independent data only.
Fig. S4 UniFrac cluster analysis dendrogram illustrating similarity of fish gut microbiota to communities from other hosts and habitats.
Fig. S5 Principal coordinates analysis as shown in figure 2 with each sample labeled by the initials of each fish species and genus.
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