Mitogenome sequencing reveals shallow evolutionary histories and recent divergence time between morphologically and ecologically distinct European whitefish (Coregonus spp.)
Article first published online: 17 APR 2012
© 2012 Blackwell Publishing Ltd
Volume 21, Issue 11, pages 2727–2742, June 2012
How to Cite
JACOBSEN, M. W., HANSEN, M. M., ORLANDO, L., BEKKEVOLD, D., BERNATCHEZ, L., WILLERSLEV, E. and GILBERT, M. T. P. (2012), Mitogenome sequencing reveals shallow evolutionary histories and recent divergence time between morphologically and ecologically distinct European whitefish (Coregonus spp.). Molecular Ecology, 21: 2727–2742. doi: 10.1111/j.1365-294X.2012.05561.x
- Issue published online: 24 MAY 2012
- Article first published online: 17 APR 2012
- Received 17 October 2011; revision received 21 January 2012; accepted 27 January 2012
Table S1 Primer information.
Table S2 Comparison of models in BEAST.
Fig. S1 The ELW reference sequence from GenBank (accession no. NC_002646.1) (Miya & Nishida 2000) showing the position of the ribosomal genes, protein coding genes, control region and the positions of the primers used for the long-range PCRs.
Fig. S2 Maximum likelihood phylogeny made in MEGA v5 with 1000 bootstrap indicated above branches.
Fig. S3 Bayesian skyline plots (BSPs) of mitogenome data vs. a model of constant size.
Fig. S4 Bayesian skyline plots (BSPs) of mitogenome data vs. a model of constant size.
Fig. S5 Overview of parameters and model settings for the final simulation.
Fig. S6 Distributions of model parameters (current population effective size, Ne; expansion factor) using Approximate Bayesian Computation for the final simulations.
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