Fig. S1 Gene genealogies of individual MLST markers.

Fig. S2 Accumulation of phylogenetic diversity across groups of ITS rRNA sequences.

Table S1 New SNP genotyping primers and theirlocation in the Bd genome (based on JEL423 assembly by the Broad Institute).

Data S1 Bd MLST genotype data in Genepop format and representative allele sequences.

Data S2 Bd distribution in Brazil.

Data S3 Aligned ITS rRNA sequences in nexus format.

Data S4 Spore size and DNA content measurements.

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