Supporting Information

Additional Supporting Information may be found in the online version of this article under the DOI reference: doi: 10.1111/j.1365-3113.2011.00597.x.

Figure S1. Amino acid majority rule consensus Diptera phylogeny for 38 taxa.

Figure S2. Nucleotide majority rule consensus Diptera tree for 38 taxa.

Figure S3. Pattern of substitutions in the 73 lineages of the Diptera supertree.

Figure S4. Saturation plot of COI DNA barcoding region.

Table S1. List of Diptera taxa used in this study, with amino acid and nucleotide GenBank accession numbers.

Table S2. Interactions within the cytochrome c oxidase subunit I (COI) DNA barcoding region, and the number of phylogenetic changes for amino acids and each codon position when mapped onto the COI amino acid phylogeny and the COI nucleotide phylogeny.

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SYEN_597_sm_ts1_s2.doc80KSupporting info item

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