†These authors contributed equally to this work.
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Environmental and hormonal regulation of the activity–dormancy cycle in the cambial meristem involves stage-specific modulation of transcriptional and metabolic networks
Article first published online: 5 APR 2007
DOI: 10.1111/j.1365-313X.2007.03077.x
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How to Cite
Druart, N., Johansson, A., Baba, K., Schrader, J., Sjödin, A., Bhalerao, R. R., Resman, L., Trygg, J., Moritz, T. and Bhalerao, R. P. (2007), Environmental and hormonal regulation of the activity–dormancy cycle in the cambial meristem involves stage-specific modulation of transcriptional and metabolic networks. The Plant Journal, 50: 557–573. doi: 10.1111/j.1365-313X.2007.03077.x
- †
†These authors contributed equally to this work.
Publication History
- Issue published online: 25 APR 2007
- Article first published online: 5 APR 2007
- Received 18 October 2006; revised 20 December 2006; accepted 22 December 2006.
References
- , , , , , , , and (2006) Integration of plant responses to environmentally activated phytohormonal signals. Science, 311, 91–94.
- and (1997) Spring cold hardiness under strong genetic control in Oregon populations of Pseudotsuga menziesii var. menziesii1. Can. J. For. Res. 27, 1773–1780.
- , and (1997) Chill responsive dehydrins in blueberry: are they associated with cold hardiness or dormancy transitions? Physiol. Plant. 101, 8–16.
- , , , , , , , and (2006) The CBF1-dependent low temperature signalling pathway, regulon and increase in freeze tolerance are conserved in Populus spp. Plant Cell Environ. 29, 1259–1272.
- (1997) Seed germination and dormancy. Plant Cell, 9, 1055–1066.
- , and (2003) GABA signaling: a conserved and ubiquitous mechanism. Trends Cell Biol. 13, 607–610.
- , , and (2001) General transcription factors bind promoters repressed by Polycomb group proteins. Nature, 412, 651–655.
- , , , , , and (2006) Transgenic modification of gai or rgl1 causes dwarfing and alters gibberellins, root growth, and metabolite profiles in Populus. Planta, 224, 1–12.
- (1983) Bud dormancy, correlation between organs and morphogenesis in woody plants. Sovit. Plant Physiol. 30, 458–471.
- , and (1993) A simple and efficient method for isolating RNA from pine trees. Plant Mol. Biol. Rep. 11, 113–116.
- , , et al. (2002) A unique short-chain dehydrogenase/reductase in Arabidopsis glucose signaling and abscisic acid biosynthesis and functions. Plant Cell, 14, 2723–2743.
- and (1992) Seasonal changes in the concentration of the major storage protein and its mRNA in xylem ray cells of poplar trees. Plant Mol. Biol. 20, 365.
- , , and (2004) A prominent role for the CBF cold response pathway in configuring the low-temperature metabolome of Arabidopsis. Proc. Natl Acad. Sci. USA, 101, 15243–15248.
- and (2005) Nitrogen storage and seasonal nitrogen cycling in populus: bridging molecular physiology and ecophysiology. New Phytol. 167, 19–30.
- and , eds. (1985) Metabolic significance of transamination. In Transaminases. New York: John Wiley and Sons Inc.
- , , , , , , , and (2003) Analysis of gene expression in the developing mouse retina. Proc. Natl Acad. Sci. USA, 100, 5491–5496.
- (2003) Non-linear normalization and background correction in one-channel cDNA microarray studies. Bioinformatics, 19, 825–833.
- and (2002) Daylength and spatial expression of a gibberellin 20-oxidase isolated from hybrid aspen (Populus tremula L. × P. tremuloides Michx.). Planta, 214, 920–930.
- , , , , , and (2004) Differential stage-specific regulation of cyclin-dependent kinases during cambial dormancy in hybrid aspen. Plant J., 38, 603–615.
- and (1997) Seasonal changes in the ultrastructure of the vascular cambium of Robinia pseudoacacia. Trees, 11, 191–202.
- and (2002) Arabidopsis transcriptome profiling indicates that multiple regulatory pathways are activated during cold acclimation in addition to the CBF cold response pathway. Plant Cell, 14, 1675–1690.
- , , and (1997) Hydrogen peroxide- and glutathione-associated mechanisms of acclimatory stress tolerance and signalling. Physiol. Plant. 100, 241–254.
- , and (2004) Arabidopsis transcriptional activators CBF1, CBF2, and CBF3 have matching functional activities. Plant Mol. Biol. 54, 767–781.
- ed (1980) Aminotransferases in higher plants. In The Biochemistry of Plants. New York: Academic Press.
- , , , and (2004) Design of experiments: an efficient strategy to identify factors influencing extraction and derivatization of Arabidopsis thaliana samples in metabolomic studies with gas chromatography/mass spectrometry. Anal. Biochem. 331, 283–295.
- , and (2005) Plant cold acclimation: the role of abscisic acid. J. Plant Growth Regul. 24, 308–318.
- (1993) Daylength and thermal time responses of bud burst during dormancy release in some northern deciduous trees. Physiol. Plant. 88, 531–540.
- , , and (2000) The role of inorganic phosphate in the development of freezing tolerance and the acclimatization of photosynthesis to low temperature is revealed by the pho mutants of Arabidopsis thaliana. Plant J. 24, 383–396.
- , , , , , , , , and (2005) High-throughput data analysis for detecting and identifying differences between samples in GC/MS-based metabolomic analyses. Anal. Chem. 77, 5635–5642.
- and (1988) Gibberellins and photoperiodis control of shoot elongation in Salix. Physiol. Plant. 74, 371–376.
- and (2005) RNA interference of Arabidopsis beta-amylase8 prevents maltose accumulation upon cold shock and increases sensitivity of PSII photochemical efficiency to freezing stress. Plant J. 44, 730–743.
- , , , , , , and (2004) Exploring the temperature-stress metabolome of Arabidopsis. Plant Physiol. 136, 4159–4168.
- , , , and (2004) FIE and CURLY LEAF polycomb proteins interact in the regulation of homeobox gene expression during sporophyte development. Plant J. 37, 707–719.
- , , and (2005) A cellular timetable of autumn senescence. Plant Physiol. 139, 1635–1648.
- , and (2001) Role of glutathione in adaptation and signalling during chilling and cold acclimation in plants. Physiol. Plant. 113, 158–164.
- , and (1999) Structure and function of the vascular cambium. CRC Acad. Sci. Paris, 322, 633–650.
- and (1974) Rest in the cambium of Abies balsamea. Can. J. Bot. 52, 1723–1730.
- , , , , , , , , and (2004) Identification of cold-inducible downstream genes of the Arabidopsis DREB1A/CBF3 transcriptional factor using two microarray systems. Plant J. 38, 982–993.
- and (2005) Shoot branching. Annu. Rev. Plant Biol. 56, 353–374.
- , , and (2005) Global analysis of the core cell cycle regulators of Arabidopsis identifies novel genes, reveals multiple and highly specific profiles of expression and provides a coherent model for plant cell cycle control. Plant J. 41, 546–566.
- , , , , , , and (2005) A genomic approach to investigate developmental cell death in woody tissues of Populus trees. Genome Biol. 6, R34.
- and (1995) Comparison between high-resolution selected ion monitoring, selected reaction monitoring and four-sector tandem mass spectrometry in quantitative analysis of gibberellins in milligram amounts of plant tissue. Anal. Chem. 67, 1711–1716.
- , , , and (2005) Genome-wide profiling of stored mRNA in Arabidopsis thaliana seed germination: epigenetic and genetic regulation of transcription in seed. Plant J, 41, 697–709.
- and (1981) Accumulation of food reserves in cottonwood stems during dormancy induction. Can. J. For. Res. 11, 145–154.
- (1957) Photoperiodism in woody plants. Proc. Am. Soc. Horticult. Sci. 70, 526–544.
- , , , , , , and (1999) Mutations in FIE, a WD polycomb group gene, allow endosperm development without fertilization. Plant Cell, 11, 407–416.
- , , , , , , and (1997) Ectopic expression of oat phytochrome A in hybrid aspen changes critical daylength for growth and prevents cold acclimatization. Plant J. 12, 1339–1350.
- , and (2004) The homeobox genes ATHB12 and ATHB7 encode potential regulators of growth in response to water deficit in Arabidopsis. Plant Mol. Biol. 55, 663–677.
- (1971) Dormancy of trees in winter. Science, 171, 29–36.
- (1987) Hormonal aspects of bud and seed dormancy in temperate-zone woody plants. Horticult. Sci. 22, 845–850.
- , , , , and (2004) Short-day potentiation of low temperature-induced gene expression of a C-repeat-binding factor-controlled gene during cold acclimation in silver birch. Plant Physiol. 136, 4299–4307.
- and (1999) The 9-cis-epoxycarotenoid cleavage reaction is the key regulatory step of abscisic acid biosynthesis in water-stressed bean. Proc. Natl Acad. Sci. USA, 96, 15354–15361.
- , , , , and (2004) The Effect of {alpha}-amanitin on the arabidopsis seed proteome highlights the distinct roles of stored and neosynthesized mRNAs during germination. Plant Physiol. 134, 1598–1613.
- , , and (2004) Responses of poplar to chilling temperatures: proteomic and physiological aspects. Plant Biol. (Stuttg.) 6, 81–90.
- , , et al. (2000) Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Science, 290, 2105–2110.
- , and (2001) The shoot apical meristem restores its symplasmic organization during chilling-induced release from dormancy. Plant J. 26, 249–264.
- , , , , and (2002) PtABI3 impinges on the growth and differentiation of embryonic leaves during bud set in poplar. Plant Cell, 14, 1885–1901.
- and (1997) Proteins related to endodormancy (rest) in woody perennials. Plant Sci. 126, 119–144.
- , , et al. (2003) TM4: a free, open-source system for microarray data management and analysis. Biotechniques, 34, 374–378.
- (1974) Transition of metabolisms in living poplar bark from growing to wintering stages and vice versa. Plant Physiol. 54, 544–549.
- (1988) Temperature induced changes in starch and sugars in the stem of Populus xcanadensis-robusta. J. Plant Physiol. 132, 608–612.
- , , et al. (2005) GC-MS libraries for the rapid identification of metabolites in complex biological samples. FEBS Lett. 579, 1332–1337.
- , , , , , and (2003) Poplar auxin transport in the wood-forming tissues of hybrid aspen is under simultaneous control of developmental and environmental signals. PNAS, 130, 10096–10101.
- , , , , , and (2004) Cambial meristem dormancy in trees involves extensive remodelling of the transcriptome. Plant J. 40, 173–187.
- (1987) Seasonal Variation in Structure and Function of the Vascular Cambium and Characteristics of the Wood in Salix. Stockholm: Department of Botany, Stockholm University.
- , , , , and (2001) Repressing a repressor: gibberellin-induced rapid reduction of the RGA protein in Arabidopsis. Plant Cell, 13, 1555–1566.
- , , , , , , and (2006) UPSC-BASE – Populus transcriptomics online. Plant J. 48, 806–817.
- (2004) Linear models and empirical bayes methods for assessing differential expression in microarray experiments. Stat. Appl. Genet. Mol. Biol. 3, Article 3.
- and (2002) A plant for all seasons: alterations in photosynthetic carbon metabolism during cold acclimation in Arabidopsis. Curr. Opin. Plant Biol. 5, 199–206.
- , , and (1996) Auxin as a positional signal in pattern formation in plants. Proc. Natl Acad. Sci. USA, 93, 9282–9286.
- and (1983) The gamma-aminobutyric acid shunt in germinating Sinapis alba seeds. Plant Sci. Lett. 31, 269–273.
- , , , and (2005) Roles of the CBF2 and ZAT12 transcription factors in configuring the low temperature transcriptome of Arabidopsis. Plant J. 41, 195–211.
- and (1999) Cold-induced freezing tolerance in Arabidopsis. Plant Physiol. 120, 391–400.
- (1970) Cold resistance and injury in woody plants. Science, 169, 1269–1278.
- and (2006a) Molecular control of cold acclimation in trees. Physiol. Plant. 127, 167–181.
- and (2006b) Molecular control of cold acclimation in trees. Physiol. Plant. 127, 167–181.
- , , and (2002) Independent activation of cold acclimation by low temperature and short photoperiod in hybrid aspen. Plant Physiol. 129, 1633–1641.
- , and (2004) Distribution and partial characterisation of seasonally expressed proteins in different aged shoots and roots of Loring peach. Tree Physiol. 24, 339–345.
- , , , , and (2004) Activation of gibberellin biosynthesis and response pathways by low temperature during imbibition of Arabidopsis thaliana seeds. Plant Cell, 16, 367–378.

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