Figure S1. Pairwise percentage identity between homoeologous BACs from S. officinarum, S. spontaneum and sorghum, scaled from 50% to 100%. S. spontaneum sequences are considered as reference. Genes and major transposable element positions are indicated by an arrow, whereas blue boxes indicate exons. Figure S2. Dot plot comparison of BAC clones. (a) S. spontaneum BAC 265O22 compared to S. officinarum BAC 51L01, (b) BAC 265O22 compared to sorghum BAC 110K5 (c) BAC 51L01 compared to BAC 110K5. Specific sequence elements are given along the axis according to legend of Figure 3. Table S1. Comparative sequence analysis of the introns.

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