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Table S1. VSN normalized expression values calculated for genes in two gene sets (D and AR, as described in the text) identified by Cadman et al., 2006. Table S2. Normalized expression values calculated for genes encoding transcriptional regulators (identified by MIPS and TAIR categories) in the D- and AR-sets. These genes are subsets of those in Table S1. Data for 13 physiological states are summarized in the incorporated figures. Table S3. Normalized expression values calculated for genes encoding ribosomal proteins or proteins otherwise involved in ribosome biogenesis and translation (identified by MIPS and TAIR categories) in the D- and AR-sets. These genes are subsets of those in Table S1. Data for 13 physiological states are summarized in the incorporated figures. Table S4. Normalized expression values of genes that have significantly higher transcript abundance (P < 0.05) in PDD and the dormant imbibed states (PD24 h, PD48 h, PD30d, SD1 and SD2) than in the dry (DDL) and imbibed (DL) AR samples, respectively. Table S5. QRT-PCR expression data and corresponding normalized microarray expression data. Table S6. Venn diagrams summarizing the overlap in genes that have significantly (P < 0.05) higher transcript numbers following exposure of primary dormant seeds to either cold, nitrate or light, compared with all imbibed dormant states (PD24 h, PD48 h, PD30d, SD1 and SD2). Table S7. Normalized expression values of genes encoding proteins involved in nitrate transport, nitrate reduction and the oxidative pentose phosphate pathway (oxPPP). Table S8. Normalized expression values of genes that have significantly different expression levels in treatments exposed to light compared with those without light. Table S9. Gene-specific oligonucleotide sequences used in QRT-PCR.

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TPJ_3118_sm_Tab1.xls404KSupporting info item
TPJ_3118_sm_Tab2.xls76KSupporting info item
TPJ_3118_sm_Tab3.xls77KSupporting info item
TPJ_3118_sm_Tab4.xls33KSupporting info item
TPJ_3118_sm_Tab5.xls25KSupporting info item
TPJ_3118_sm_Tab6.xls25KSupporting info item
TPJ_3118_sm_Tab7.xls44KSupporting info item
TPJ_3118_sm_Tab8.xls30KSupporting info item
TPJ_3118_sm_Tab9.xls19KSupporting info item

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