SEARCH

SEARCH BY CITATION

References

  • Alfano, J.R., Charkowski, A.O., Deng, W.L., Badel, J.L., Petnicki-Ocwieja, T., Van Dijk, K. and Collmer, A. (2000) The Pseudomonas syringae Hrp pathogenicity island has a tripartite mosaic structure composed of a cluster of type III secretion genes bounded by exchangeable effector and conserved effector loci that contribute to parasitic fitness and pathogenicity in plants. Proc. Natl Acad. Sci. USA, 97, 48564861.
  • Almeida, N.F., Yan, S., Lindeberg, M. et al. (2009) A draft genome sequence of Pseudomonas syringae pv. tomato T1 reveals a type III effector repertoire significantly divergent from that of Pseudomonas syringae pv. tomato DC3000. Mol. Plant Microbe Interact. 22, 5262.
  • Ausubel, F.M. (2005) Are innate immune signaling pathways in plants and animals conserved? Nat. Immun. 6, 973979.
  • Axtell, M.J. and Staskawicz, B.J. (2003) Initiation of RPS2-specified disease resistance in Arabidopsis is coupled to the AvrRpt2-directed elimination of RIN4. Cell, 112, 369377.
  • Bao, Y., Lies, D.P., Fu, H. and Roberts, G.P. (1991) An improved Tn7-based system for the single-copy insertion of cloned genes into chromosomes of Gram-negative bacteria. Gene, 109, 167168.
  • Bisgrove, S.R., Simonich, M.T., Smith, N.M., Sattler, A. and Innes, R.W. (1994) A disease resistance gene in Arabidopsis with specificity for two different pathogen avirulence genes. Plant Cell, 6, 927933.
  • Chang, J.H., Goel, A.K., Grant, S.R. and Dangl, J.L. (2004) Wake of the flood: ascribing functions to the wave of type III effector proteins of phytopathogenic bacteria. Curr. Opin. Microbiol. 7, 1118.
  • Chang, J.H., Urbach, J.M., Law, T.F., Arnold, L.W., Hu, A., Gombar, S., Grant, S.R., Ausubel, F.M. and Dangl, J.L. (2005) A high-throughput, near-saturating screen for type III effector genes from Pseudomonas syringae. Proc. Natl Acad. Sci. USA, 102, 25492554.
  • Compeau, G., Al-Achi, B.J., Platsouka, E. and Levy, S.B. (1988) Survival of rifampin-resistant mutants of Pseudomonas fluorescens and Pseudomonas putida in soil systems. Appl. Environ. Microbiol. 54, 24322438.
  • Court, D.L., Sawitzke, J.A. and Thomason, L.C. (2002) Genetic engineering using homologous recombination. Annu. Rev. Genet. 36, 361388.
  • Cunnac, S., Lindeberg, M. and Collmer, A. (2009) Pseudomonas syringae type III secretion system effectors: repertoires in search of functions. Curr. Opin. Microbiol. 12, 5360.
  • Datsenko, K.A. and Wanner, B.L. (2000) One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. Proc. Natl Acad. Sci. USA, 97, 66406645.
  • DeYoung, B.J. and Innes, R.W. (2006) Plant NBS-LRR proteins in pathogen sensing and host defense. Nat. Immun. 7, 12431249.
  • Figurski, D.H. and Helinski, D.R. (1979) Replication of an origin-containing derivative of plasmid RK2 dependent on a plasmid function provided in trans. Proc. Natl Acad. Sci. USA, 76, 16481652.
  • Fouts, D.E., Abramovitch, R.B., Alfano, J.R. et al. (2002) Genomewide identification of Pseudomonas syringae pv. tomato DC3000 promoters controlled by the HrpL alternative sigma factor. Proc. Natl Acad. Sci. USA, 99, 22752280.
  • Fouts, D.E., Badel, J.L., Ramos, A.R., Rapp, R.A. and Collmer, A. (2003) A Pseudomonas syringae pv. tomato DC3000 Hrp (type III secretion) deletion mutant expressing the Hrp system of bean pathogen P. syringae pv. syringae 61 retains normal host specificity for tomato. Mol. Plant Microbe Interact. 16, 4352.
  • Fu, Z.Q., Guo, M., Jeong, B.R., Tian, F., Elthon, T.E., Cerny, R.L., Staiger, D. and Alfano, J.R. (2007) A type III effector ADP-ribosylates RNA-binding proteins and quells plant immunity. Nature, 447, 284288.
  • Fujikawa, T., Ishihara, H., Leach, J.E. and Tsuyumu, S. (2006) Suppression of defense response in plants by the avrBs3/pthA gene family of Xanthomonas spp. Mol. Plant Microbe Interact. 19, 342349.
  • Galan, J.E. and Wolf-Watz, H. (2006) Protein delivery into eukaryotic cells by type III secretion machines. Nature, 444, 567573.
  • Gassmann, W. (2005) Natural variation in the Arabidopsis response to the avirulence gene hopPsyA uncouples the hypersensitive response from disease resistance. Mol. Plant Microbe Interact. 18, 10541060.
  • Grant, S.R., Fisher, E.J., Chang, J.H., Mole, B.M. and Dangl, J.L. (2006) Subterfuge and manipulation: type III effector proteins of phytopathogenic bacteria. Annu. Rev. Microbiol. 60, 425449.
  • Greenberg, J.T. and Yao, N. (2004) The role and regulation of programmed cell death in plant-pathogen interactions. Cell Microbiol. 6, 201211.
  • Guttman, D.S., Vinatzer, B.A., Sarkar, S.F., Ranall, M.V., Kettler, G. and Greenberg, J.T. (2002) A functional screen for the type III (Hrp) secretome of the plant pathogen Pseudomonas syringae. Science, 295, 17221726.
  • Hauck, P., Thilmony, R. and He, S.Y. (2003) A Pseudomonas syringae type III effector suppresses cell wall-based extracellular defense in susceptible Arabidopsis plants. Proc. Natl Acad. Sci. USA, 100, 85778582.
  • House, B.L., Mortimer, M.W. and Kahn, M.L. (2004) New recombination methods for Sinorhizobium meliloti genetics. Appl. Environ. Microbiol. 70, 28062815.
  • Huang, H.C., Schuurink, R., Denny, T.P., Atkinson, M.M., Baker, C.J., Yucel, I., Hutcheson, S.W. and Collmer, A. (1988) Molecular cloning of a Pseudomonas syringae pv. syringae gene cluster that enables Pseudomonas fluorescens to elicit the hypersensitive response in tobacco plants. J. Bacteriol. 170, 47484756.
  • Huynh, T.V., Dahlbeck, D. and Staskawicz, B.J. (1989) Bacterial blight of soybean: regulation of a pathogen gene determining host cultivar specificity. Science, 245, 13741377.
  • Innes, R.W., Bent, A.F., Kunkel, B.N., Bisgrove, S.R. and Staskawicz, B.J. (1993) Molecular analysis of avirulence gene avrRpt2 and identification of a putative regulatory sequence common to all known Pseudomonas syringae avirulence genes. J. Bacteriol. 175, 48594869.
  • Jamir, Y., Guo, M., Oh, H.S., Petnicki-Ocwieja, T., Chen, S., Tang, X., Dickman, M.B., Collmer, A. and Alfano, J.R. (2004) Identification of Pseudomonas syringae type III effectors that can suppress programmed cell death in plants and yeast. Plant J. 37, 554565.
  • Jones, J.D. and Dangl, J.L. (2006) The plant immune system. Nature, 444, 323329.
  • Kim, Y.J., Lin, N.C. and Martin, G.B. (2002) Two distinct Pseudomonas effector proteins interact with the Pto kinase and activate plant immunity. Cell, 109, 589598.
  • Kovach, M.E., Phillips, R.W., Elzer, P.H., Roop, R.M. 2nd and Peterson, K.M. (1994) pBBR1MCS: a broad-host-range cloning vector. BioTechniques, 16, 800802.
  • Kovach, M.E., Elzer, P.H., Hill, D.S., Robertson, G.T., Farris, M.A., Roop, R.M. 2nd and Peterson, K.M. (1995) Four new derivatives of the broad-host-range cloning vector pBBR1MCS, carrying different antibiotic-resistance cassettes. Gene, 166, 175176.
  • Kunkel, B.N., Bent, A.F., Dahlbeck, D., Innes, R.W. and Staskawicz, B.J. (1993) RPS2, an Arabidopsis disease resistance locus specifying recognition of Pseudomonas syringae strains expressing the avirulence gene avrRpt2. Plant Cell, 5, 865875.
  • Kvitko, B.H., Park, D.H., Velasquez, A.C., Wei, C.F., Russell, A.B., Martin, G.B., Schneider, D.J. and Collmer, A. (2009) Deletions in the repertoire of Pseudomonas syringae pv. tomato DC3000 type III secretion effector genes reveal functional overlap among effectors. PLoS Pathog. 5, e1000388.
  • Lindgren, P.B., Peet, R.C. and Panopoulos, N.J. (1986) Gene cluster of Pseudomonas syringae pv. “phaseolicola” controls pathogenicity of bean plants and hypersensitivity of nonhost plants. J. Bacteriol. 168, 512522.
  • De Lorenzo, V., Herrero, M., Jakubzik, U. and Timmis, K.N. (1990) Mini-Tn5 transposon derivatives for insertion mutagenesis, promoter probing, and chromosomal insertion of cloned DNA in gram-negative eubacteria. J. Bacteriol. 172, 65686572.
  • Ma, Q., Zhai, Y., Schneider, J.C., Ramseier, T.M. and Saier, M.H. Jr (2003) Protein secretion systems of Pseudomonas aeruginosa and P. fluorescens. Biochim. Biophys. Acta, 1611, 223233.
  • Mackey, D., Holt, B.F. 3rd, Wiig, A. and Dangl, J.L. (2002) RIN4 interacts with Pseudomonas syringae type III effector molecules and is required for RPM1-mediated resistance in Arabidopsis. Cell, 108, 743754.
  • Mackey, D., Belkhadir, Y., Alonso, J.M., Ecker, J.R. and Dangl, J.L. (2003) Arabidopsis RIN4 is a target of the type III virulence effector AvrRpt2 and modulates RPS2-mediated resistance. Cell, 112, 379389.
  • Niepold, F., Anderson, D. and Mills, D. (1985) Cloning determinants of pathogenesis from Pseudomonas syringae pathovar syringae. Proc. Natl Acad. Sci. USA, 82, 406410.
  • Nomura, K., Debroy, S., Lee, Y.H., Pumplin, N., Jones, J. and He, S.Y. (2006) A bacterial virulence protein suppresses host innate immunity to cause plant disease. Science, 313, 220223.
  • Oh, H.S., Kvitko, B.H., Morello, J.E. and Collmer, A. (2007) Pseudomonas syringae lytic transglycosylases coregulated with the type III secretion system contribute to the translocation of effector proteins into plant cells. J. Bacteriol. 189, 82778289.
  • Peters, J.E. and Craig, N.L. (2001) Tn7: smarter than we thought. Nat. Rev. Mol. Cell Biol. 2, 806814.
  • Pfaffl, M.W. (2001) A new mathematical model for relative quantification in real-time RT-PCR. Nucleic Acids Res. 29, e45.
  • Rahme, L.G., Mindrinos, M.N. and Panopoulos, N.J. (1991) Genetic and transcriptional organization of the hrp cluster of Pseudomonas syringae pv. phaseolicola. J. Bacteriol. 173, 575586.
  • Rahme, L.G., Mindrinos, M.N. and Panopoulos, N.J. (1992) Plant and environmental sensory signals control the expression of hrp genes in Pseudomonas syringae pv. phaseolicola. J. Bacteriol. 174, 34993507.
  • Rentel, M.C., Leonelli, L., Dahlbeck, D., Zhao, B. and Staskawicz, B.J. (2008) Recognition of the Hyaloperonospora parasitica effector ATR13 triggers resistance against oomycete, bacterial, and viral pathogens. Proc. Natl Acad. Sci. USA, 105, 10911096.
  • Rozwadowski, K., Yang, W. and Kagale, S. (2008) Homologous recombination-mediated cloning and manipulation of genomic DNA regions using Gateway and recombineering systems. BMC Biotechnol. 8, 88.
  • Schechter, L.M., Roberts, K.A., Jamir, Y., Alfano, J.R. and Collmer, A. (2004) Pseudomonas syringae type III secretion system targeting signals and novel effectors studied with a Cya translocation reporter. J. Bacteriol. 186, 543555.
  • Schwessinger, B. and Zipfel, C. (2008) News from the frontline: recent insights into PAMP-triggered immunity in plants. Curr. Opin. Plant Biol. 11, 389395.
  • Shan, L., He, P., Li, J., Heese, A., Peck, S.C., Nurnberger, T., Martin, G.B. and Sheen, J. (2008) Bacterial effectors target the common signaling partner BAK1 to disrupt multiple MAMP receptor-signaling complexes and impede plant immunity. Cell Host Microbe, 4, 1727.
  • Sharan, S.K., Thomason, L.C., Kuznetsov, S.G. and Court, D.L. (2009) Recombineering: a homologous recombination-based method of genetic engineering. Nat. protoc. 4, 206223.
  • Silby, M.W., Cerdeno-Tarraga, A.M., Vernikos, G.S. et al. (2009) Genomic and genetic analyses of diversity and plant interactions of Pseudomonas fluorescens. Genome Biol. 10, R51.
  • Sohn, K.H., Lei, R., Nemri, A. and Jones, J.D. (2007) The downy mildew effector proteins ATR1 and ATR13 promote disease susceptibility in Arabidopsis thaliana. Plant Cell, 19, 40774090.
  • Underwood, W., Zhang, S. and He, S.Y. (2007) The Pseudomonas syringae type III effector tyrosine phosphatase HopAO1 suppresses innate immunity in Arabidopsis thaliana. Plant J. 52, 658672.
  • Wei, C.F., Kvitko, B.H., Shimizu, R., Crabill, E., Alfano, J.R., Lin, N.C., Martin, G.B., Huang, H.C. and Collmer, A. (2007) A Pseudomonas syringae pv. tomato DC3000 mutant lacking the type III effector HopQ1-1 is able to cause disease in the model plant Nicotiana benthamiana. Plant J. 51, 3246.
  • Xiang, T., Zong, N., Zou, Y. et al. (2008) Pseudomonas syringae effector AvrPto blocks innate immunity by targeting receptor kinases. Curr. Biol. 18, 7480.
  • Xiao, Y., Lu, Y., Heu, S. and Hutcheson, S.W. (1992) Organization and environmental regulation of the Pseudomonas syringae pv. syringae 61 hrp cluster. J. Bacteriol. 174, 17341741.
  • Xiao, Y., Heu, S., Yi, J., Lu, Y. and Hutcheson, S.W. (1994) Identification of a putative alternate sigma factor and characterization of a multicomponent regulatory cascade controlling the expression of Pseudomonas syringae pv. syringae Pss61 hrp and hrmA genes. J. Bacteriol. 176, 10251036.
  • Yu, G.L., Katagiri, F. and Ausubel, F.M. (1993) Arabidopsis mutations at the RPS2 locus result in loss of resistance to Pseudomonas syringae strains expressing the avirulence gene avrRpt2. Mol. Plant Microbe Interact. 6, 434443.
  • Yuan, J. and He, S.Y. (1996) The Pseudomonas syringae Hrp regulation and secretion system controls the production and secretion of multiple extracellular proteins. J. Bacteriol. 178, 63996402.
  • Zhao, Y., Sundin, G.W. and Wang, D. (2009) Construction and analysis of pathogenicity island deletion mutants of Erwinia amylovora. Can. J. Microbiol. 55, 457464.
  • Zuber, S., Carruthers, F., Keel, C. et al. (2003) GacS sensor domains pertinent to the regulation of exoproduct formation and to the biocontrol potential of Pseudomonas fluorescens CHA0. Mol. Plant Microbe Interact. 16, 634644.
  • Zwiesler-Vollick, J., Plovanich-Jones, A.E., Nomura, K., Bandyopadhyay, S., Joardar, V., Kunkel, B.N. and He, S.Y. (2002) Identification of novel hrp-regulated genes through functional genomic analysis of the Pseudomonas syringae pv. tomato DC3000 genome. Mol. Microbiol. 45, 12071218.