The NADPH-linked acetoacetyl-CoA reductase, (R)-3-hydroxyacyl-CoA dehydrogenase (EC 188.8.131.52), from the bacterium Zoogloea ramigera, involved in the formation of d-3-hydroxybutyryl-CoA for poly(d-3-hydroxybutyrate) biosynthesis, has been purified from an over-producing Escherichia coli strain. The purification was achieved in two steps, yielding an electrophoretically homogeneous enzyme of high specific activity (608 U/mg). The enzyme is an α4 homotetramer of four 25-kDa subunits. It has a Km of 2 μM and a kcat/Km of 1.8 × 108 M−1 s−1 for acetoacetyl-CoA; it is inhibited by acetoacetyl-CoA above 10 μM. Km is 10−10 M for the dehydrogenation. Kinetic studies of the back reaction revealed a sequential mechanism involving a ternary complex. The stereospecificity of the hydride-equivalent transfer was demonstrated using NMR techniques to be 4S (B side). Using the fingerprint method proposed by Wierenga et al. [(1986) J. Mol. Biol. 187, 101–107], we identified a 28-residue stretch (residues 3–31) as a possible NADPH fold. Finally the specificity of the reductase was examined using 3-oxo-acyl-CoA analogs and analogs lacking the adenosine 3′,5′-bisphosphate moiety of CoA. Only the straight-chain C5 analog (3-oxo-propionyl-CoA) was found to be an alternative substrate (40%) for the reductase.
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(R)-3-Hydroxyacyl-CoA dehydrogenase acetoacetyl-CoA reductase (EC 184.108.40.206)
(S)-3-hydroxyacyl-CoA dehydrogenase (EC 220.127.116.11)
glutathione reductase (EC 18.104.22.168)
acetoacetyl-CoA thiolase (EC 22.214.171.124)