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Fig. S1. Analysis of clusters to compare alternate similarity functions using slice #2.

Fig. S2. Bilateral and unilateral cluster analysis for slice #3.

Fig. S3. Bilateral and unilateral cluster analysis for slice #4.

Fig. S4. Bilateral and unilateral cluster analysis for slice #5.

Fig. S5. Bilateral and unilateral cluster analysis for slice #6.

Fig. S6. Photomicrographs show a coronal SCN section double-labeled for LUC (left) and PER2 (middle) and the overlay (right).

Data S1. Supplemental results.

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