Appendix S1 (a) Zinc-finger gene primers and protocol, (b) Microsatellite analysis protocols and references, and (c) Mitochondrial DNA sequencing protocols. Appendix S2 Sample sizes for analyses of microsatellite genotypes and mtDNA sequences, and basic genetic and geographic statistics for the 27 populations of desert bighorn sheep used in this study. Appendix S3 FST values for all sampled populations, estimated from 14 microsatellite loci using GENEPOP.

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