Present address: Department of Chemistry and Biomolecular Science, Macquarie University, Sydney, Australia. Email email@example.com.
Coastal Synechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity
Article first published online: 6 OCT 2008
© 2008 The Authors. Journal compilation © 2008 Society for Applied Microbiology and Blackwell Publishing Ltd
Volume 11, Issue 2, pages 349–359, February 2009
How to Cite
Palenik, B., Ren, Q., Tai, V. and Paulsen, I. T. (2009), Coastal Synechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity. Environmental Microbiology, 11: 349–359. doi: 10.1111/j.1462-2920.2008.01772.x
This whole genome shotgun project has been deposited at DDBJ/EMBL/ GenBank under the project accession ABVN00000000. The version described in this paper is the first version, ABVN01000000. Correspondence and requests for materials should be addressed to I.T.P. and B.P.
- Issue published online: 18 JAN 2009
- Article first published online: 6 OCT 2008
- Received 9 April, 2008; accepted 8 August, 2008.
Fig. S1. Alignment of plasmid replication proteins from two contigs 31182 and 09710 and from a Xanthomonas plasmid.
Table S1. Metagenomic read hits to GOS data.
Table S2. Metagenome read hit # for 9311 and 9902 gene models.
Table S3. Summary of the similarity of metagenomic contigs to different cyanobacterial and heterotrophic bacterial genomes. If the top hit was to a Synechococcus strain and the top six hits included CC9902 or CC9311, the contig was assigned to the closest of those two coastal strains. This was not done for contigs in which the top hit was Prochlorococcus, however.
Please note: Wiley-Blackwell are not responsible for the content or functionality of any supporting materials supplied by the authors. Any queries (other than missing material) should be directed to the corresponding author for the article.
|EMI_1772_sm_Fig_S1.doc||27K||Supporting info item|
|EMI_1772_sm_Table_S1.pdf||22K||Supporting info item|
|EMI_1772_sm_Table_S2a.pdf||223K||Supporting info item|
|EMI_1772_sm_Table_S2b.pdf||263K||Supporting info item|
|EMI_1772_sm_Table_S3.doc||23K||Supporting info item|
Please note: Wiley Blackwell is not responsible for the content or functionality of any supporting information supplied by the authors. Any queries (other than missing content) should be directed to the corresponding author for the article.