Whole-genome expression analysis reveals a role for death-related genes in stress acclimation of the diatom Thalassiosira pseudonana
Article first published online: 31 MAR 2011
© 2011 Society for Applied Microbiology and Blackwell Publishing Ltd
Special Issue: OMICS Driven Microbial Ecology
Volume 14, Issue 1, pages 67–81, January 2012
How to Cite
Thamatrakoln, K., Korenovska, O., Niheu, A. K. and Bidle, K. D. (2012), Whole-genome expression analysis reveals a role for death-related genes in stress acclimation of the diatom Thalassiosira pseudonana. Environmental Microbiology, 14: 67–81. doi: 10.1111/j.1462-2920.2011.02468.x
- Issue published online: 2 JAN 2012
- Article first published online: 31 MAR 2011
- Received 29 November, 2010; accepted 16 February, 2011.
Table S1. Primer sequences used for qRT-PCR analysis.
Table S2. The 72 most highly upregulated genes in exponentially growing, Fe-limited cells.
Table S3. The 96 most highly downregulated genes in exponentially growing, Fe-limited cells.
Table S4. Expression profile of the top 72 upregulated genes in a comprehensive diatom EST database.
Table S5. Representation of homologues to the 632 upregulated, Fe-responsive genes in T. pseudonana within the Ocean Station Papa transcriptome data set.
Table S6. Identity of the 139 upregulated, Fe-responsive genes in T. pseudonana without a homologue in the Phaeodactylum tricornutum genome.
Table S7. Putative stress response genes up- and downregulated in exponentially growing, Fe-limited cells.
Table S8. Putative cell death-related genes up- and downregulated in Fe-limited cells.
Table S9. The 76 upregulated genes affiliated with cellular caspase activity.
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