Mitochondrial DNA Variability in Slovaks, with Application to the Roma Origin

Authors

  • B. A. Malyarchuk,

    Corresponding author
    1. Institute of Biological Problems of the North, Russian Academy of Sciences, Portovaya str. 18, 685000 Magadan, Russia
      Corresponding author: Dr. Boris A. Malyarchuk, Genetics Laboratory, Institute of Biological Problems of the North, Portovaya str., 18, 685000 Magadan, Russia. Fax/Phone: +7 4132 634463. E-mail: malyarchuk@ibpn.ru
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  • M. A. Perkova,

    1. Institute of Biological Problems of the North, Russian Academy of Sciences, Portovaya str. 18, 685000 Magadan, Russia
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  • M. V. Derenko,

    1. Institute of Biological Problems of the North, Russian Academy of Sciences, Portovaya str. 18, 685000 Magadan, Russia
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  • T. Vanecek,

    1. Department of Pathology, Medical Faculty Hospital, Charles University, Pilsen, Czech Republic
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  • J. Lazur,

    1. Department of Laboratory Medicine, LABMED, Kosice, Slovakia
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  • P. Gomolcak

    1. Institute of Pathology, Slovak Medical University, Bratislava, Slovakia
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Corresponding author: Dr. Boris A. Malyarchuk, Genetics Laboratory, Institute of Biological Problems of the North, Portovaya str., 18, 685000 Magadan, Russia. Fax/Phone: +7 4132 634463. E-mail: malyarchuk@ibpn.ru

Summary

To gain insight into the mitochondrial gene pool diversity of European populations, we studied mitochondrial DNA (mtDNA) variability in 207 subjects from western and eastern areas of Slovakia. Sequencing of two hypervariable segments, HVS I and HVS II, in combination with screening of coding region haplogroup-specific RFLP-markers, revealed that the majority of Slovak mtDNAs belong to the common West Eurasian mitochondrial haplogroups (HV, J, T, U, N1, W, and X). However, a few sub-Saharan African (L2a) mtDNAs were detected in a population from eastern part of Slovakia. In addition, about 3% of mtDNAs from eastern Slovakia encompass Roma-specific lineages. By means of complete mtDNA sequencing we demonstrate here that the Roma-specific M-lineages observed in gene pools of different Slavonic populations (Slovaks, Poles and Russians), belong to Indian-specific haplogroups M5a1 and M35. Moreover, we show that haplogroup J lineages found in gene pools of the Roma and some Slavonic populations (Czechs and Slovaks) belong to new subhaplogroup J1a, which is defined by coding region mutation at position 8460.

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