• Affymetrix Inc. (2006) BRLMM: an improved genotype calling method for the GeneChip Human Mapping 500K Array Set.
  • Clayton, D. G., Walker, N. M., Smyth, D. J., Pask, R., Cooper, J. D., Maier, L. M., Smink, L. J., Lam, A. C., Ovington, N. R., Stevens, H. E., Nutland, S., Howson, J. M., Faham, M., Moorhead, M., Jones, H. B., Falkowski, M., Hardenbol, P., Willis, T. D., Todd, J. A. (2005) Population structure, differential bias and genomic control in a large-scale case-control association study. Nat Genet 37, 12431246.
  • Devlin, B., Roeder, K. (1999) Genomic control for association studies. Biometrics 55, 9971004.
  • Di, X., Matsuzaki, H., Webster, T. A., Hubbell, E., Liu, G., Dong, S., Bartell, D., Huang, J., Chiles, R., Yang, G., Shen, M. M., Kulp, D., Kennedy, G. C., Mei, R., Jones, K. W., Cawley, S. (2005) Dynamic model based algorithms for screening and genotyping over 100K SNPs on oligonucleotide microarrays. Bioinformatics 21, 19581963.
  • International HapMap Consortium (2005) A haplotype map of the human genome. Nature 437, 12991320.
  • Kermani, B. G. (2006) Artificial intelligence and global normalization methods for genotyping. US Patent 20060224529.
  • Peiffer, D. A., Le, J. M., Steemers, F. J., Chang, W., Jenniges, T., Garcia, F., Haden, K., Li, J., Shaw, C. A., Belmont, J., Cheung, S. W., Shen, R. M., Barker, D. L., Gunderson, K. L. (2006) High-resolution genomic profiling of chromosomal aberrations using Infinium whole-genome genotyping. Genome Res 16, 11361148.
  • Plagnol, V., Cooper, J. D., Todd, J. A., Clayton, D. G. (2007) A method to address differential bias in genotyping in large scale association studies. PLoS Genet 3, e74.
  • Rabbee, N. & Speed, T. P. (2006) A genotype calling algorithm for Affymetrix SNP arrays. Bioinformatics 1, 712.
  • Teo, Y. Y., Fry, A. E., Clark, T. G., Tai, E. S., Seielstad, M. (2007a) On the usage of HWE for identifying genotyping errors. Ann Hum Genet 71, 701703.
  • Teo, Y. Y., Inouye, M., Small, K. S., Gwilliam, R., Deloukas, P., Kwiatkowski, D. P., Clark, T. G. (2007b) A genotype calling algorithm for the Illumina BeadArray platform. Bioinformatics 23, 27412746.
  • The Wellcome Trust Case Control Consortium (2007) Genomewide association study of 14,000 cases of seven common diseases and 3,000 shared controls. Nature 447, 661678.