SEARCH

SEARCH BY CITATION

References

  • Auton, A., Bryc, K., Boyko, A.R., Lohmueller, K. E., Novembre, J., Reynolds, A., Indap, A., Wright, M. H., Degenhardt, J. D., Gutenkunst, R. N., King, K. S., Nelson, M. R., & Bustamante, C. D. (2009) Global distribution of genomic diversity underscores rich complex history of continental human populations. Genome Res 19, 795803.
  • Barrett, J. C., Fry, B., Maller, J., & Daly, M. J. (2005) Haploview: Analysis and visualization of LD and haplotype maps. Bioinformatics 21, 263265.
  • Berkman, C. C. (2006) Comparative analyses from the Central Asian contribution to Anatolian gene pool with reference to Balkans. Ph.D. Thesis. Middle East Technical University , Ankara , Turkey . (http://etd.lib.metu.edu.tr/upload/12607764/index.pdf).
  • Berkman, C. C., Dinc, H., Sekeryapan, C., & Togan, I. (2008) Alu insertion polymorphisms and an assessment of the genetic contribution of Central Asia to Anatolia with respect to the Balkans. Am J Phys Anthropol 136, 1118.
  • Bersot, T. P., Pépin, G. M., & Mahley, R. W. (2003) Risk determination of dyslipidemia in populations characterized by low levels of high-density lipoprotein cholesterol. Am Heart J 146, 10521060.
  • Bersot, T. P., Vega, G. L., Grundy, S. M., Palaoğlu, K. E., Atagündüz, P., Özbayrakçi, S., Gökdemir, O., & Mahley, R. W. (1999) Elevated hepatic lipase activity and low levels of high density lipoprotein in a normotriglyceridemic, nonobese Turkish population. J Lipid Res 40, 432438.
  • Bonnen, P. E., Pe’er, I., Plenge, R. M., Salit, J., Lowe, J. K., Shapero, M. H., Lifton, R. P., Breslow, J .L., Daly, M. J., Reich, D. E., Jones, K. W., Stoffel, M., Altshuler, D., & Friedman, J. M. (2006) Evaluating potential for whole-genome studies in Kosrae, an isolated population in Micronesia. Nat Genet 38, 214217.
  • Bryc, K., Auton, A., Nelson, M. R., Oksenberg, J. R., Hauser, S. L., Williams, S., Froment, A., Bodo, J.- M., Wambebe, C., Tishkoff, S. A., & Bustamante, C. D. (2010) Genome-wide patterns of population structure and admixture in West Africans and African Americans. Proc Natl Acad Sci USA 107, 786791.
  • Calafell, F., Underhill, P., Tolun, A., Angelicheva, D., & Kalaydjieva, L. (1996) From Asia to Europe: Mitochondrial DNA sequence variability in Bulgarians and Turks. Ann Hum Genet 60, 3549.
  • Cann, H. M., de Toma, C., Cazes, L., Legrand, M. -F., Morel, V., Piouffre, L., Bodmer, J., Bodmer, W. F., Bonne-Tamir, B., Cambon-Thomsen, A., Chen, Z., Chu, J., Carcassi, C., Contu, L., Du, R., Excoffier, L., Ferrara, G. B., Friedlaender, J. S., Groot, H., Gurwitz, D., Jenkins, T., Herrera, R. J., Huang, X., Kidd, J., Kidd, K. K., Langaney, A., Lin, A. A., Mehdi, S. Q., Parham, P., Piazza, A., Pistillo, M. P., Qian, Y., Shu, Q., Xu, J., Zhu, S., Weber, J. L., Greely, H. T., Feldman, M. W., Thomas, G., Dausset, J., & Cavalli-Sforza, L.L. (2002) A human genome diversity cell line panel. Science 296, 261262.
  • Cavalli-Sforza, L. L. (2005) The Human Genome Diversity Project: Past, present and future. Nat Rev Genet 6, 333340.
  • Cinnioğlu, C., King, R., Kivisild, T., Kalfoğlu, E., Atasoy, S., Cavalleri, G. L., Lillie, A. S., Roseman, C. C., Lin, A. A., Prince, K., Oefner, P. J., Shen, P., Semino, O., Cavalli-Sforza, L. L., & Underhill, P. A. (2004) Excavating Y-chromosome haplotype strata in Anatolia. Hum Genet 114, 127148.
  • Comas, D., Calafell, F., Mateu, E., Pérez-Lezaun, A., Bosch, E., Martínez-Arias, R., Clarimon, J., Facchini, F., Fiori, G., Luiselli, D., Pettener, D., & Bertranpetit, J. (1998) Trading genes along the Silk Road: mtDNA sequences and the origin of Central Asian populations. Am J Hum Genet 63, 18241838.
  • Di Benedetto, G., Ergüven, A., Stenico, M., Castrì, L., Bertorelle, G., Togan, I., & Barbujani, G. (2001) DNA diversity and population admixture in Anatolia. Am J Phys Anthropol 115, 144156.
  • Falush, D., Stephens, M., & Pritchard, J. K. (2003) Inference of population structure using multilocus genotype data: Linked loci and correlated allele frequencies. Genetics 164, 15671587.
  • Faroqhi, S. (2007) On the margins of empire: Clients and dependants. pp. 7597. London : I.B.Tauris & Co.
  • Findley, C. V. (2005a) Islamic empires from Temur to the “gunpowder era”. pp. 93132. New York : Oxford University Press.
  • Findley, C. V. (2005b) Islam and empire from the Seljuks through the Mongols. pp. 5692. New York : Oxford University Press.
  • Frye, R. N. (1996) The present is born. pp. 233239. Princeton : Marcus Wiener Publishers.
  • Georg, S., Michalove, P. A., Ramer, A. M., & Sidwell, P. J. (1998) Telling general linguists about Altaic. J Linguistics 35, 6598.
  • Grousset, R. (1970) The Turks and Islam to the thirteenth century. pp. 141170. New Brunswick : Rutgers University Press.
  • Güvenç, B. (1993) Türklerin Kimliği: Kim Bu Türkler? (Identity of Turks: Who are the Turks?). pp. 1952. Ankara : Kültür Bakanlığı.
  • Hodoğlugil, U., Williamson, D. W., Huang, Y., & Mahley, R. W. (2005a) An interaction between the TaqIB polymorphism of cholesterol ester transfer protein and smoking is associated with changes in plasma high-density lipoprotein cholesterol levels in Turks. Clin Genet 68, 118127.
  • Hodoğlugil, U., Williamson, D. W., Huang, Y., & Mahley, R. W. (2005b) Common polymorphisms of ATP binding cassette transporter A1, including a functional promoter polymorphism, associated with plasma high density lipoprotein cholesterol levels in Turks. Atherosclerosis 183, 199212.
  • Hodoğlugil, U., Tanyolaç, S., Williamson, D. W., Huang, Y., & Mahley, R. W. (2006) Apolipoprotein A-V: A potential modulator of plasma triglyceride levels in Turks. J Lipid Res 47, 144153.
  • Hodoğlugil, U., Williamson, D. W., & Mahley, R. W. (2010) Polymorphisms in the hepatic lipase gene affect plasma HDL-cholesterol levels in a Turkish population. J Lipid Res 51, 422430.
  • Hodoğlugil, U., Williamson, D. W., Yu, Y., Farrer, L. A., & Mahley, R. W. (2011) Glucuronic acid epimerase is associated with plasma triglyceride and high-density lipoprotein cholesterol levels in Turks. Ann Hum Genet 75, 398417.
  • Hunter-Zinck, H., Musharoff, S., Salit, J., Al-Ali, K. A., Chouchane, L., Gohar, A., Matthews, R., Butler, M. W., Fuller, J., Hackett, N. R., Crystal, R. G., & Clark, A. G. (2010) Population genetic structure of the people of Qatar. Am J Hum Genet 87, 1725.
  • Hussain, R. (1999) Community perceptions of reasons for preference for consanguineous marriages in Pakistan. J Biosoc Sci 31, 449461.
  • Jakobsson, M. & Rosenberg, N. A. (2007) CLUMPP: A cluster matching and permutation program for dealing with label switching and multimodality in analysis of population structure. Bioinformatics 23, 18011806.
  • Li, J. Z., Absher, D. M., Tang, H., Southwick, A. M., Casto, A. M., Ramachandran, S., Cann, H. M., Barsh, G. S., Feldman, M., Cavalli-Sforza, L. L., & Myers, R. M. (2008) Worldwide human relationships inferred from genome-wide patterns of variation. Science 319, 11001104.
  • Ling, H., Waterworth, D. M., Stirnadel, H. A., Pollin, T. I., Barter, P. J., Kesäniemi, Y. A., Mahley, R. W., McPherson, R., Waeber, G., Bersot, T. P., Cohen, J. C., Grundy, S. M., Mooser, V. E., & Mitchell, B. D. (2009) Genome-wide linkage and association analyses to identify genes influencing adiponectin levels: The GEMS study. Obesity 17, 737744.
  • Mahley, R. W., Arslan, P., Pekcan, G., Pépin, G. M., Ağaçdiken, A., Karaağaoğlu, N., Rakıcıoğlu, N., Nursal, B., Dayanıklı, P., Palaoğlu, K. E., & Bersot, T. P. (2001) Plasma lipids in Turkish children: Impact of puberty, socioeconomic status, and nutrition on plasma cholesterol and HDL. J Lipid Res 42, 19962006.
  • Mahley, R. W., Palaoğlu, K. E., Atak, Z., Dawson-Pepin, J., Langlois, A.-M., Cheung, V., Onat, H., Fulks, P., Mahley, L. L., Vakar, F., Özbayrakçı, S., Gökdemir, O., & Winkler, W. (1995) Turkish Heart Study: Lipids, lipoproteins, and apolipoproteins. J Lipid Res 36, 839859.
  • Mahley, R. W., Pépin, J., Palaoğlu, K. E., Malloy, M. J., Kane, J. P., & Bersot, T. P. (2000) Low levels of high density lipoproteins in Turks, a population with elevated hepatic lipase: High density lipoprotein characterization and gender-specific effects of apolipoprotein E genotype. J Lipid Res 41, 12901301.
  • McClellan, J. & King, M.-C. (2010) Genetic heterogeneity in human disease. Cell 141, 210217.
  • McQuillan, R., Leutenegger, A.-L., Abdel-Rahman, R., Franklin, C. S., Pericic, M., Barac-Lauc, L., Smolej-Narancic, N., Janicijevic, B., Polasek, O., Tenesa, A., MacLeod, A. K., Farrington, S. M., Rudan, P., Hayward, C., Vitart, V., Rudan, I., Wild, S. H., Dunlop, M. G., Wright, A. F., Campbell, H., & Wilson, J. F. (2008) Runs of homozygosity in European populations. Am J Hum Genet 83, 359372.
  • Mergen, H., Öner, R., & Öner, C. (2004) Mitochondrial DNA sequence variation in the Anatolian peninsula (Turkey). J Genet 83, 3947.
  • Nasidze, I., Ling, E. Y. S., Quinque, D., Dupanloup, I., Cordaux, R., Rychkov, S., Naumova, O., Zhukova, O., Sarraf-Zadegan, N., Naderi, G. A., Asgary, S., Sardas, S., Farhud, D. D., Sarkisian, T., Asadov, C., Kerimov, A., & Stoneking, M. (2004) Mitochondrial DNA and Y-chromosome variation in the Caucasus. Ann Hum Genet 68, 205221.
  • Onat, A. (2001) Risk factors and cardiovascular disease in Turkey. Atherosclerosis 156, 110.
  • Onat, A., Hergenç, G., Uzunlar, B., Ceyhan, K., Uyarel, H., Yazıcı, M., Dogan, Y., Özmay, M., Toprak, S., & Sansoy, V. (2003) Determinants of HDL-cholesterol and its prediction of coronary disease among Turks (in Turkish). Arch Turk Soc Cardiol 31, 513.
  • Patterson, N., Price, A. L., & Reich, D. (2006) Population structure and eigenanalysis. PLoS Genet 2, e190.
  • Price, A. L., Zaitlen, N. A., Reich, D., & Patterson, N. (2010) New approaches to population stratification in genome-wide association studies. Nat Rev Genet 11, 459463.
  • Purcell, S., Neale, B., Todd-Brown, K., Thomas, L., Ferreira, M. A. R., Bender, D., Maller, J., Sklar, P., de Bakker, P. I. W., Daly, M. J., & Sham, P. C. (2007) PLINK: A tool set for whole-genome association and population-based linkage analyses. Am J Hum Genet 81, 559575.
  • Quintana-Murci, L., Chaix, R., Wells, R. S., Behar, D. M., Sayar, H., Scozzari, R., Rengo, C., Al-Zahery, N., Semino, O., Santachiara-Benerecetti, A. S., Coppa, A., Ayub, Q., Mohyuddin, A., Tyler-Smith, C., Qasim Mehdi, S., Torroni, A., & McElreavey, K. (2004) Where West meets East: The complex mtDNA landscape of the southwest and Central Asian corridor. Am J Hum Genet 74, 827845.
  • Regueiro, M., Cadenas, A. M., Gayden, T., Underhill, P. A., & Herrera, R. J. (2006) Iran: Tricontinental nexus for Y-chromosome driven migration. Hum Hered 61, 132143.
  • Rosenberg, N. A. (2006) Standardized subsets of the HGDP-CEPH Human Genome Diversity Cell Line Panel, accounting for atypical and duplicated samples and pairs of close relatives. Ann Hum Genet 70, 841847.
  • Rosenberg, N. A., Huang, L., Jewett, E. M., Szpiech, Z. A., Jankovic, I., & Boehnke, M. (2010) Genome-wide association studies in diverse populations. Nat Rev Genet 11, 356366.
  • Rosenberg, N. A., Pritchard, J. K., Weber, J. L., Cann, H. M., Kidd, K. K., Zhivotovsky, L. A., & Feldman, M. W. (2002) Genetic structure of human populations. Science 298, 23812385.
  • Saitou, N. & Nei, M. (1987) The neighbor-joining method: A new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406425.
  • Scheet, P. & Stephens, M. (2006) A fast and flexible statistical model for large-scale population genotype data: Applications to inferring missing genotypes and haplotypic phase. Am J Hum Genet 78, 629644.
  • Silva-Zolezzi, I., Hidalgo-Miranda, A., Estrada-Gil, J., Fernandez-Lopez, J.C., Uribe-Figueroa, L., Contreras, A., Balam-Ortiz, E., del Bosque-Plata, L., Velazquez-Fernandez, D., Lara, C., Goya, R., Hernandez-Lemus, E., Davila, C., Barrientos, E., March, S., & Jimenez-Sanchez, G. (2009) Analysis of genomic diversity in Mexican Mestizo populations to develop genomic medicine in Mexico. Proc Natl Acad Sci USA 106, 86118616.
  • Tamura, K., Dudley, J., Nei, M., & Kumar, S. (2007) MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol Biol Evol 24, 15961599.
  • Tang, H., Peng, J., Wang, P., & Risch, N. J. (2005) Estimation of individual admixture: Analytical and study design considerations. Genet Epidemiol 28, 289301.
  • Teo, Y.-Y., Sim, X., Ong, R. T. H., Tan, A. K. S., Chen, J., Tantoso, E., Small, K. S., Ku, C.-S., Lee, E. J. D., Seielstad, M., & Chia, K.-S. (2009) Singapore Genome Variation Project: A haplotype map of three Southeast Asian populations. Genome Res 19, 21542162.
  • Tian, C., Kosoy, R., Lee, A., Ransom, M., Belmont, J. W., Gregersen, P. K., & Seldin, M. F. (2008) Analysis of East Asia genetic substructure using genome-wide SNP arrays. PLoS One 3, e3862.
  • Wells, R. S., Yuldasheva, N., Ruzibakiev, R., Underhill, P. A., Evseeva, I., Blue-Smith, J., Jin, L., Su, B., Pitchappan, R., Shanmugalakshmi, S., Balakrishnan, K., Read, M., Pearson, N. M., Zerjal, T., Webster, M. T., Zholoshvili, I., Jamarjashvili, E., Gambarov, S., Nikbin, B., Dostiev, A., Aknazarov, O., Zalloua, P., Tsoy, I., Kitaev, M., Mirrakhimov, M., Chariev, A., & Bodmer, W. F. (2001) The Eurasian heartland: A continental perspective on Y-chromosome diversity. Proc Natl Acad Sci USA 98, 1024410249.
  • Xing, J., Watkins, W. S., Shlien, A., Walker, E., Huff, C. D., Witherspoon, D. J., Zhang, Y., Simonson, T. S., Weiss, R. B., Schiffman, J. D., Malkin, D., Woodward, S. R., & Jorde, L. B. (2010) Toward a more uniform sampling of human genetic diversity: A survey of worldwide populations by high-density genotyping. Genomics 96, 199210.
  • Xu, S., Huang, W., Qian, J., & Jin, L. (2008) Analysis of genomic admixture in Uyghur and its implication in mapping strategy. Am J Hum Genet 82, 883894.
  • Xu, S. & Jin, L. (2008) A genome-wide analysis of admixture in Uyghurs and a high-density admixture map for disease-gene discovery. Am J Hum Genet 83, 322336.
  • Yu, Y., Wyszynski, D. F., Waterworth, D. M., Wilton, S. D., Barter, P. J., Kesäniemi, Y. A., Mahley, R. W., McPherson, R., Waeber, G., Bersot, T. P., Ma, Q., Sharma, S. S., Montgomery, D. S., Middleton, L. T., Sundseth, S. S., Mooser, V., Grundy, S.M., & Farrer, L.A. (2005) Multiple QTLs influencing triglyceride and HDL and total cholesterol levels identified in families with atherogenic dyslipidemia. J Lipid Res 46, 22022213.
  • Zerjal, T., Wells, R. S., Yuldasheva, N., Ruzibakiev, R., & Tyler-Smith, C. (2002) A genetic landscape reshaped by recent events: Y-chromosomal insights into Central Asia. Am J Hum Genet 71, 466482.