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Appendix S1. Identification of individuals and description of mitochondrial DNA (mtDNA) sequences (ND4-tRNAGLU and cyt b) from the North American African captive elephant collection.

Appendix S2. Detailed information of the haplotype and transition/transversion data for mtDNA ND4-cyt b sequence.

Appendix S3. Diagnostic sites in the 29 haplotypes found in mtDNA ND4-cyt b of 108 African elephants and 6 Asian elephants from North American zoos. Numbers above the sequences correspond to the position of the polymorphic site starting from the 5′ end of the cyt b. Dots indicate an identical nucleotide at the position relative to haplotype 1.

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