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  • Aber JD, Melillo JM, McClaugherty CA. 1990. Predicting long-term patterns of mass loss, nitrogen dynamics, and soil organic matter formation from initial fine litter chemistry in temperate forest ecosystems. Canadian Journal of Botany 68: 22012208.
  • Amthor JS. 2003. Efficiency of lignin biosynthesis: a quantitative analysis. Annals of Botany 9: 673695.
  • Amundson R, Stern L, Baisden T, Wang Y. 1998. The isotopic composition of soil and soil-respired CO2. Geoderma 82: 83114.
  • Baer SG, Blair JM, Collins SL, Knapp AK. 2003. Soil resources regulate productivity and diversity in newly established tallgrass prairie. Ecology 84: 724735.
  • Bent AF. 1996. Plant disease resistance genes: function meets structure. Plant Cell 8: 17571771.
  • Bent AF, Kunkel BN, Dahlbeck D, Brown KL, Schmidt RL, Giraudat J, Leung JL, Staskawicz BJ. 1994. RPS2 of Arabidopsis thaliana: a leucine-rich repeat class of plant disease resistance genes. Science 265: 18561860.
  • Berg B, Ekbohm G. 1991. Litter mass–loss rates and decomposition patterns in some needle and leaf litter types. Long-term decomposition in a Scots pine forest. VII. Canadian Journal of Botany 69: 14491456.
  • Berg B, Lundmark J-E. 1985. Decomposition of needles and root litter in lodgepole pine and Scots pine monocultural systems. Plant and Soil 138: 123132.
  • Bergmann DW, Lukowitz W, Somerville CR. 2004. Stomatal development and pattern controlled by a MAPKK Kinase. Science 304: 14941497.
  • Binkley D, Giardina C. 1998. Why do tree species affect soils? The warp and woof of tree–soil interactions. Biogeochemistry 42: 89106.
  • Booker FL, Anttonen S, Heagle AS. 1996. Catechin, proanthocyanidin and lignin contents of loblolly pine (Pinus taeda) needles after chronic exposure to ozone. New Phytologist 132: 483492.
  • Byrne ME, Barley R, Curtis M, Arroyo JM, Dunham M, Hudson A, Martienssen RA. 2000. Asymmetric leaves mediate leaf patterning and stem cell function in Arabidopsis. Nature 408: 967971.
  • Camiré C, Côté B, Brulotte S. 1991. Decomposition of roots of black alder and hybrid poplar in short rotation plantings – nitrogen and lignin control. Plant and Soil 138: 123132.
  • Chefetz B, Van Heemst DHC, Chen Y. 2000. Organic matter transformations during the weathering process of spent mushroom substrate. Journal of Environmental Quality 29: 592602.
  • Chen H, Harmon ME, Sexton J, Fasth B. 2002. Fine-root decomposition and N dynamics in coniferous forests of the Pacific Northwest, USA. Canadian Journal of Forest Resources 32: 321321.
  • Collins HP, Blevins RL, Bundy LG, Christenson DR, Dick WA, Huggins DR, Paul EA. 1999. Soil carbon dynamics in corn-based agroecosystems: results from carbon-13 natural abundance. Soil Science Society of America Journal 63: 584591.
  • Coutts MP, Nielsen CCN, Nicoll BC. 1999. The development of symmetry, rigidity, and anchorage in the structural root system of conifers. Plant and Soil 217: 115.
  • Franco-Zorrilla JM, González E, Bustos R, Linhares F, Leyva A, Paz-Ares J. 2004. The transcriptional control of plant responses to phosphate limitation. Journal of Experimental Botany 55: 285293.
  • Gallais A, Hirel B. 2004. An approach to the genetics of nitrogen use efficiency in maize. Journal of Experimental Botany 55: 295306.
  • Giardina CP, Binkley D, Ryan MG, Fownes JH. 2004. Belowground carbon cycling in a humid tropical forest decreases with fertilization. Oecologia 139: 545550.
  • Giardina CP, Ryan MG, Hubbard RM, Binkley D. 2001. Tree species and soil textural controls on carbon and nitrogen mineralization rates. Soil Science Society of American Journal 65: 12721279.
  • Gordon WS, Jackson RB. 2000. Nutrient concentrations in fine roots. Ecology 81: 275280.
  • Harding SA, Leshkevich J, Chiang VL, Tsai C-J. 2002. Differential substrate inhibition couples kinetically distinct 4-coumarate:coenzyme A ligases with spatially distinct metabolic roles in quaking aspen. Plant Physiology 128: 428438.
  • Harrington CA, DeBell DS. 1996. Above– and below–ground characteristics associated with wind topping in a young Populus plantation. Trees 11: 109118.
  • Heath J, Ayres E, Possell M, Bardgett RD, Black HIJ, Grant H, Ineson P, Kerstiens G. 2005. Rising atmospheric CO2 reduces sequestration of root derived soil carbon. Science 309: 17111713.
  • Hedges JL, Cowie JR, Ertel RJ, Barbour RJ, Hatcher PG. 1985. Degradation of carbohydrates and lignins in buried woods. Geochemica Cosmochimica Acta 49: 701711.
  • Hendricks JJ, Aber JD, Nadelhoffer KJ, Hallett RD. 2000. Nitrogen controls on fine root substrate quality in temperate forest ecosystems. Ecosystems 3: 5769.
  • Herms DA, Mattson WJ. 1992. The dilemma of plants – to grow or defend. Quarterly Review of Biology 67: 283335.
  • Higuchi T. 1997. Biochemistry and molecular biology of wood. Berlin, Germany: Springer-Verlag.
  • Ho CK, Chang S-H, Tsai J-Y, Tsai C-J, Chiang VL, Chen Z-Z. 1998. Agrobacterium tumefaciens-mediated transformation of Eucalyptus camaldulensis and production of transgenic plants. Plant Cell Reports 17: 675680.
  • Hobbie EA, Johnson MG, Rygiewicz PT, Tingey DT, Olszyk DM. 2004. Isotopic estimates of new carbon inputs into litter and soils in a four-year climate change experiment with Douglas-fir. Plant and Soil 259: 331343.
  • Hu W-J, Kawaoka A, Tsai C-J, Lung J, Osakabe K, Ebinuma H, Chiang VL. 1998. Compartmentalized expression of two structurally and functionally distinct 4-coumaric acid:coenzyme A ligase (4CL) genes in aspen (Populus tremuloides). Proceedings of the National Academy of Sciences, USA 95: 54705412.
  • Hu W-J, Harding SA, Lung J, Popko JL, Ralph J, Stokke DD, Tsai C-J, Chiang VL. 1999. Repression of lignin biosynthesis promotes cellulose accumulation and growth in transgenic trees. Nature Biotechnology 17: 808812.
  • Jackson RB, Linder CR, Lynch M, Purugganan M, Somerville S, Thayer SS. 2002. Linking molecular insight and ecological research. Trends in Ecology and Evolution 17: 409414.
  • Jobbagy EG, Jackson RB. 2000. The vertical distribution of soil organic carbon and its relation to climate and vegetation. Ecological Applications 10: 423436.
  • Joffre R, Aegren GI, Gillon D, Bosatta E. 2001. Organic matter quality in ecological studies: theory meets experiment. Oikos 93: 451458.
  • Lagrimini LM, Joly RJ, Dunlap JR, Liu T-TY. 1997. The consequence of peroxidase overexpression in transgenic plants on root growth and development. Plant Molecular Biology 33: 887895.
  • Li L, Popko JL, Umezawa T, Chiang VL. 2000. 5-Hydroxyconiferyl aldehyde modulates enzymatic methylation for syringyl monolignol formation, a new view of monolignol biosynthesis in angiosperms. Journal of Biological Chemistry 275: 65376545.
  • Li L, Zhou Y, Cheng X, Sun J, Marita JM, Ralph J, Chiang VL. 2003. Combinatorial modification of multiple lignin traits in trees through multigene cotransformation. Proceedings of the National Academy of Sciences, USA 100: 49394944.
  • Liu QM, Wang SJ, Piao HC, Ouyang ZY. 2003. The changes in soil organic matter in a forest-cultivation sequence traced by stable carbon isotopes. Australian Journal of Soil Research 41: 13171327.
  • Loya WM, Pregitzer KS, Karberg NJ, King JS, Giardina CP. 2003. Reduction of soil carbon formation by tropospheric ozone under increased carbon dioxide levels. Nature 425: 705707.
  • Magill AH, Aber JD. 1998. Long-term effects of experimental nitrogen additions on foliar litter decay and humus formation in forest ecosystems. Plant and Soil 203: 301311.
  • Martienssen RA. 1998. Functional genomics: probing plant gene function and expression with transposons. Proceedings of the National Academy of Sciences, USA 95: 20202026.
  • McClaugherty C, Berg B. 1987. Cellulose, lignin, and nitrogen concentrations as rate regulating factors in late stages of forest litter decomposition. Pedobiologia 80: 101112.
  • Melillo JM, Aber JD, Muratore JF. 1982. Nitrogen and lignin control of hardwood leaf litter decomposition Dynamics. Ecology 63: 621626.
  • Pataki DE, Ellsworth DS, Evans RD, Gnozalez-Meler M, King J, Leavitt SW, Lin G, Matamala R, Pendall E, Siegwolf R, Van Kessel C, Ehleringer JR. 2003. Tracing changes in ecosystem function under elevated carbon dioxide conditions. Bioscience 53: 805818.
  • Paul EA, Clark FE. 1996. Soil microbiology and biochemistry. San Diego, CA, USA: Academic Press.
  • Pilate G, Guiney E, Holt K, Petit-Conil M, Lapierre C, Leplé JC, Pollet B, Mila I, Webster EA, Marstorp HG, Hopkins DW, Jouanin L, Boerjan W, Schuch W, Cornu D, Halpin C. 2002. Field and pulping performances of transgenic trees with altered lignification. Nature Biotechnology 20: 607612.
  • Poorter H, Remkes C. 1990. Leaf area ratio and net assimilation rate of 24 wild species differing in relative growth rate. Oecologia 12: 553559.
  • Pregitzer KS, Zak DR, Curtis PS, Kubiske ME, Teeri JA, Vogel CS. 1995. Atmospheric CO2, soil nitrogen and fine root turnover. New Phytologist 129: 579585.
  • Pregitzer K, Loya W, Kubiske M, Zak D. 2006. Soil respiration in northern forests exposed to elevated atmospheric carbon dioxide and ozone. Oecologia (In press.)
  • Püttsepp Ü. 2004. Effects of sustainable management practices on fine-root systems in willow (Salix viminalis, S. dasyclados), grey alder (Alnus incana) and Norway spruce (Picea abies) stands. PhD Thesis. Uppsala, Sweden: Swedish University of Agricultural Sciences.
  • Reich PB, Tjoelker MG, Walters MB, Vanderklein DW, Buschena C. 1998. Close association of RGR, leaf and root morphology, seed mass and shade tolerance in seedlings of nine boreal tree species grown in high and low light. Functional Ecology 12: 327338.
  • Running SW, Gower ST. 1991. Forest-BGC., A general model of forest ecosystem processes for regional applications. II. Dynamic carbon allocation and nitrogen budgets. Tree Physiology 9: 147160.
  • Scott NA. 1998. Soil aggregation and organic matter mineralization in forests and grasslands: plant species effects. Soil Science Society of America Journal 62: 10811089.
  • Silver WL, Miya RK. 2001. Global patterns in root decomposition: comparisons of climate and litter quality effects. Oecologia 129: 407419.
  • Sparling GP, Feltham CW, Reynolds J, West AW, Singleton P. 1990. Estimation of soil microbial C by a fumigation-extraction method: use on soils of high organic content, and a reassessment of the Kec-factor. Soil Biology and Biochemistry 5: 301307.
  • Steinmann K, Siegwolf RTW, Saurer M, Körner C. 2004. Carbon fluxes to the soil in a mature temperate forest assessed by 13C isotope tracing. Oecologia 141: 489501.
  • Stevenson FJ. 1994. Humus chemistry: genesis, composition, reactions. New York, NY, USA: John Wiley and Sons.
  • Takeuchi Y, Kubiske ME, Isebrands JG, Pregitzer KS, Hendrey G, Karnosky DF. 2001. Photosynthesis, light and nitrogen relationships in a young deciduous forest canopy under open-air CO2 enrichment. Plant, Cell & Environment 24: 12571268.
  • Tsai C-J, Podila GK, Chiang VL. 1994. Agrobacterium-mediated transformation of quaking aspen (Populus tremuloides) and regeneration of transgenic plants. Plant Cell Reports 14: 9497.
  • Tsai C-J, Popko JL, Miclke MR, Hu W-J, Podila GK, Chiang VL. 1998. Suppression of O-methyltransferase gene by homologous sense transgene in quaking aspen causes red-brown wood phenotypes. Plant Physiology 117: 101112.
  • Vance ED, Brookes PC, Jenkinson DS. 1987. An extraction method for measuring soil microbial biomass C. Soil Biology and Biochemistry 19: 703707.
  • Vinton MA, Burke IC. 1997. Contingent effects of plant species on soils along a regional moisture gradient in the Great Plains. Oecologia 110: 393402.
  • Whetton R, Sederoff R. 1995. Lignin Biosynthesis. The Plant Cell 7: 10011013.
  • Whetten RW, MacKay JJ, Sederoff RR. 1998. Recent advances in understanding lignin biosynthesis. Annual Review of Plant Physiology and Plant Molecular Biology 49: 585609.
  • Whitehead D, Gower ST. 2001. Photosynthesis and light-use efficiency by plants in a Canadian boreal forest ecosystem. Tree Physiology 21: 925929.
  • Zak DR, Tilman D, Parmenter RR, Rice CW, Fisher FM, Vose J, Michunas D, Martin CW. 1994. Plant production and soil microorganisms in late successional ecosystems: a continental-scale study. Ecology 75: 23332347.
  • Zak DR, Pregitzer KS. 1998. Integration of ecophysiological and biogeochemical approaches to ecosystem dynamics. In: GroffmanPM, PaceML, eds. Successes, limitations, and frontiers in ecosystem science. New York, NY, USA: Springer-Verlag, 372403.
  • Zak DR, Pregitzer KS, King JS, Holmes WE. 2000. Elevated atmospheric CO2, fine roots and the response of soil microorganisms: a review and hypothesis. New Phytologist 147: 201222.