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  • Agarwal S, Grover A. 2005. Isolation and transcription profiling of low-O2 stress-associated cDNA clones from the flooding-stress-tolerant FR13A rice genotype. Annals of Botany 96: 831844.
  • Agarwal S, Grover A. 2006. Molecular biology, biotechnology and genomics of flooding-associated low O2 stress response in plants. Critical Reviews in Plant Sciences 25: 121.
  • Andersson CR, Jensen EO, Llewellyn DJ, Dennis ES. 1996. A new hemoglobin gene from soybean: a role for hemoglobin in all plants. Proceedings of the National Academy of Sciences, USA 93: 56825687.
  • Appleby CA. 1984. Leghemoglobins and rhizobium respiration. Annual Review of Plant Physiology 35: 443478.
  • Arechaga-Ocampo E, Saenz-Rivera J, Sarath G, Klucas RV, Arredondo-Peter R. 2001. Cloning and expression analysis of hemoglobin genes from maize (Zea mays ssp. mays) and teosinte (Zea mays ssp. parviglumis). Biochimica et Biophysica Acta 1522: 18.
  • Bailey-Serres J, Chang R. 2005. Sensing and signalling in response to oxygen deprivation in plants and other organisms. Annals of Botany 96: 507518.
  • Baxter-Burrell A, Yang Z, Springer PS, Bailey-Serres J. 2002. ROPGAP4-dependent Rop GTPase rheostat controls of Arabidopsis oxygen deprivation tolerance. Science 296: 20262028.
  • Bogusz D, Llewellyn DJ, Craig S, Dennis ES, Appleby CA, Peacock WJ. 1990. Nonlegume hemoglobin genes retain organ-specific expression in heterologous transgenic plants. Plant Cell 2: 633641.
  • Branco-Price C, Kawaguchi R, Ferreira R, Bailey-Serres J. 2005. Genome-wide analysis of transcript abundance and translation in Arabidopsis seedlings subjected to oxygen deprivation. Annals of Botany 96: 647660.
  • Carpin S, Crèvecoeur M, Greppin H, Penel C. 1999. Molecular cloning and tissue-specific expression of an anionic peroxidase in zucchini. Plant Physiology 120: 799810.
  • Chang WW, Huang L, Shen M, Webster C, Burlingame AL, Roberts JK. 2000. Patterns of protein synthesis and tolerance of anoxia in root tips of maize seedlings acclimated to a low-oxygen environment, and identification of proteins by mass spectrometry. Plant Physiology 122: 295318.
  • Dat JF, Capelli N, Folzer H, Bourgeade P, Badot PM. 2004. Sensing and signalling during plant flooding. Plant Physiology and Biochemistry 42: 273282.
  • Dat JF, Folzer H, Parent C, Badot PM, Capelli N. 2006. Chapter 20. Hypoxia stress: Current understanding and perspectives. In: Teixeira da SilvaJ, ed. Floriculture, Ornamental and Plant Biotechnology. Advances and Topical Issues, Vol. 3. London, UK: Global Science Books, 664674.
  • Dickerson RE, Geis I. 1983. Hemoglobin: structure, function, evolution and pathology. Menlo Park, CA, USA: Benjamin-Cummings.
  • Dordas C, Rivoal J, Hill RD. 2003a. Plant haemoglobins, nitric oxide and hypoxic stress. Annals of Botany 91: 173178.
  • Dordas C, Hasinoff BB, Igamberdiev AU, Manac’h N, Rivoal J, Hill RD. 2003b. Expression of a stress-induced haemoglobin affects NO levels produced by alfalfa root cultures under hypoxic stress. Plant Journal 35: 763770.
  • Dordas C, Hasinoff BB, Rivoal J, Hill RD. 2004. Class-1 hemoglobins, nitrate and NO levels in anoxic maize cell-suspension cultures. Planta 219: 6672.
  • Drew MC, He CJ, Morgan PW. 2000. Programmed cell death and aerenchyma formation in roots. Trends in Plant Science 5: 123127.
  • Duff SM, Wittenberg JB, Hill RD. 1997. Expression, purification, and properties of recombinant barley (Hordeum sp.) hemoglobin. Optical spectra and reactions with gaseous ligands. Journal of Biological Chemistry 272: 1674616752.
  • Durner J, Klessig DF. 1999. Nitric oxide as a signal in plants. Current Opinion in Plant Biology 2: 369374.
  • Folzer H, Capelli N, Dat JF, Badot PM. 2005. Molecular cloning and characterization of calmodulin genes in young oak seedlings (Quercus petraea L.) during early flooding stress. Biochimica et Biophysica Acta 1727: 213219.
  • Folzer H, Dat JF, Capelli N, Rieffel D, Badot PM. 2006. Response of sessile oak seedlings (Quercus petraea) to flooding: an integrated study. Tree Physiology 26: 759766.
  • Gabaldon C, Gomez Ros LV, Pedreno MA, Ros Barcelo A. 2005. Nitric oxide production by the differentiating xylem of Zinnia elegans. New Phytologist 165: 121130.
  • Giaccia AJ, Simon MC, Johnson R. 2004. The biology of hypoxia: the role of oxygen sensing in development, normal function, and disease. Genes and Development 18: 21832194.
  • Hardison RC. 1996. A brief history of hemoglobins: plant, animal, protist, and bacteria. Proceedings of the National Academy of Sciences, USA 93: 56755679.
  • Hebelstrup KH, Hunt P, Dennis E, Jensen SB, Jensen EO. 2006. Hemoglobin is essential for normal growth of Arabidopsis organs. Physiologia Plantarum 127: 157166.
  • Hebelstrup KH, Igamberdiev AU, Hill RD. 2007. Metabolic effects of hemoglobin gene expression in plants. Gene 398: 8693.
  • Higgins D, Thompson J, Gibson T, Thompson JD, Higgins DG, Gibson TJ. 1994. ClustalW: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Research 22: 46734680.
  • Hill RD. 1998. What are hemoglobins doing in plants? Canadian Journal of Botany 76: 707712.
  • Hunt PW, Watts RA, Trevaskis B, Llewelyn DJ, Burnell J, Dennis ES, Peacock WJ. 2001. Expression and evolution of functionally distinct haemoglobin genes in plants. Plant Molecular Biology 47: 677692.
  • Hunt PW, Klok EJ, Trevaskis B, Watts RA, Ellis MH, Peacock WJ, Dennis ES. 2002. Increased level of hemoglobin 1 enhances survival of hypoxic stress and promotes early growth in Arabidopsis thaliana. Proceedings of the National Academy of Sciences, USA 99: 1719717202.
  • Igamberdiev AU, Hill RD. 2004. Nitrate, NO and haemoglobin in plant adaptation to hypoxia: an alternative to classic fermentation pathways. Journal of Experimental Botany 55: 24732482.
  • Jackson MB, Colmer TD. 2005. Response and adaptation by plants to flooding stress. Annals of Botany 96: 501505.
  • Jacobsen-Lyon K, Jensen EOJ, Ørgensen JE, Marcker KA, Peacock WJ, Dennis ES. 1995. Symbiotic and nonsymbiotic hemoglobin genes of Casuarina glauca. Plant Cell 7: 213223.
  • Klok EJ, Wilson IW, Wilson D, Chapman SC, Ewing RM, Somerville SC, Peacock WJ, Dolferus R, Dennis ES. 2002. Expression profile analysis of the low-oxygen response in Arabidopsis root culture. Plant Cell 14: 24812494.
  • Larsen K. 2003. Molecular cloning and characterization of cDNAs encoding hemoglobin from wheat (Triticum aestivum) and potato (Solanum tuberosum). Biochimica et Biophysica Acta 1621: 299305.
  • Lasanthi-Kudahettige R, Magneschi L, Loreti E, Gonzali S, Licausi F, Novi G, Beretta O, Vitulli F, Alpi A, Perata P. 2007. Transcript profiling of the anoxic rice coleoptile. Plant Physiology 144: 218231.
  • Lévy G, Becker M, Duhamel D. 1992. A comparison of the ecology of pedunculate and sessile oak: radial growth in the centre and northeast of France. Forest Ecology and Management 55: 5163.
  • Lira-Ruan V, Sarath G, Klucas H, Arredondo-Peter R. 2001. Synthesis of hemoglobins in rice (Oryza sativa var. Jackson) plants growing in normal and stress conditions. Plant Science 161: 279287.
  • Liu F, Vantoai T, Moy L, Bock G, Linford LD, Quackenbush J. 2005. Global transcription profiling reveals novel insights into hypoxic response in Arabidopsis. Plant Physiology 137: 11151129.
  • Loreti E, Poggi A, Novi G, Alpi A, Perata P. 2005. Genome-wide analysis of gene expression in Arabidopsis seedlings under anoxia. Plant Physiology 137: 11301138.
  • Luan S, Kudla J, Rodriguez-Concepcion M, Yalovski S, Gruissem W. 2002. Calmodulins and calcineurin B-like proteins: calcium sensors for specific signal response coupling in plants. Plant Cell 14: S389S400.
  • Miyashita Y, Dolferus R, Ismond KP, Good AG. 2007. Alanine aminotransferase catalyses the breakdown of alanine after hypoxia in Arabidopsis thaliana. Plant Journal 49: 11081121.
  • Nie X, Hill RD. 1997. Mitochondrial respiration and hemoglobin gene expression in barley aleurone tissue. Plant Physiology 114: 835840.
  • Nie X, Singh RP, Tai GCC. 2002. Molecular characterization and expression analysis of 1-aminocyclopropane-1-carboxylate oxidase homologs from potato under abiotic and biotic stresses. Genome 45: 905913.
  • Nixon KC. 1993. Infrageneric classification of Quercus (Fagaceae) and typification of sectional names. Annales des Sciences Forestières 50: 25s34s.
  • Ota M, Isogay Y, Nishikawa K. 1997. Structural requirement of highly-conserved residues in globins. FEBS Letters 415: 129133.
  • Parelle J, Brendel O, Bodénès C, Berveiller D, Dizengremel P, Jolivet Y, Dreyer E. 2006. Differences in morphological and physiological responses to water-logging between two sympatric oak species (Quercus petraea [Matt.] Liebl., Quercus robur L.). Annales Des Sciences Forestières 63: 111.
  • Parelle J, Brendel O, Jolivet Y, Dreyer E. 2007. Intra- and interspecific diversity in the response to waterlogging of two co-occurring white oak species (Quercus robur and Q. petraea). Tree Physiology 27: 10271034.
  • Perazzolli M, Dominici P, Romero-Puertas MC, Zago E, Zeier J, Sonoda M, Lamb C, Delledonne M. 2004. Arabidopsis nonsymbiotic hemoglobin AHb1 modulates nitric oxide bioactivity. Plant Cell 16: 27852794.
  • Preney S, Bonvicini MP, Conche J. 1997. La récolte des glands de chêne pédonculé (Quercus robur L.) et de chêne sessile (Quercus petraea Liebl) à l’Office National des Forêts. ONF Bulletin Technique 33: 2132.
  • Qu ZL, Wang HY, Xia GX. 2005. GhHb1: a nonsymbiotic hemoglobin gene of cotton responsive to infection by Verticillium dahliae. Biochimica et Biophysica Acta 1730: 103113.
  • Ross EJH, Shearman L, Mathiesen M, Zhou YJ, Arredondo-Peter R, Sarath G, Klucas RV. 2001. Nonsymbiotic hemoglobins in rice are synthesized during germination and in differentiating cell types. Protoplasma 218: 125133.
  • Ross EJH, Lira-Ruan V, Arredondo-Peter R, Klucas RV, Sarath G. 2002. Recent insights into plant haemoglobins. Reviews in Plant Biochemistry and Biotechnology 1: 173189.
  • Saitou N, Nei M. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Molecular Biology and Evolution 4: 406425.
  • Sakamoto A, Sakurao SH, Fukunaga K, Matsubara T, Ueda-Hashimoto M, Tsukamoto S, Takahashi M, Morikawa H. 2004. Three distinct Arabidopsis hemoglobins exhibit peroxidase-like activity and differentially mediate nitrite-dependent protein nitration. FEBS Letters 572: 2732.
  • Semenza GL. 2004. Hydroxylation of HIF-1: oxygen sensing at the molecular level. Physiology 19: 176182.
  • Seregélyes C, Mustárdy L, Ayaydin F et al . 2000. Nuclear localization of a hypoxia-inducible novel non-symbiotic hemoglobin in cultured alfalfa cells. FEBS Letters 482: 125130.
  • Silva-Cardenas RI, Ricard B, Saglio P, Hill RD. 2003. Hemoglobin and hypoxic acclimation in maize root tips. Russian Journal of Plant Physiology 50: 821826.
  • Snedden WA, Fromm H. 1998. Calmodulin, calmodulin-related proteins and plant responses to the environment. Trends in Plant Science 3: 299304.
  • Stoflet ES, Koeberl DD, Sarkar G, Sommer SS. 1988. Genomic amplification with transcript sequencing. Science 239: 491494.
  • Subbaiah CC, Sachs MM. 2003. Molecular and cellular adaptations of maize to flooding stress. Annals of Botany 91: 119127.
  • Subbaiah CC, Bush DS, Sachs MM. 1998. Mitochondrial contribution to the anoxic Ca2+ signal suspension cultured cells. Plant Physiology 118: 759771.
  • Subbaiah CC, Kollipara KP, Sachs MM. 2000. A Ca2+-dependent cysteine protease is associated with anoxia-induced root tip death in maize. Journal of Experimental Botany 51: 721730.
  • Suzuki T, Imai K. 1998. Evolution of myoglobin. Cellular and Molecular Life Sciences 54: 9791004.
  • Taylor ER, Nie XZ, MacGregor AW, Hill RD. 1994. A cereal haemoglobin gene is expressed in seed and root tissues under anaerobic conditions. Plant Molecular Biology 24: 853862.
  • Trevaskis B, Watts RA, Andersson CR, Llewellyn DJ, Hargrove MS, Olson JS, Dennis ES, Peacock WJ. 1997. Two hemoglobin genes in Arabidopsis thaliana: The evolutionary origins of leghemoglobins. Proceedings of the National Academy of Sciences, USA 94: 1223012234.
  • Vartapetian BB, Jackson MB. 1997. Plant adaptations to anaerobic stress. Annals of Botany 79: 320.
  • Watts RA, Hunt PW, Hvitved AN, Hargrove MS, Peacock WJ, Dennis ES. 2001. A hemoglobin from plants homologous to truncated hemoglobins of microorganisms. Proceedings of the National Academy of Sciences, USA 98: 1011910124.
  • Weber RE, Vinogradov SN. 2001. Nonvertebrate hemoglobins: functions and molecular adaptations. Physiological Reviews 81: 569628.
  • Wendehenne D, Durner J, Klessig DF. 2004. Nitric oxide: a new player in plant signalling and defence responses. Current Opinion in Plant Biology 7: 449455.
  • Wittenberg JB, Wittenberg BA. 1990. Mechanisms of cytoplasmic hemoglobin and myoglobin function. Annual Review of Biophysics and Biophysical Chemistry 19: 217241.