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References

  • Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ. 1990. Basic Local Alignment Search Tool. Journal of Molecular Biology 215: 403410.
  • Andersson-Gunneras S, Mellerowicz EJ, Love J, Segerman B, Ohmiya Y, Coutinho PM, Nilsson P, Henrissat B, Moritz T, Sundberg B. 2006. Biosynthesis of cellulose-enriched tension wood in Populus: global analysis of transcripts and metabolites identifies biochemical and developmental regulators in secondary wall biosynthesis. Plant Journal 45: 144165.
  • APPITA. 1978. Australian standard: klason lignin in wood and pulp. Appita Journal 31: 1178.
  • Aufseß HV. 1973. Mikroskopische darstellung des verholzungsgrades durch färbemethoden. Holz als Roh-und Werkstoff 31: 2433.
  • Bedon F, Grima-Pettenati J, Mackay J. 2007. Conifer R2R3-MYB transcription factors: sequence analyses and gene expression in wood-forming tissues of white spruce (Picea glauca). Bmc Plant Biology 7: 17.
  • Brazma A, Hingamp P, Quackenbush J, Sherlock G, Spellman P. 2001. Minimum information about a microarray experiment (MIAME) – towards standards for microarray data. Nature Genetics 29: 365371.
  • Cave ID, Walker JCF. 1994. Stiffness of wood in fast-grown plantation softwoods: the influence of microfibril angle. Forest Products Journal 44: 4348.
  • Chaffey N. 2000. Microfibril orientation in wood cells: new angles on an old topic. Trends in Plant Science 5: 360362.
  • Cheng ZG, Snustad DP, Carter JV. 2001. Temporal and spatial expression patterns of TUB9, a beta-tubulin gene of Arabidopsis thaliana. Plant Molecular Biology 47: 389398.
  • Clair B, Ruelle J, Beauchene J, Prevost MF, Fournier M. 2006. Tension wood and opposite wood in 21 tropical rain forest species 1. Occurrence and efficiency of the G-layer. Iawa Journal 27: 329338.
  • Downes GM, Hudson IL, Raymond CA, Dean GH, Michell AJ, Schimleck LS, Evans R, Muneri A. 1997. Sampling plantation eucalypts for wood and fibre properties. Melbourne, Australia: CSIRO Publishing.
  • Evans R, Ilic J. 2001. Rapid prediction of wood stiffness from microfibril angle and density. Forest Products Journal 51: 5357.
  • Fisher JB, Stevenson JW. 1981. Occurrence of reaction wood in branches of dicotyledons and its role in tree architecture. Botanical Gazette 142: 8295.
  • Gahan PB. 1984. Plant histochemistry and cytochemistry. New York, NY, USA: Academic Press.
  • Gardiner JC, Taylor NG, Turner SR. 2003. Control of cellulose synthase complex localization in developing xylem. Plant Cell 15: 17401748.
  • Geisler-Lee J, Geisler M, Coutinho PM, Segerman B, Nishikubo N, Takahashi J, Aspeborg H, Djerbi S, Master E, Andersson-Gunneras S et al . 2006. Poplar carbohydrate-active enzymes. Gene identification and expression analyses. Plant Physiology 140: 946962.
  • Gierlinger N, Schwanninger M. 2006. Chemical imaging of poplar wood cell walls by confocal Raman microscopy. Plant Physiology 140: 12461254.
  • Gurr E. 1960. Encyclopaedia of microscopic stains. London, UK: Leonard Hill Books.
  • Hegde P, Qi R, Abernathy K, Gay C, Dharap S, Gaspard R, Hughes JE, Snesrud E, Lee N, Quackenbush J. 2000. A concise guide to cDNA microarray analysis. Biotechniques 29: 548562.
  • Ito S, Suzuki Y, Miyamoto K, Ueda J, Yamaguchi I. 2005. AtFLA11, a fasciclin-like arabinogalactan-protein, specifically localized in screlenchyma cells. Bioscience Biotechnology and Biochemistry 69: 19631969.
  • Johnson KL, Jones BJ, Bacic A, Schultz CJ. 2003. The fasciclin-like arabinogalactan proteins of Arabidopsis. A multigene family of putative cell adhesion molecules. Plant Physiology 133: 19111925.
  • Koutaniemi S, Warinowski T, Karkonen A, Alatalo E, Fossdal CG, Saranpaa P, Laakso T, Fagerstedt KV, Simola LK, Paulin L et al . 2007. Expression profiling of the lignin biosynthetic pathway in Norway spruce using EST sequencing and real-time RT-PCR. Plant Molecular Biology 65: 311328.
  • Kumar S, Tamura K, Nei M. 2004. MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Briefings in Bioinformatics 5: 150163.
  • Lafarguette F, Leple JC, Dejardin A, Laurans F, Costa G, Lesage-Descauses MC, Pilate G. 2004. Poplar genes encoding fasciclin-like arabinogalactan proteins are highly expressed in tension wood. New Phytologist 164: 107121.
  • Lloyd CW, Himmelspach R, Nick P, Wymer C. 2000. Cortical microtubules form a dynamic mechanism that helps regulate the direction of plant growth. Gravitational and Space Biology Bulletin 13: 5965.
  • Loopstra CA, Sederoff RR. 1995. Xylem-specific gene expression in loblolly pine. Plant Molecular Biology 27: 277291.
  • Loopstra CA, Puryear JD, No EG. 2000. Purification and cloning of an arabinogalactan-protein from xylem of loblolly pine. Planta 210: 686689.
  • Macfarlane C, Warren CM, White DA, Adams MA. 1999. A rapid and simple method for processing wood to crude cellulose for analysis of stable carbon isotopes in tree-rings. Tree Physiology 19: 831835.
  • Mellerowicz EJ, Baucher M, Sundberg B, Boerjan W. 2001. Unravelling cell wall formation in the woody dicot stem. Plant Molecular Biology 47: 239274.
  • Nishikubo N, Awano T, Banasiak A, Bourquin V, Ibatullin F, Funada R, Brumer H, Teeri TT, Hayashi T, Sundberg B et al . 2007. Xyloglucan endo-transglycosylase (XET) functions in gelatinous layers of tension wood fibers in poplar – a glimpse into the mechanism of the balancing act of trees. Plant & Cell Physiology 48: 843855.
  • Nothnagel EA. 1997. Proteoglycans and related components in plant cells. International Review of Cytology 174: 195119.
  • Paredez AR, Somerville CR, Ehrhardt DW. 2006. Visualization of cellulose synthase demonstrates functional association with microtubules. Science 312: 14911495.
  • Paux E, Carocha V, Marques C, De Sousa AM, Borralho N, Sivadon P, Grima-Pettenati J. 2005. Transcript profiling of Eucalyptus xylem genes during tension wood formation. New Phytologist 167: 89100.
  • Persson S, Wei HR, Milne J, Page GP, Somerville CR. 2005. Identification of genes required for cellulose synthesis by regression analysis of public microarray data sets. Proceedings of the National Academy of Sciences, USA 102: 86338638.
  • Pilate G, Dejardin A, Laurans F, Leple JC. 2004. Tension wood as a model for functional genomics of wood formation. New Phytologist 164: 6372.
  • Plomion C, Pionneau C, Brach J, Costa P, Bailleres H. 2000. Compression wood-responsive proteins in developing xylem of maritime pine (Pinus pinaster Ait.). Plant Physiology 123: 959969.
  • Prodhan A, Ohtani J, Funada R, Abe H, Fukazawa K. 1995. Ultrastructural investigation of tension wood fiber in Fraxinus mandshurica Rupr Var Japonica Maxim. Annals of Botany 75: 311317.
  • Ranik M, Myburg AA. 2006. Six new cellulose synthase genes from Eucalyptus are associated with primary and secondary cell wall biosynthesis. Tree Physiology 26: 545556.
  • Richards KL, Anders KR, Nogales E, Schwartz K, Downing KH, Botstein D. 2000. Structure–function relationships in yeast tubulins. Molecular Biology of the Cell 11: 18871903.
  • Sambrook J, Fritsch EF, Maniatis T. 1989. Molecular cloning: a laboratory manual. Cold Spring Harbor, NY, USA: Cold Spring Harbor Laboratory.
  • Schenk PM, Kazan K, Wilson I, Anderson JP, Richmond T, Somerville SC, Manners JM. 2000. Coordinated plant defense responses in Arabidopsis revealed by microarray analysis. Proceedings of the National Academy of Sciences, USA 97: 1165511660.
  • Scurfield G, Wardrop AB. 1962. The nature of reaction wood; the reaction anatomy of seedlings of woody perennials. Australian Journal of Botany 10: 93105.
  • Seifert GJ, Roberts K. 2007. The biology of arabinogalactan proteins. Annual Review of Plant Biology 58: 137161.
  • Smyth GK. 2005. Limma: linear models for microarray data. In: GentlemanR, CareyV, DudoitS, IrizarryR, HuberW, eds. Bioinformatics and computational biology solutions using R and Bioconductor. New York, NY, USA: Springer, 397420.
  • Smyth GK, Speed T. 2003. Normalization of cDNA microarray data. Methods 31: 265273.
  • Southerton SG, Marshall H, Mouradov A, Teasdale RD. 1998. Eucalypt MADS-box genes expressed in developing flowers. Plant Physiology 118: 365372.
  • Spokevicius AV, Southerton SG, MacMillan CP, Qiu D, Gan S, Tibbits JFG, Moran GF, Bossinger B. 2007. Beta-tubulin affects cellulose microfibril orientation in plant secondary fibre cell walls. Plant Journal 51: 717726.
  • Sterky F, Regan S, Karlsson J, Hertzberg M, Rohde A, Holmberg A, Amini B, Bhalerao R, Larsson M, Villarroel R et al . 1998. Gene discovery in the wood-forming tissues of poplar: analysis of 5692 expressed sequence tags. Proceedings of the National Academy of Sciences, USA 95: 1333013335.
  • Thompson JD, Higgins DG, Gibson TJ. 1994. clustal w– improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Research 22: 46734680.
  • Timell TE. 1986. Compression wood in gymnosperms. Berlin, Germany: Springer-Verlag.
  • Wardrop AB. 1964. The formation of wood in forest trees. In: ZimmermannMH, ed. New York, NY, USA: Academic Press, 405456.
  • Washusen R, Evans R, Southerton S. 2005. A study of Eucalyptus grandis and Eucalyptus globulus branch wood microstructure. Iawa Journal 26: 203210.
  • Whetten R, Sun YH, Zhang Y, Sederoff R. 2001. Functional genomics and cell wall biosynthesis in loblolly pine. Plant Molecular Biology 47: 275291.
  • Wilson K, White DJB. 1986. Reaction wood: its structure, properties and functions. In: WilsonK, WhiteDJB, eds. The anatomy of wood: its diversity and variability. London, UK: Stobart and Son Ltd, 222250.