Retrotransposons and siRNA have a role in the evolution of desiccation tolerance leading to resurrection of the plant Craterostigma plantagineum
Article first published online: 13 MAY 2008
© The Authors (2008). Journal compilation © New Phytologist (2008)
Volume 179, Issue 3, pages 877–887, August 2008
How to Cite
Hilbricht, T., Varotto, S., Sgaramella, V., Bartels, D., Salamini, F. and Furini, A. (2008), Retrotransposons and siRNA have a role in the evolution of desiccation tolerance leading to resurrection of the plant Craterostigma plantagineum. New Phytologist, 179: 877–887. doi: 10.1111/j.1469-8137.2008.02480.x
- Issue published online: 15 JUL 2008
- Article first published online: 13 MAY 2008
- Received: 15 February 2008 Accepted: 10 March 2008
- 2004. Modulation of floral development by a gibberellin-regulated microRNA. Development 13: 3357–3365. , , , .
- 2001. (International Human Genome Sequencing Consortium) Initial sequencing and analysis of the human genome. Nature 409: 860–912. , , , , , , , , , et al .
- 2004. MicroRNAs: genomic, biogenesis, mechanism, and function. Cell 116: 281–297. .
- 2001. Desiccation tolerance in the resurrection plant Craterostigma plantagineum. A contribution to the study of drought tolerance at molecular level. Plant Physiology 127: 1346–1353. ,
- 1990. Molecular cloning of abscisic acid modulated genes which are induced during desiccation of the resurrection plant Craterostigma plantagineum. Planta 181: 27–34. , , , ,
- 2001. Three Tnt1 subfamilies show different stress-associated patterns of expression in tobacco. Consequences for retrotransposon control and evolution in plants. Plant Physiology 127: 212–221. , , , .
- 1995. The transketolase gene family of the resurrection plant Craterostigma plantagineum: differential expression during the rehydration phase. EMBO Journal 14: 610–618. , , , ,
- 2003. The contribution of RNAs and retroposition to evolutionary novelties. Genetica 118: 99–116.
- 1995. The spirit of system: Lamarck and evolutionary biology. Cambridge, MA, USA: Harvard University Press. .
- 2005. DICER-LIKE 4 is required for RNA interference and produces the 21-nucleotide small interfering RNA component of the plant cell-to-cell silencing signal. Nature Genetics 37: 1356–1360. , ,
- 2002. Plant transposable elements: where genetics meets genomics. Nature Reviews Genetics 3: 329–341. , , .
- 1994. Agrobacterium-mediated transformation of the desiccation tolerant plant Craterostigma plantagineum. Plant Cell Reports 14: 102–106. , , ,
- 1997. High level transcription of a member of a repeated gene family confers dehydration tolerance to callus tissue of Craterostigma plantagineum. EMBO Journal 16: 3599–3608. , , ,
- 2002. Two classes of short interfering RNA in RNA silencing. EMBO Journal 21: 4671–4679. , , , .
- 1999. A species of small antisense RNA in posttranscriptional gene silencing in plants. Science 286: 950–952. , .
- 2003. Transitivity-dependent and -independent cell-to-cell movement of RNA silencing. EMBO Journal 22: 4523–4533. , , , ,
- 2003. An expressed pseudogene regulates the messenger-RNA stability of its homologous coding gene. Nature 423: 91–100. , , , , , , , ,
- 2000. Genome evolution of wild barley (Hordeum spontaneum) by BARE-1 retrotransposon dynamics in response to sharp microclimatic divergence. Proceedings of the National Academy of Sciences, USA 97: 6603–6607. , , , ,
- 1975. Nutritional requirements for growth of Vicia hajastana cells and protoplasts at very low population density in liquid media. Planta 126: 105–110. , .
- 2003. Transcriptional activation of retrotransposons alters the expression of adjacent genes in wheat. Nature Genetics 33: 102–106. , ,
- 1991. T-DNA gene 5 of Agrobacterium modulates auxin response by autoregulated synthesis of a growth hormone antagonist in plants. EMBO Journal 10: 3983–3991. , , , , , , , ,
- 1994. Specialized vectors for gene tagging and expression studies. In: GelvinSB, SchilperoortRA, VermaDPS, eds. Plant molecular biology manual. Dordrecht, the Netherlands: Kluwer Academic Publishers, B2, 1–22. , , , , ,
- 1986. The promoter of the TL-DNA gene 5 controls the tissue-specific expression of chimeric genes carried by a novel type of Agrobacterium binary vector. Molecular and General Genetics 204: 383–396. ,
- 1999. Neuronal expression of neural nitric oxide synthase (nNOS) protein is suppressed by an antisense RNA transcribed from an NOS pseudogene. Journal of Neuroscience 19: 7711–7722. , ,
- 2002. RNAi functions in cultured mammalian neurons. Proceedings of the National Academy of Sciences, USA 99: 11926–11929. , .
- 1999. Plant retrotransposons. Annual Review of Genetics 33: 479–532. , .
- 1801, 1802. Discours donné dans le Muséum National d’Histoire Naturelle, l’an VIII de la République. Bulletin Scientifique de la France et de la Belgique 40: 443–595. .
- 2000. Retrotransposon activation followed by rapid repression in introgressed rice plants. Genome 43: 874–880. , .
- 2001. Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) method. Methods 25: 402–408. , .
- 2006. Functions of microRNAs and related small RNAs in plants. Nature Genetics Supplement l 38: S31–36. ,
- 2000. Transcriptional silencing and promoter methylation triggered by double-stranded RNA. EMBO Journal 19: 5194–5201. , , , , .
- 1997. The promoter of the tobacco Tnt1 retrotransposon is induced by wounding and by abiotic stresses. Plant Molecular Biology 33: 257–266. , , , , , .
- 2002. Many human genes are transcribed from the antisense promoter of L1 retrotransposon. Genomics 79: 628–634. , , ,
- 2004. Dissecting RNA silencing in protoplasts uncovers novel effects of viral suppressors on the silencing pathway at the cellular level. Nucleic Acids Research 32: e179. , , ,
- 2001. The MuDR transposon terminal inverted repeat contains a complex plant promoter directing distincting somatic and germinal programs. Plant Journal 25: 79–91. , ,
- 2005. Identification of further Craterostigma plantagineum cdt mutants affected in abscisic acid mediated desiccation tolerance. Molecular and General Genetics 274: 364–372. , , ,
- 1999. A 13-bp cis-regulatory element in the LTR promoter of the tobacco retrotransposon Tto1 is involved in responsiveness to tissue culture, wounding, methyl jasmonate and fungal elicitors. Plant Journal 18:383–393. , , ,
- 2003. Short interfering RNA-mediated interference of gene expression and viral DNA accumulation in cultured plant cells Proceedings of the National Academy of Sciences, USA 100: 9632–9636. , , .
- 2003. Expression profile and cellular localization of maize Rpd3-type histone deacetylases during plant development. Plant Physiology 133: 606–617. , , , , ,
- 2001. Active retrotrasposons are a common feature of grass genomes. Plant Physiology 125: 1283–1292. , , , .
- 2004. Shaping small RNAs in plants by gene duplication. Nature Genetics 36: 1245–1246.
- 1997. Systemic signalling in gene silencing. Nature 389: 553. , .
- 1998. Systemic spread of sequence-specific transgene RNA degradation in plants is initiated by localized introduction of ectopic promoterless DNA. Cell 95: 177–187. , , , .
- 1989. Efficient transformation of Agrobacterium spp. by high voltage electroporation. Nucleic Acids Research 17: 8385. , .
- 2001. Retrotransposons as epigenetic mediators of phenotypic variation in mammals. Nature Genetics 27: 361–365. ,
- 2003. Empirical analysis of transcriptional activity in the Arabidopsis genome. Science 302: 842–846. , , , , , , , , , et al .
- 2005. A pathway for the biogenesis of trans-acting siRNAs in Arabidopsis. Genes and Development 19: 2164–2175. , , , .