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References

  • Allan AC, Hellens RP, Laing WA. 2008. MYB transcription factors that colour our fruit. Trends in Plant Science 13: 99102.
  • Allen JW, Shachar-Hill Y. 2009. Sulfur transfer through an arbuscular mycorrhiza. Plant Physiology 149: 549560.
  • Balestrini R, Bonfante P. 2005. The interface compartment in arbuscular mycorrhizae: a special type of plant cell wall? Plant Biosystems 139: 815.
  • Balestrini R, Gomez-Ariza J, Lanfranco L, Bonfante P. 2007. Laser microdissection reveals that transcripts for five plant and one fungal phosphate transporter genes are contemporaneously present in arbusculated cells. Molecular Plant–Microbe Interactions 20: 10551062.
  • Berta G, Trotta A, Fusconi A, Hooker JE, Munro M, Atkinson D, Giovannetti M, Morini S, Fortuna P, Tisserant B et al . 1995. Arbuscular mycorrhizal induced changes to plant-growth and root-system morphology in Prunus cerasifera. Tree Physiology 15: 281293.
  • Bock JB, Matern HT, Peden AA, Scheller RH. 2001. A genomic perspective on membrane compartment organization. Nature 409: 839841.
  • Bonfante P. 2001. At the interface between mycorrhizal fungi and plants: the structural organization of cell wall, plasma membrane and cytoskeleton. In: Hock B, ed. The mycota IX. Berlin, Germany: Springer-Verlag, 4561.
  • Bonfante P, Genre A, Faccio A, Martini I, Schauser L, Stougaard J, Webb J, Parniske M. 2000. The Lotus japonicus LjSym4 gene is required for the successful symbiotic infection of root epidermal cells. Molecular Plant–Microbe Interactions 13: 11091120.
  • Brechenmacher L, Weidmann S, van Tuinen D, Chatagnier O, Gianinazzi S, Franken P, Gianinazzi-Pearson V. 2004. Expression profiling of up-regulated plant and fungal genes in early and late stages of Medicago truncatula-Glomus mosseae interactions. Mycorrhiza 14: 253262.
  • Bucher M. 2007. Functional biology of plant phosphate uptake at root and mycorrhiza interfaces. New Phytologist 173: 1126.
  • Cappellazzo G, Lanfranco L, Fitz M, Wipf D, Bonfante P. 2008. Characterization of an amino acid permease from the endomycorrhizal fungus Glomus mosseae. Plant Physiology 147: 429437.
  • Chang S, Puryear J, Cairney J. 1993. Simple and efficient method for isolating RNA from pine trees. Plant Molecular Biolology Report 11: 113116.
  • Colebatch G, Desbrosses G, Ott T, Krusell L, Montanari O, Kloska S, Kopka J, Udvardi MK. 2004. Global changes in transcription orchestrate metabolic differentiation during symbiotic nitrogen fixation in Lotus japonicus. Plant Journal 39: 487512.
  • Collins NC, Thordal-Christensen H, Lipka V, Bau S, Kombrink E, Qiu JL, Huckelhoven R, Stein M, Freialdenhoven A, Somerville SC et al . 2003. SNARE-protein-mediated disease resistance at the plant cell wall. Nature 425: 973977.
  • Deguchi Y, Banba M, Shimoda Y, Chechetka SA, Suzuri R, Okusako Y, Ooki Y, Toyokura K, Suzuki A, Uchiumi T et al . 2007. Transcriptome profiling of Lotus japonicus roots during arbuscular mycorrhiza development and comparison with that of nodulation. DNA Research 14: 117133.
  • Devoto A, Piffanelli P, Nilsson I, Wallin E, Panstruga R, von Heijne G, Schulze-Lefert P. 1999. Topology, subcellular localization, and sequence diversity of the Mlo family in plants. Journal of Biological Chemistry 274: 3499335004.
  • Dolan L. 2007. Plant science. SCARECROWs at the border. Science 316: 377378.
  • Duplessis S, Courty PE, Tagu D, Martin F. 2005. Transcript patterns associated with ectomycorrhiza development in Eucalyptus globulus and Pisolithus microcarpus. New Phytologist 165: 599611.
  • Freialdenhoven A, Peterhansel C, Kurth J, Kreuzaler F, Schulze-Lefert P. 1996. Identification of genes required for the function of nonrace-specific mlo resistance to powdery mildew in barley. Plant Cell 8: 514.
  • Frenzel A, Manthey K, Perlick AM, Meyer F, Puhler A, Kuster H, Krajinski F. 2005. Combined transcriptome profiling reveals a novel family of arbuscular mycorrhizal-specific Medicago truncatula lectin genes. Molecular Plant–Microbe Interactions 18: 771782.
  • Gautier L, Cope L, Bolstad BM, Irizarry RA. 2004. affy – analysis of Affymetrix GeneChip data at the probe level. Bioinformatics 20: 307315.
  • Genre A, Chabaud M, Faccio A, Barker DG, Bonfante P. 2008. Prepenetration apparatus assembly precedes and predicts the colonization patterns of arbuscular mycorrhizal fungi within the root cortex of both Medicago truncatula and Daucus carota. Plant Cell 20: 14071420.
  • Genre A, Chabaud M, Timmers T, Bonfante P, Barker DG. 2005. Arbuscular mycorrhizal fungi elicit a novel intracellular apparatus in Medicago truncatula root epidermal cells before infection. Plant Cell 17: 34893499.
  • Gentleman RC, Carey VJ, Bates DM, Bolstad B, Dettling M, Dudoit S, Ellis B, Gautier L, Ge YC, Gentry J et al . 2004. Bioconductor: open software development for computational biology and bioinformatics. Genome Biology 5: R80.1R80.16.
  • Giovannetti M, Sbrana C, Avio L, Citernesi AS, Logi C. 1993. Differential hyphal morphogenesis in arbuscular mycorrhizal fungi during pre-infection stages. New Phytologist 125: 587593.
  • Govindarajulu M, Pfeffer PE, Jin H, Abubaker J, Douds DD, Allen JW, Bucking H, Lammers PJ, Shachar-Hill Y. 2005. Nitrogen transfer in the arbuscular mycorrhizal symbiosis. Nature 435: 819823.
  • Green JR, Carver TLW, Gurr SJ. 2002. The formation and function of infection and feeding structures. In: Belanger RR, Bushnell WR, Dik AJ, Carver TLW, eds. The powdery mildews: a comprehensive treatise. St Paul, MN, USA: American Phytopathological Society Press, 6682.
  • Güimil S, Chang HS, Zhu T, Sesma A, Osbourn A, Roux C, Ionnidis V, Oakeley EJ, Docquier M, Descombes P et al . 2005. Comparative transcriptomics of rice reveals an ancient pattern of response to microbial colonization. Proceedings of the National Academy of Sciences, USA 102: 80668070.
  • Harrison MJ. 2005. Signaling in the arbuscular mycorrhizal symbiosis. Annual Review of Microbiology 59: 1942.
  • Harrison MJ, Dewbre GR, Liu J. 2002. A phosphate transporter from Medicago truncatula involved in the acquisition of phosphate released by arbuscular mycorrhizal fungi. Plant Cell 14: 24132429.
  • Heller G, Adomas A, Li G, Osborne J, van Zyl L, Sederoff R, Finlay RD, Stenlid J, Asiegbu FO. 2008. Transcriptional analysis of Pinus sylvestris roots challenged with the ectomycorrhizal fungus Laccaria bicolor. BMC Plant Biology 8: 19.
  • Hewitt EJ. 1966. Sand and water culture methods used in the study of plant nutrition. Farnham Royal, UK: Commonwealth Agricultural Bureaux.
  • Hochholdinger F, Zimmermann R. 2008. Conserved and diverse mechanisms in root development. Current Opinion in Plant Biology 11: 7074.
  • Hohnjec N, Vieweg ME, Puhler A, Becker A, Kuster H. 2005. Overlaps in the transcriptional profiles of Medicago truncatula roots inoculated with two different Glomus fungi provide insights into the genetic program activated during arbuscular mycorrhiza. Plant Physiology 137: 12831301.
  • Irizarry RA, Hobbs B, Collin F, Beazer-Barclay YD, Antonellis KJ, Scherf U, Speed TP. 2003. Exploration, normalization, and summaries of high density oligonucleotide array probe level data. Biostatistics 4: 249264.
  • Jarosch B, Jansen M, Schaffrath U. 2003. Acquired resistance functions in mlo barley, which is hypersusceptible to Magnaporthe grisea. Molecular Plant–Microbe Interactions 16: 107114.
  • Javot H, Penmetsa RV, Terzaghi N, Cook DR, Harrison MJ. 2007a. A Medicago truncatula phosphate transporter indispensable for the arbuscular mycorrhizal symbiosis. Proceedings of the National Academy of Sciences, USA 104: 17201725.
  • Javot H, Pumplin N, Harrison MJ. 2007b. Phosphate in the arbuscular mycorrhizal symbiosis: transport properties and regulatory roles. Plant, Cell & Environment 30: 310322.
  • Karim S, Holmstrom KO, Mandal A, Dahl P, Hohmann S, Brader G, Palva ET, Pirhonen M. 2007. AtPTR3, a wound-induced peptide transporter needed for defence against virulent bacterial pathogens in Arabidopsis. Planta 225: 14311445.
  • Kistner C, Winzer T, Pitzschke A, Mulder L, Sato S, Kaneko T, Tabata S, Sandal N, Stougaard J, Webb KJ et al . 2005. Seven Lotus japonicus genes required for transcriptional reprogramming of the root during fungal and bacterial symbiosis. Plant Cell 17: 22172229.
  • Laajanen K, Vuorinen I, Salo V, Juuti J, Raudaskoski M. 2007. Cloning of Pinus sylvestris SCARECROW gene and its expression pattern in the pine root system, mycorrhiza and NPA-treated short roots. New Phytologist 175: 230243.
  • Le Quere A, Wright DP, Soderstrom B, Tunlid A, Johansson T. 2005. Global patterns of gene regulation associated with the development of ectomycorrhiza between birch (Betula pendula Roth.) and Paxillus involutus (Batsch) Fr. Molecular Plant–Microbe Interactions 18: 659673.
  • Leigh J, Hodge A, Fitter AH. 2009. Arbuscular mycorrhizal fungi can transfer substantial amounts of nitrogen to their host plant from organic material. New Phytologist 181: 199207.
  • Liu JY, Blaylock LA, Endre G, Cho J, Town CD, VandenBosch KA, Harrison MJ. 2003. Transcript profiling coupled with spatial expression analyses reveals genes involved in distinct developmental stages of an arbuscular mycorrhizal symbiosis. Plant Cell 15: 21062123.
  • Liu J, Maldonado-Mendoza I, Lopez-Meyer M, Cheung F, Town CD, Harrison MJ. 2007. Arbuscular mycorrhizal symbiosis is accompanied by local and systemic alterations in gene expression and an increase in disease resistance in the shoots. Plant Journal 50: 529544.
  • Maeda D, Ashida K, Iguchi K, Chechetka SA, Hijikata A, Okusako Y, Deguchi Y, Izui K, Hata S. 2006. Knockdown of an arbuscular mycorrhiza-inducible phosphate transporter gene of Lotus japonicus suppresses mutualistic symbiosis. Plant and Cell Physiology 47: 807817.
  • Manthey K, Krajinski F, Hohnjec N, Firnhaber C, Puhler A, Perlick AM, Kuster H. 2004. Transcriptome profiling in root nodules and arbuscular mycorrhiza identifies a collection of novel genes induced during Medicago truncatula root endosymbioses. Molecular Plant–Microbe Interactions 17: 10631077.
  • Martin F, Kohler A, Duplessis S. 2007. Living in harmony in the wood underground: ectomycorrhizal genomics. Current Opinion in Plant Biology 10: 204210.
  • Novero M, Faccio A, Genre A, Stougaard J, Webb KJ, Mulder L, Parniske M, Bonfante P. 2002. Dual requirement of the LjSym4 gene for mycorrhizal development in epidermal and cortical cells of Lotus japonicus roots. New Phytologist 154: 741749.
  • Olah B, Briere C, Becard G, Denarie J, Gough C. 2005. Nod factors and a diffusible factor from arbuscular mycorrhizal fungi stimulate lateral root formation in Medicago truncatula via the DMI1/DMI2 signalling pathway. Plant Journal 44: 195207.
  • Osmont KS, Sibout R, Hardtke CS. 2007. Hidden branches: developments in root system architecture. Annual Review of Plant Biology 58: 93113.
  • Parniske M. 2008. Arbuscular mycorrhiza: the mother of plant root endosymbioses. Nature Reviews. Microbiology 6: 763775.
  • Ririe KM, Rasmussen RP, Wittwer CT. 1997. Product differentiation by analysis of DNA melting curves during the polymerase chain reaction. Analytical Biochemistry 245: 154160.
  • Salvioli A, Luimini E, Anca IA, Bianciotto V, Bonfante P. 2008. Simultaneous detection and quantification of the unculturable microbe Candidatus Glomeribacter gigasporarum inside its fungal host Gigaspora margarita. New Phytologist 180: 248257.
  • Sanchez DH, Lippold F, Redestig H, Hannah MA, Erban A, Kramer U, Kopka J, Udvardi MK. 2008. Integrative functional genomics of salt acclimatization in the model legume Lotus japonicus. Plant Journal 53: 973987.
  • Sato S, Nakamura Y, Kaneko T, Asamizu E, Kato T, Nakao M, Sasamoto S, Watanabe A, Ono A, Kawashima K et al . 2008. Genome structure of the legume Lotus japonicus. DNA Research 15: 227239.
  • Schußler A, Schwarzott D, Walker C. 2001. A new fungal phylum, the Glomeromycota: phylogeny and evolution. Mycological Research 105: 14131421.
  • Siciliano V, Genre A, Balestrini R, Cappellazzo G, Dewit PJGM, Bonfante P. 2007. Transcriptome analysis of arbuscular mycorrhizal roots during development of the prepenetration apparatus. Plant Physiology 144: 14551466.
  • Smith SE, Read DJ. 2008. Mycorrhizal symbiosis. London, UK: Academic.
  • Smyth GK. 2004. Linear models and empirical Bayes methods for assessing differential expression in microarray experiments. Statistical Applications in Genetics and Molecular Biology. 3: Article3.
  • Tamura K, Dudley J, Nei M, Kumar S. 2007. MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Molecular Biology and Evolution 24: 15961599.
  • Taylor NG. 2008. Cellulose biosynthesis and deposition in higher plants. New Phytologist 178: 239252.
  • Trouvelot A, Kough JL, Gianinazzi-Pearson V. 1986. Mesure du taux de mycorhization VA d’un système radiculaire. In: Gianinazzi-Pearson V, Gianinazzi S, eds. Recherche de méthodes d’estimation ayant une signification fonctionnelle. Proceedings of the 1st ESM. Paris, France: INRA Press, 217221.
  • Udvardi MK, Kakar K, Wandrey M, Montanari O, Murray J, Andriankaja A, Zhang JY, Benedito V, Hofer JMI, Chueng F et al . 2007. Legume transcription factors: global regulators of plant development and response to the environment. Plant Physiology 144: 538549.
  • Usadel B, Nagel A, Thimm O, Redestig H, Blaesing OE, Palacios-Rojas N, Selbig J, Hannemann J, Piques MC, Steinhauser D et al . 2005. Extension of the visualization tool MapMan to allow statistical analysis of arrays, display of coresponding genes, and comparison with known responses. Plant Physiology 138: 11951204.
  • Wulf A, Manthey K, Doll J, Perlick AM, Linke B, Bekel T, Meyer F, Franken P, Kuster H, Krajinski F. 2003. Transcriptional changes in response to arbuscular mycorrhiza development in the model plant Medicago truncatula. Molecular Plant–Microbe Interactions 16: 306314.
  • Zuker M. 2003. Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Research 31: 34063415.