SEARCH

SEARCH BY CITATION

References

  • Agarwal P , Agarwal P , Reddy M , Sopory S. 2006 . Role of DREB transcription factors in abiotic and biotic stress tolerance in plants . Plant Cell Reports 25 : 12631274 .
  • Ainsworth EA , Long SP . 2005 . What have we learned from 15 years of free-air CO2 enrichment (FACE)? A meta-analytic review of the responses of photosynthesis, canopy . New Phytologist 165 : 351371 .
  • Ainsworth EA , Rogers A. 2007 . The response of photosynthesis and stomatal conductance to rising [CO2]: mechanisms and environmental interactions . Plant, Cell & Environment 30 : 258270 .
  • Ainsworth EA , Rogers A , Leakey ADB , Heady LE , Gibon Y , Stitt M , Schurr U. 2007 . Does elevated atmospheric [CO2] alter diurnal C uptake and the balance of C and N metabolites in growing and fully expanded soybean leaves? Journal of Experimental Botany 58 : 579591 .
  • Allison DB , Page G , Beasley TM , Edwards JW . 2006 . DNA microarrays and related genomics techniques . Boca Raton, FL, USA : Chapman and Hall/CRC Taylor and Francis Group .
  • Brosché M , Vinocur B , Alatalo ER , Lamminmaki A , Teichmann T , Ottow EA , Djilianov D , Afif D , Bogeat-Triboulot MB , Altman A et al . 2005 . Gene expression and metabolite profiling of Populus euphratica growing in the Negev desert . Genome Biology 6 : R101 .
  • Brown S. 2002 . Measuring carbon in forests: current status and future challenges . Environmental Pollution 116 : 36372 .
  • Calfapietra C , Wiberly AE , Falbel TG , Linskey AR , Mugnozza GS , Karnosky DF , Loreto F , Sharkey TD . 2007 . Isoprene synthase expression and protein levels are reduced under elevated O3 but not under elevated CO2 (FACE) in field-grown trees . Plant, Cell & Environment 30 : 654661 .
  • Churchill GA . 2002 . Fundamentals of experimental design for cDNA microarrays . Nature Genetics Supplement 32 : 490495 .
  • Cox SE . 2005 . Elevational gradient of neoformed shoot growth in Populus tremuloides . Canadian Journal of Botany-Revue Canadienne de Botanique 83 : 13401344 .
  • Cross JM , von Korff M , Altmann T , Bartzetko L , Sulpice R , Gibon Y , Palacios N , Stitt M. 2006 . Variation of enzyme activities and metabolite levels in 24 Arabidopsis accessions growing in carbon-limited conditions . Plant Physiology 142 : 15741588 .
  • Cseke LJ , Ravinder N , Pandey AK , Podila GK . 2007 . Identification of PTM5 protein interaction partners, a MADS-box gene involved in aspen tree vegetative development . Gene 391 : 209222 .
  • Deckmyn G , Muys B , Quijano JG , Ceulemans R. 2004 . Carbon sequestration following afforestation of agricultural soils: comparing oak/beech forest to short-rotation poplar coppice combining a process and a carbon accounting model . Global Change Biology 10 : 14821491 .
  • Déjardin A , Leple JC , Lesage-Descauses MC , Costa G , Pilate G. 2004 . Expressed sequence tags from poplar wood tissues – a comparative analysis from multiple libraries . Plant Biology 6 : 5564 .
  • Dickson RE , Coleman MD , Pechter P , Karnosky DF . 2001 . Growth and crown architecture of two aspen genotypes exposed to interacting ozone and carbon dioxide . Environmental Pollution 115 : 319334 .
  • Druart N , Rodríguez-Buey M , Barron-Gafford G , Sjödin A , Bhalerao R , Hurry V. 2006 . Molecular targets of elevated [CO2] in leaves and stems of Populus deltoides: implications for future tree growth and carbon sequestration . Functional Plant Biology 33 : 121131 .
  • Eamus D , Ceulemans R. 2001 . Effects of greenhouse gases on the gas exchange of forest trees . In : Karnosky DF , Ceulemans R , Scarascia-Mugnozza GE , Innes JL , eds . The impact of CO2 and other greenhouse gases on forest ecosystems . Wallingford, Oxfordshire, UK : CABI Publishing , 1756 .
  • Fluch S , Olmo CC , Tauber S , Stierschneider M , Kopecky D , Reichenauer TG , Matusíková I. 2008 . Transcriptomic changes in wind-exposed poplar leaves are dependent on developmental stage . Planta 228 : 757764 .
  • Gupta P , Duplessis S , White H , Karnosky DF , Martin F , Podila GK . 2005 . Gene expression patterns of trembling aspen trees following long-term exposure to interacting elevated CO2 and tropospheric O3 . New Phytologist 167 : 12941 .
  • Hyvönen R , Agren GI , Linder S , Persson T , Cotrufo MF , Ekblad A , Freeman M , Grelle A , Janssens IA , Jarvis PG et al . 2007 . The likely impact of elevated [CO2], nitrogen deposition, increased temperature and management on carbon sequestration in temperate and boreal forest ecosystems: a literature review . New Phytologist 173 : 463480 .
  • Isebrands JG , McDonald EP , Kruger E , Hendrey G , Pregitzer K , Percy K , Sober J , Karnosky DF . 2001 . Growth responses of Populus tremuloides clones to interacting carbon dioxide and tropospheric ozone . Environmental Pollution 115 : 359371 .
  • Kaakinen S , Kostiainen K , Ek F , Saranpää P , Kubiske ME , Sober J , Karnosky DF , Vapaavuori E. 2004 . Stem wood properties of Populus tremuloides, Betula papyrifera and Acer saccharum saplings after three years of treatments to elevated carbon dioxide and ozone . Global Change Biology 10 : 15131525 .
  • Karnosky DF , Percy KE , Xiang B , Callan B , Noormets A , Mankovska B , Hopkin A , Sober J , Jones W , Dickson RE et al . 2002 . Interacting elevated CO2 and tropospheric O3 predisposes aspen (Populus tremuloides Michx.) to infection by rust (Melampsora medusae f.sp. tremuloidae ). Global Change Biology 8 : 329338 .
  • Karnosky DF , Pregitzer KS . 2006 . Impacts of elevated atmospheric [CO2] and [O3] on northern temperate forest ecosystems: results from the Aspen FACE experiment . In : Nosberger J , Long SP , Norby RJ , Stitt M , Hendrey GR , Blum H , eds . Managed ecosystems and CO2 case studies, processes, and perspectives . Berlin Heidelberg, Germany : Springer-Verlag , 213229 .
  • Karnosky DF , Pregitzer KS , Zak DR , Kubiske ME , Hendrey GR , Weinstein D , Nosal M , Percy KE . 2005 . Scaling ozone responses of forest trees to the ecosystem level in a changing climate . Plant, Cell & Environment 28 : 965981 .
  • Karnosky DF , Zak DR , Pregitzer KS , Awmack CS , Bockheim JG , Dickson RE , Hendrey GR , Host GE , King JS , Kopper BJ et al . 2003 . Tropospheric O3 moderates responses of temperate hardwood forests to elevated CO2: a synthesis of molecular to ecosystem results from the Aspen FACE project . Functional Ecology 17 : 289304 .
  • Karpinska B , Karlsson M , Srivastava M , Stenberg A , Schrader J , Sterky F , Bhalerao R , Wingsle G. 2004 . MYB transcription factors are differentially expressed and regulated during secondary vascular tissue development in hybrid aspen . Plant Molecular Biology 56 : 255270 .
  • King JS , Pregitzer KS , Zak DR , Holmes WE , Schmidt K. 2005 . Fine root chemistry and decomposition in model communities of north-temperate tree species show little response to elevated atmospheric CO2 and varying soil resource availability . Oecologia 146 : 318328 .
  • King JS , Pregitzer KS , Zak DR , Karnosky DF , Isebrands JG , Dickson RE , Hendrey GR , Sober J. 2001 . Fine root biomass and fluxes of soil carbon in young stands of paper birch and trembling aspen as affected by elevated atmospheric CO2 and tropospheric O3 . Oecologia 128 : 237250 .
  • Kopper BJ , Lindroth RL . 2003 . Effects of elevated carbon dioxide and ozone on the phytochemistry of aspen and performance of an herbivore . Oecologia 134 : 95103 .
  • Kubiske ME , Quinn VS , Marquardt PE , Karnosky DF . 2007 . Effects of elevated atmospheric CO2 and/or O3 on intra- and interspecific competitive ability of aspen . Plant Biology 9 : 342355 .
  • Li P , Bohnert HJ , Grene R. 2007 . All about FACE – plants in a high-[CO2] world . Trends in Plant Science 12 : 8789 .
  • Liberloo M , Calfapietra C , Lukac M , Godbold D , Luos ZB , Polle A , Hoosbeek MR , Kull O , Marek M , Raines C et al . 2006 . Woody biomass production during the second rotation of a bio-energy Populus plantation increases in a future high CO2 world . Global Change Biology 12 : 10941106 .
  • Liberloo M , Tulva I , Raïm O , Kull O , Ceulemans R. 2007 . Photosynthetic stimulation under long-term CO2 enrichment and fertilization is sustained across a closed Populus canopy profile (EUROFACE) . New Phytologist 173 : 537549 .
  • Long SP , Ainsworth EA , Rogers A , Ort DR . 2004 . Rising atmospheric carbon dioxide: plants FACE the future . Annual Reviews of Plant Biology 55 : 591628 .
  • Lukac M , Calfapietra C , Godbold DL . 2003 . Production, turnover and mycorrhizal colonisation of root systems of three Populus species grown under elevated CO2 (POPFACE) . Global Change Biology 9 : 838848 .
  • Luo Z-B , Calfapietra C , Liberloo M , Scarascia-Mungozza G , Polle A. 2006 . Carbon partitioning to mobile and structural fractions in poplar wood under elevated CO2 (EUROFACE) and N fertilization . Global Change Biology 12 : 272283 .
  • Luo Z-B , Calfapietra C , Scarascia-Mugnozza G , Liberloo M , Polle A. 2008 . Carbon-based secondary metabolites and internal nitrogen pools in Populus nigra under Free Air CO2 Enrichment (FACE) and nitrogen fertilization . Plant and Soil 304 : 4557 .
  • Major IT , Constabel CP . 2008 . Functional analysis of the kunitz trypsin inhibitor family in poplar reveals biochemical diversity and multiplicity in defense against herbivores . Plant Physiology 146 : 888903 .
  • Mankovska B , Percy K , Karnosky DF . 2005 . Impacts of greenhouse gases on epicuticular waxes of Populus tremuloides Michx.: results from an open-air exposure and a natural O3 gradient . Environmental Pollution 137 : 580586 .
  • McGrath KC , Dombrecht B , Manners JM , Schenk PM , Edgar CI , Maclean DJ , Scheible W-R , Udvardi MK , Kazan K. 2005 . Repressor- and activator-type ethylene response factors functioning in jasmonate signaling and disease resistance identified via a genome-wide screen of Arabidopsis transcription factor gene expression . Plant Physiology 139 : 949959 .
  • Meehl GA , Stocker TF , Collins WD , Friedlingstein P , Gaye AT , Gregory JM , Kitoh A , Knutti R , Murphy JM , Noda A et al . 2007 . Global climate projections . In : Solomon S , Qin D , Manning M , Chen Z , Marquis M , Averyt KB , Tignor M , Miller HL , eds . Climate change 2007: the physical science basis. Contribution of Working Group I to the Fourth Assessment Report of the Intergovernmental Panel on Climate Change . Cambridge, UK and New York, NY, USA : Cambridge University Press , 747845 .
  • Noormets A , McDonald EP , Kruger EL , Sober A , Isebrands JG , Dickson RE , Karnosky DF . 2001b . The effect of elevated carbon dioxide and ozone on leaf- and branch-level photosynthesis and potential plant-level carbon gain in aspen . Trees 15 : 262270 .
  • Noormets A , Sober A , Pell EJ , Dickson RE , Podila GK , Sober J , Isebrands JG , Karnosky DF . 2001a . Stomatal and nonstomatal limitation to photosynthesis in two trembling aspen (Populus tremuloides Michx.) clones exposed to elevated CO2 and/or O3 . Plant, Cell & Environment 24 : 327336 .
  • Norby RJ , DeLucia EH , Gielen B , Calfapietra C , Giardina CP , King JS , Ledford J , McCarthy HR , Moore DJP , Ceulemans R et al . 2005 . Forest response to elevated CO2 is conserved across a broad range of productivity . Proceedings of the National Academy of Sciences, USA 102 : 18 05218 056 .
  • Nowak RS , Ellsworth DS , Smith SD . 2004 . Functional responses of plants to elevated atmospheric CO2– do photosynthetic and productivity data from FACE experiments support early predictions? New Phytologist 162 : 253280 .
  • Oksanen E , Häikiö E , Sober J , Karnosky DF . 2003 . Ozone-induced H2O2 accumulation in field-grown aspen and birch is linked to foliar ultrastructure and peroxisomal activity . New Phytologist 161 : 791799 .
  • Oksanen E , Sober J , Karnosky DF . 2001 . Impacts of elevated CO2 and/or O3 on leaf ultrastructure of aspen (Populus tremuloides) and birch (Betula papyrifera) in the Aspen FACE experiment . Environmental Pollution 115 : 437446 .
  • Osier TL , Lindroth RL . 2006 . Genotype and environment determine allocation to and costs of resistance in quaking aspen . Oecologia 148 : 293303 .
  • Perlack RD , Wright LL , Turhollow AF , Graham RL , Stokes BJ , Erbach DC . 2005 . Biomass as feedstocks for a bioenergy and bioproducts industry: the technical feasibility of a billion-ton annual supply . ORNL/TM-2005/66 .
  • Prentice IC . 2001 . The carbon cycle and atmospheric carbon dioxide . In : Houghton JT , Ding Y , Griggs DJ , Noguer M , van der Linden PJ , Dai X , Maskell K , Johnson CA , eds . Climate change 2001: the scientific basis. Contribution of Working Group I to the Fourth Assessment Report of the Intergovernmental Panel on Climate Change . Cambridge, UK and New York, NY, USA : Cambridge University Press , 183238 .
  • Riikonen J , Kets K , Darbah J , Oksanen E , Sober A , Vapaavuori E , Kubiske ME , Nelson N , Karnosky DF . 2008 . Carbon gain and bud physiology in Populus tremuloides and Betula papyrifera grown under long-term exposure to elevated concentrations of CO2 and O3 . Tree Physiology 28 : 243254 .
  • Rinaldi C , Kohler A , Frey P , Duchaussoy F , Ningre N , Couloux A , Wincker P , Le Thiec D , Fluch S , Martin F et al . 2007 . Transcript profiling of poplar leaves upon infection with compatible and incompatible strains of the foliar rust Melampsora larici-populina . Plant Physiology 144 : 347366 .
  • Rogers A , Gibon Y , Stitt M , Morgan PB , Bernacchi CJ , Ort DR , Long SP . 2006 . Increased carbon availability at elevated carbon dioxide concentration improves nitrogen assimilation in a legume . Plant, Cell & Environment 29 : 16511658 .
  • Sims REH , Hastings A , Schlamadinger B , Taylor G , Smith P. 2006 . Energy crops: current status and future prospects . Global Change Biology 12 : 20542076 .
  • Taylor G , Street NR , Tricker PJ , Sjodin A , Graham L , Skogstrom O , Calfapietra C , Scarascia-Mugnozza G , Jansson S. 2005 . The transcriptome of Populus in elevated CO2 . New Phytologist 167 : 143154 .
  • Taylor G , Tallis MJ , Giardina CP , Percy KE , Miglietta F , Gupta PS , Gioli B , Calfapietra C , Gielen B , Kubiske ME et al . 2008 . Future atmospheric CO2 leads to delayed autumnal senescence . Global Change Biology 14 : 264275 .
  • Tjoelker MG , Oleksyn J , Reich PB . 1998 . Seedlings of five boreal tree species differ in acclimation of net photosynthesis to elevated CO2 and temperature . Tree Physiology 18 : 715726 .
  • Tsai C-J , Harding SA , Tschaplinski TJ , Lindroth RL , Yuan Y. 2006 . Genome-wide analysis of the structural genes regulating defense phenylpropanoid metabolism in Populus . New Phytologist 172 : 4762 .
  • Tuskan GA , Difazio S , Jansson S , Bohlmann J , Grigoriev I , Hellsten U , Putnam N , Ralph S , Rombauts S , Salamov A et al . 2006 . The genome of black cottonwood, Populus trichocarpa (Torr. & Gray) . Science 313 : 1596604 .
  • Wustman BA , Oksanen E , Karnosky DF , Sober J , Isebrands JG , Hendrey GR , Pregitzer KS , Podila GK . 2001 . Effects of elevated CO2 and O3 on aspen clones varying in O3 sensitivity: can CO2 ameliorate the harmful effects of O3? Environmental Pollution 115 : 473481 .
  • Zhong R , Demura T , Ye ZH . 2006 . Links SND1, a NAC domain transcription factor, is a key regulator of secondary wall synthesis in fibers of Arabidopsis . Plant Cell 18 : 315870 .
  • Zimmermann P , Schildknecht B , Craigon D , Garcia-Hernandez M , Gruissem W , May S , Mukherjee G , Parkinson H , Rhee S , Wagner U et al . 2006 . MIAME/Plant – adding value to plant microarray experiments . Plant Methods 2 : 1 doi:10.1186/1746-4811-2-1