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Fig. S1 Figure showing HindIII digestion to discriminate PPO alleles.

Table S1 Segregation of amplified fragment length polymorphism (AFLP) markers in parental populations

Table S2 Robustness of species-specific amplified fragment length polymorphism (AFLP) markers

Table S3 Linkage analysis for Amaranthus tuberculatus-specific markers

Table S4 Linkage analysis for Amaranthus hybridus-specific markers

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