SEARCH

SEARCH BY CITATION

Cited in:

CrossRef

This article has been cited by:

  1. 1
    Sunil Mundra, Rune Halvorsen, Håvard Kauserud, Eike Müller, Unni Vik, Pernille B. Eidesen, Arctic fungal communities associated with roots of Bistorta vivipara do not respond to the same fine-scale edaphic gradients as the aboveground vegetation, New Phytologist, 2015, 205, 2
  2. 2
    Madeleine M. Stone, Jinjun Kan, Alain F. Plante, Parent material and vegetation influence bacterial community structure and nitrogen functional genes along deep tropical soil profiles at the Luquillo Critical Zone Observatory, Soil Biology and Biochemistry, 2015, 80, 273

    CrossRef

  3. 3
    Shawn P. Brown, Allison M. Veach, Anne R. Rigdon-Huss, Kirsten Grond, Spencer K. Lickteig, Kale Lothamer, Alena K. Oliver, Ari Jumpponen, Scraping the bottom of the barrel: are rare high throughput sequences artifacts?, Fungal Ecology, 2015, 13, 221

    CrossRef

  4. 4
    Jane Oja, Petr Kohout, Leho Tedersoo, Tiiu Kull, Urmas Kõljalg, Temporal patterns of orchid mycorrhizal fungi in meadows and forests as revealed by 454 pyrosequencing, New Phytologist, 2015, 205, 2
  5. 5
    R. Balestrini, E. Lumini, R. Borriello, V. Bianciotto, Soil Microbiology, Ecology and Biochemistry, 2015,

    CrossRef

  6. 6
    Donald M. Walker, Brandy R. Lawrence, Dakota Esterline, Sean P. Graham, Michael A. Edelbrock, Jessica A. Wooten, A metagenomics-based approach to the top-down effect on the detritivore food web: a salamanders influence on fungal communities within a deciduous forest, Ecology and Evolution, 2014, 4, 21
  7. 7
    Lenaïg Kermarrec, Alain Franc, Frédéric Rimet, Philippe Chaumeil, Jean-Marc Frigerio, Jean-François Humbert, Agnès Bouchez, A next-generation sequencing approach to river biomonitoring using benthic diatoms, Freshwater Science, 2014, 33, 1, 349

    CrossRef

  8. 8
    Adrian Langarica-Fuentes, Pauline S. Handley, Ashley Houlden, Graeme Fox, Geoffrey D. Robson, An investigation of the biodiversity of thermophilic and thermotolerant fungal species in composts using culture-based and molecular techniques, Fungal Ecology, 2014, 11, 132

    CrossRef

  9. 9
    Rakel Blaalid, Marie L. Davey, Håvard Kauserud, Tor Carlsen, Rune Halvorsen, Klaus Høiland, Pernille B. Eidesen, Arctic root-associated fungal community composition reflects environmental filtering, Molecular Ecology, 2014, 23, 3
  10. 10
    Petr Kohout, Radka Sudová, Martina Janoušková, Martina Čtvrtlíková, Martin Hejda, Hana Pánková, Renata Slavíková, Kateřina Štajerová, Miroslav Vosátka, Zuzana Sýkorová, Comparison of commonly used primer sets for evaluating arbuscular mycorrhizal fungal communities: Is there a universal solution?, Soil Biology and Biochemistry, 2014, 68, 482

    CrossRef

  11. 11
    K. Lothamer, S. P. Brown, J. D. Mattox, A. Jumpponen, Comparison of root-associated communities of native and non-native ectomycorrhizal hosts in an urban landscape, Mycorrhiza, 2014, 24, 4, 267

    CrossRef

  12. 12
    Shawn P. Brown, Ari Jumpponen, Contrasting primary successional trajectories of fungi and bacteria in retreating glacier soils, Molecular Ecology, 2014, 23, 2
  13. 13
    Rasmus Kjøller, Søren Rosendahl, Cultivated and fallow fields harbor distinct communities of Basidiomycota, Fungal Ecology, 2014, 9, 43

    CrossRef

  14. 14
    Wu Xiong, Qingyun Zhao, Jun Zhao, Weibing Xun, Rong Li, Ruifu Zhang, Huasong Wu, Qirong Shen, Different Continuous Cropping Spans Significantly Affect Microbial Community Membership and Structure in a Vanilla-Grown Soil as Revealed by Deep Pyrosequencing, Microbial Ecology, 2014,

    CrossRef

  15. 15
    Matthias De Beenhouwer, Diriba Muleta, Bram Peeters, Maarten Van Geel, Bart Lievens, Olivier Honnay, DNA pyrosequencing evidence for large diversity differences between natural and managed coffee mycorrhizal fungal communities, Agronomy for Sustainable Development, 2014,

    CrossRef

  16. 16
    Leho Tedersoo, Mohammad Bahram, Ian A. Dickie, Does host plant richness explain diversity of ectomycorrhizal fungi? Re-evaluation of Gao et al. (2013) data sets reveals sampling effects, Molecular Ecology, 2014, 23, 5
  17. 17
    Jennifer K.M. Walker, Lori A. Phillips, Melanie D. Jones, Ectomycorrhizal fungal hyphae communities vary more along a pH and nitrogen gradient than between decayed wood and mineral soil microsites1, Botany, 2014, 92, 6, 453

    CrossRef

  18. 18
    Kaihui Liu, Xiaowei Ding, Hong-Fei Wang, Xiaomei Zhang, Wael N. Hozzein, Mohammed A. M. Wadaan, Afeng Lan, Bo Zhang, Wenjun Li, Eukaryotic microbial communities in hypersaline soils and sediments from the alkaline hypersaline Huama Lake as revealed by 454 pyrosequencing, Antonie van Leeuwenhoek, 2014, 105, 5, 871

    CrossRef

  19. 19
    L. Thomas, G. A. Kendrick, W. J. Kennington, Z. T. Richards, M. Stat, Exploring Symbiodinium diversity and host specificity in Acropora corals from geographical extremes of Western Australia with 454 amplicon pyrosequencing, Molecular Ecology, 2014, 23, 12
  20. 20
    Andrew Hoisington, Juan P. Maestre, Jeffrey A. Siegel, Kerry A. Kinney, Exploring the microbiome of the built environment: A primer on four biological methods available to building professionals, HVAC&R Research, 2014, 20, 1, 167

    CrossRef

  21. 21
    Marie L. Davey, Håvard Kauserud, Mikael Ohlson, Forestry impacts on the hidden fungal biodiversity associated with bryophytes, FEMS Microbiology Ecology, 2014, 90, 1
  22. 22
    Karen C. Dannemiller, Darryl Reeves, Kyle Bibby, Naomichi Yamamoto, Jordan Peccia, Fungal High-throughput Taxonomic Identification tool for use with Next-Generation Sequencing (FHiTINGS), Journal of Basic Microbiology, 2014, 54, 4
  23. 23
    Adrian Langarica-Fuentes, Urooj Zafar, Alan Heyworth, Thomas Brown, Graeme Fox, Geoffrey D. Robson, Fungal succession in an in-vessel composting system characterized using 454 pyrosequencing, FEMS Microbiology Ecology, 2014, 88, 2
  24. 24
    Daniel J. Glass, Andrew D. Taylor, Ian Charold Herriott, Roger W. Ruess, D. Lee Taylor, Habitat preferences, distribution, and temporal persistence of a novel fungal taxon in Alaskan boreal forest soils, Fungal Ecology, 2014, 12, 70

    CrossRef

  25. 25
    Michiel Op De Beeck, Bart Lievens, Pieter Busschaert, Francois Rineau, Mark Smits, Jaco Vangronsveld, Jan V. Colpaert, Impact of metal pollution on fungal diversity and community structures, Environmental Microbiology, 2014, 16, 11
  26. 26
    Michael Waud, Pieter Busschaert, Stefan Ruyters, Hans Jacquemyn, Bart Lievens, Impact of primer choice on characterization of orchid mycorrhizal communities using 454 pyrosequencing, Molecular Ecology Resources, 2014, 14, 4
  27. 27
    Delphine Méheust, Pierre Le Cann, Gabriel Reboux, Laurence Millon, Jean-Pierre Gangneux, Indoor fungal contamination: Health risks and measurement methods in hospitals, homes and workplaces, Critical Reviews in Microbiology, 2014, 40, 3, 248

    CrossRef

  28. 28
    Yudi M. Lozano, Sara Hortal, Cristina Armas, Francisco I. Pugnaire, Interactions among soil, plants, and microorganisms drive secondary succession in a dry environment, Soil Biology and Biochemistry, 2014, 78, 298

    CrossRef

  29. 29
    P.-L. Chagnon, L.D. Bainard, Is root DNA a reliable proxy to assess arbuscular mycorrhizal community structure?, Canadian Journal of Microbiology, 2014, 1

    CrossRef

  30. 30
    József Geml, Nicolás Pastor, Lisandro Fernandez, Silvia Pacheco, Tatiana A. Semenova, Alejandra G. Becerra, Christian Y. Wicaksono, Eduardo R. Nouhra, Large-scale fungal diversity assessment in the Andean Yungas forests reveals strong community turnover among forest types along an altitudinal gradient, Molecular Ecology, 2014, 23, 10
  31. 31
    Synnøve Botnen, Unni Vik, Tor Carlsen, Pernille B. Eidesen, Marie L. Davey, Håvard Kauserud, Low host specificity of root-associated fungi at an Arctic site, Molecular Ecology, 2014, 23, 4
  32. 32
    Anjuli Meiser, Miklós Bálint, Imke Schmitt, Meta-analysis of deep-sequenced fungal communities indicates limited taxon sharing between studies and the presence of biogeographic patterns, New Phytologist, 2014, 201, 2
  33. 33
    Luís França, Arantxa Lopéz-Lopéz, Ramon Rosselló-Móra, Milton S. Costa, Microbial diversity and dynamics of a groundwater and a still bottled natural mineral water, Environmental Microbiology, 2014, 16, 11
  34. 34
    Peter Kennedy, Nhu Nguyen, Hannah Cohen, Kabir Peay, Missing checkerboards? An absence of competitive signal inAlnus-associated ectomycorrhizal fungal communities, PeerJ, 2014, 2, e686

    CrossRef

  35. 35
    J. Johnson, C. Evans, N. Brown, S. Skeates, S. Watkinson, D. Bass, Molecular analysis shows that soil fungi from ancient semi-natural woodland exist in sites converted to non-native conifer plantations, Forestry, 2014, 87, 5, 705

    CrossRef

  36. 36
    Nathalie L. Forget, Maëva Perez, S. Kim Juniper, Molecular study of bacterial diversity within the trophosome of the vestimentiferan tubeworm Ridgeia piscesae, Marine Ecology, 2014, 35, 4
  37. 37
    Robert Lücking, James D. Lawrey, Patrick M. Gillevet, Masoumeh Sikaroodi, Manuela Dal-Forno, Simon A. Berger, Multiple ITS Haplotypes in the Genome of the Lichenized Basidiomycete Cora inversa (Hygrophoraceae): Fact or Artifact?, Journal of Molecular Evolution, 2014, 78, 2, 148

    CrossRef

  38. 38
    Gregory Bonito, Hannah Reynolds, Michael S. Robeson, Jessica Nelson, Brendan P. Hodkinson, Gerald Tuskan, Christopher W. Schadt, Rytas Vilgalys, Plant host and soil origin influence fungal and bacterial assemblages in the roots of woody plants, Molecular Ecology, 2014, 23, 13
  39. 39
    Aibin Zhan, Song He, Emily A. Brown, Frédéric J.J. Chain, Thomas W. Therriault, Cathryn L. Abbott, Daniel D. Heath, Melania E. Cristescu, Hugh J. MacIsaac, Reproducibility of pyrosequencing data for biodiversity assessment in complex communities, Methods in Ecology and Evolution, 2014, 5, 9
  40. 40
    Jana Voříšková, Vendula Brabcová, Tomáš Cajthaml, Petr Baldrian, Seasonal dynamics of fungal communities in a temperate oak forest soil, New Phytologist, 2014, 201, 1
  41. 41
    Kabir G. Peay, Thomas D. Bruns, Spore dispersal of basidiomycete fungi at the landscape scale is driven by stochastic and deterministic processes and generates variability in plant–fungal interactions, New Phytologist, 2014, 204, 1
  42. 42
    Ari Jumpponen, Kenneth L. Jones, Tallgrass prairie soil fungal communities are resilient to climate change, Fungal Ecology, 2014, 10, 44

    CrossRef

  43. 43
    Marie Foulongne-Oriol, Nicolas Lapalu, Cyril Férandon, Cathy Spataro, Nathalie Ferrer, Joelle Amselem, Jean-Michel Savoie, The first set of expressed sequence tags (EST) from the medicinal mushroom Agaricus subrufescens delivers resource for gene discovery and marker development, Applied Microbiology and Biotechnology, 2014, 98, 18, 7879

    CrossRef

  44. 44
    Jana M. U'Ren, Jakob M. Riddle, James T. Monacell, Ignazio Carbone, Jolanta Miadlikowska, A. Elizabeth Arnold, Tissue storage and primer selection influence pyrosequencing-based inferences of diversity and community composition of endolichenic and endophytic fungi, Molecular Ecology Resources, 2014, 14, 5
  45. 45
    Ling-Ling Shi, Peter E. Mortimer, J. W. Ferry Slik, Xiao-Ming Zou, Jianchu Xu, Wen-Ting Feng, Lu Qiao, Variation in forest soil fungal diversity along a latitudinal gradient, Fungal Diversity, 2014, 64, 1, 305

    CrossRef

  46. 46
    Yanhong Wang, Ping Li, Dawei Jiang, Bing Li, Xinyue Dai, Zhou Jiang, Yanxin Wang, Vertical distribution of bacterial communities in high arsenic sediments of Hetao Plain, Inner Mongolia, Ecotoxicology, 2014, 23, 10, 1890

    CrossRef

  47. 47
    Martina Štursová, Jaroslav Šnajdr, Tomáš Cajthaml, Jiří Bárta, Hana Šantrůčková, Petr Baldrian, When the forest dies: the response of forest soil fungi to a bark beetle-induced tree dieback, The ISME Journal, 2014, 8, 9, 1920

    CrossRef

  48. 48
    Ylva Lekberg, Sean M. Gibbons, Søren Rosendahl, Will different OTU delineation methods change interpretation of arbuscular mycorrhizal fungal community patterns?, New Phytologist, 2014, 202, 4
  49. 49
    Abdala Diedhiou, Christelle Ebenye, Marc-André Selosse, Nérée Awana, Amadou Bâ, Ectomycorrhizal Symbioses in Tropical and Neotropical Forests, 2014,

    CrossRef

  50. 50
    Alberto Orgiazzi, Valeria Bianciotto, Paola Bonfante, Stefania Daghino, Stefano Ghignone, Alexandra Lazzari, Erica Lumini, Antonietta Mello, Chiara Napoli, Silvia Perotto, Alfredo Vizzini, Simonetta Bagella, Claude Murat, Mariangela Girlanda, 454 Pyrosequencing Analysis of Fungal Assemblages from Geographically Distant, Disparate Soils Reveals Spatial Patterning and a Core Mycobiome, Diversity, 2013, 5, 1, 73

    CrossRef

  51. You have free access to this content51
    Susana Rodríguez-Echeverría, Cristina Armas, Nuria Pistón, Sara Hortal, Francisco I. Pugnaire, A role for below-ground biota in plant–plant facilitation, Journal of Ecology, 2013, 101, 6
  52. 52
    Christoffer B. Harder, Thomas Læssøe, Tobias G. Frøslev, Flemming Ekelund, Søren Rosendahl, Rasmus Kjøller, A three-gene phylogeny of the Mycena pura complex reveals 11 phylogenetic species and shows ITS to be unreliable for species identification, Fungal Biology, 2013, 117, 11-12, 764

    CrossRef

  53. 53
    Charles Bachy, John R Dolan, Purificación López-García, Philippe Deschamps, David Moreira, Accuracy of protist diversity assessments: morphology compared with cloning and direct pyrosequencing of 18S rRNA genes and ITS regions using the conspicuous tintinnid ciliates as a case study, The ISME Journal, 2013, 7, 2, 244

    CrossRef

  54. 54
    Teresita M. Porter, G. Brian Golding, Christine King, Duane Froese, Grant Zazula, Hendrik N. Poinar, Amplicon pyrosequencing late Pleistocene permafrost: the removal of putative contaminant sequences and small-scale reproducibility, Molecular Ecology Resources, 2013, 13, 5
  55. 55
    Marie L. Davey, Einar Heegaard, Rune Halvorsen, Håvard Kauserud, Mikael Ohlson, Amplicon-pyrosequencing-based detection of compositional shifts in bryophyte-associated fungal communities along an elevation gradient, Molecular Ecology, 2013, 22, 2
  56. 56
    Guido Heinrichs, Iris Hübner, Carsten K. Schmidt, G. Sybren de Hoog, Gerhard Haase, Analysis of Black Fungal Biofilms Occurring at Domestic Water Taps (I): Compositional Analysis Using Tag-Encoded FLX Amplicon Pyrosequencing, Mycopathologia, 2013, 175, 5-6, 387

    CrossRef

  57. 57
    Tomáš Větrovský, Petr Baldrian, Analysis of soil fungal communities by amplicon pyrosequencing: current approaches to data analysis and the introduction of the pipeline SEED, Biology and Fertility of Soils, 2013, 49, 8, 1027

    CrossRef

  58. 58
    Yin-Xin Zeng, Fang Zhang, Jian-Feng He, Sang H. Lee, Zong-Yun Qiao, Yong Yu, Hui-Rong Li, Bacterioplankton community structure in the Arctic waters as revealed by pyrosequencing of 16S rRNA genes, Antonie van Leeuwenhoek, 2013, 103, 6, 1309

    CrossRef

  59. 59
    Sabine Giessler, Justyna Wolinska, Capturing the population structure of microparasites: using ITS-sequence data and a pooled DNA approach, Molecular Ecology Resources, 2013, 13, 5
  60. 60
    Anna L. Bazzicalupo, Miklós Bálint, Imke Schmitt, Comparison of ITS1 and ITS2 rDNA in 454 sequencing of hyperdiverse fungal communities, Fungal Ecology, 2013, 6, 1, 102

    CrossRef

  61. 61
    Anzu Ikeda, Shunsuke Matsuoka, Hayato Masuya, Akira S. Mori, Dai Hirose, Takashi Osono, Comparison of the diversity, composition, and host recurrence of xylariaceous endophytes in subtropical, cool temperate, and subboreal regions in Japan, Population Ecology, 2013,

    CrossRef

  62. 62
    Shawn P. Brown, Mac A. Callaham, Alena K. Oliver, Ari Jumpponen, Deep Ion Torrent sequencing identifies soil fungal community shifts after frequent prescribed fires in a southeastern US forest ecosystem, FEMS Microbiology Ecology, 2013, 86, 3
  63. 63
    Alfons R. Weig, Derek Peršoh, Sebastian Werner, Amelie Betzlbacher, Gerhard Rambold, Diagnostic assessment of mycodiversity in environmental samples by fungal ITS1 rDNA length polymorphism, Mycological Progress, 2013, 12, 4, 719

    CrossRef

  64. 64
    Emily B. Hollister, Ping Hu, Autumn S. Wang, Frank M. Hons, Terry J. Gentry, Differential impacts of brassicaceous and nonbrassicaceous oilseed meals on soil bacterial and fungal communities, FEMS Microbiology Ecology, 2013, 83, 3
  65. 65
    Elke Allers, Jody J Wright, Kishori M Konwar, Charles G Howes, Erica Beneze, Steven J Hallam, Matthew B Sullivan, Diversity and population structure of Marine Group A bacteria in the Northeast subarctic Pacific Ocean, The ISME Journal, 2013, 7, 2, 256

    CrossRef

  66. 66
    Melissa E Carew, Vincent J Pettigrove, Leon Metzeling, Ary A Hoffmann, Environmental monitoring using next generation sequencing: rapid identification of macroinvertebrate bioindicator species, Frontiers in Zoology, 2013, 10, 1, 45

    CrossRef

  67. 67
    Björn D. Lindahl, R. Henrik Nilsson, Leho Tedersoo, Kessy Abarenkov, Tor Carlsen, Rasmus Kjøller, Urmas Kõljalg, Taina Pennanen, Søren Rosendahl, Jan Stenlid, Håvard Kauserud, Fungal community analysis by high-throughput sequencing of amplified markers – a user's guide, New Phytologist, 2013, 199, 1
  68. 68
    Derek Peršoh, Julia Segert, Anja Zigan, Gerhard Rambold, Fungal community composition shifts along a leaf degradation gradient in a European beech forest, Plant and Soil, 2013, 362, 1-2, 175

    CrossRef

  69. 69
    Jana Voříšková, Petr Baldrian, Fungal community on decomposing leaf litter undergoes rapid successional changes, The ISME Journal, 2013, 7, 3, 477

    CrossRef

  70. 70
    Lihua Lu, Shixue Yin, Xing Liu, Wenming Zhang, Tianyu Gu, Qirong Shen, Huizhen Qiu, Fungal networks in yield-invigorating and -debilitating soils induced by prolonged potato monoculture, Soil Biology and Biochemistry, 2013, 65, 186

    CrossRef

  71. 71
    Maarja Öpik, Martin Zobel, Juan J. Cantero, John Davison, José M. Facelli, Inga Hiiesalu, Teele Jairus, Jesse M. Kalwij, Kadri Koorem, Miguel E. Leal, Jaan Liira, Madis Metsis, Valentina Neshataeva, Jaanus Paal, Cherdchai Phosri, Sergei Põlme, Ülle Reier, Ülle Saks, Heidy Schimann, Odile Thiéry, Martti Vasar, Mari Moora, Global sampling of plant roots expands the described molecular diversity of arbuscular mycorrhizal fungi, Mycorrhiza, 2013, 23, 5, 411

    CrossRef

  72. 72
    Aibin Zhan, Martin Hulák, Francisco Sylvester, Xiaoting Huang, Abisola A. Adebayo, Cathryn L. Abbott, Sarah J. Adamowicz, Daniel D. Heath, Melania E. Cristescu, Hugh J. MacIsaac, High sensitivity of 454 pyrosequencing for detection of rare species in aquatic communities, Methods in Ecology and Evolution, 2013, 4, 6
  73. 73
    Timothée Poisot, Bérangère Péquin, Dominique Gravel, High-Throughput Sequencing: A Roadmap Toward Community Ecology, Ecology and Evolution, 2013, 3, 4
  74. 74
    Cheng Gao, Nan-Nan Shi, Yue-Xing Liu, Kabir G. Peay, Yong Zheng, Qiong Ding, Xiang-Cheng Mi, Ke-Ping Ma, Tesfaye Wubet, François Buscot, Liang-Dong Guo, Host plant genus-level diversity is the best predictor of ectomycorrhizal fungal diversity in a Chinese subtropical forest, Molecular Ecology, 2013, 22, 12
  75. 75
    Marie L. Davey, Rune Heimdal, Mikael Ohlson, Håvard Kauserud, Host- and tissue-specificity of moss-associated Galerina and Mycena determined from amplicon pyrosequencing data, Fungal Ecology, 2013, 6, 3, 179

    CrossRef

  76. You have free access to this content76
    Johan Bengtsson-Palme, Martin Ryberg, Martin Hartmann, Sara Branco, Zheng Wang, Anna Godhe, Pierre Wit, Marisol Sánchez-García, Ingo Ebersberger, Filipe Sousa, Anthony Amend, Ari Jumpponen, Martin Unterseher, Erik Kristiansson, Kessy Abarenkov, Yann J. K. Bertrand, Kemal Sanli, K. Martin Eriksson, Unni Vik, Vilmar Veldre, R. Henrik Nilsson, Improved software detection and extraction of ITS1 and ITS2 from ribosomal ITS sequences of fungi and other eukaryotes for analysis of environmental sequencing data, Methods in Ecology and Evolution, 2013, 4, 10
  77. 77
    Jennifer M. Talbot, Thomas D. Bruns, Dylan P. Smith, Sara Branco, Sydney I. Glassman, Sonya Erlandson, Rytas Vilgalys, Kabir G. Peay, Independent roles of ectomycorrhizal and saprotrophic communities in soil organic matter decomposition, Soil Biology and Biochemistry, 2013, 57, 282

    CrossRef

  78. 78
    R. Blaalid, S. Kumar, R. H. Nilsson, K. Abarenkov, P. M. Kirk, H. Kauserud, ITS1 versus ITS2 as DNA metabarcodes for fungi, Molecular Ecology Resources, 2013, 13, 2
  79. 79
    Martin Unterseher, Derek Peršoh, Martin Schnittler, Leaf-inhabiting endophytic fungi of European Beech (Fagus sylvatica L.) co-occur in leaf litter but are rare on decaying wood of the same host, Fungal Diversity, 2013, 60, 1, 43

    CrossRef

  80. 80
    Jennifer K. M. Walker, Melanie D. Jones, Little evidence for niche partitioning among ectomycorrhizal fungi on spruce seedlings planted in decayed wood versus mineral soil microsites, Oecologia, 2013, 173, 4, 1499

    CrossRef

  81. 81
    Marc-André Selosse, Francis Martin, Mycorrhizas and New Phytologist: une vraie histoire d'amour, New Phytologist, 2013, 200, 3
  82. 82
    L. Kermarrec, A. Franc, F. Rimet, P. Chaumeil, J. F. Humbert, A. Bouchez, Next-generation sequencing to inventory taxonomic diversity in eukaryotic communities: a test for freshwater diatoms, Molecular Ecology Resources, 2013, 13, 4
  83. 83
    Jennifer Kerekes, Michael Kaspari, Bradley Stevenson, R. Henrik Nilsson, Martin Hartmann, Anthony Amend, Thomas D. Bruns, Nutrient enrichment increased species richness of leaf litter fungal assemblages in a tropical forest, Molecular Ecology, 2013, 22, 10
  84. 84
    L. Yu, M. Nicolaisen, J. Larsen, S. Ravnskov, Organic fertilization alters the community composition of root associated fungi in Pisum sativum, Soil Biology and Biochemistry, 2013, 58, 36

    CrossRef

  85. 85
    Yinxin Zeng, Yong Yu, Huirong Li, Jianfeng He, Sang H. Lee, Kun Sun, Phylogenetic diversity of planktonic bacteria in the Chukchi Borderland region in summer, Acta Oceanologica Sinica, 2013, 32, 6, 66

    CrossRef

  86. 86
    Geneviève Bricheux, Loïc Morin, Gwenaël Moal, Gérard Coffe, Damien Balestrino, Nicolas Charbonnel, Jacques Bohatier, Christiane Forestier, Pyrosequencing assessment of prokaryotic and eukaryotic diversity in biofilm communities from a French river, MicrobiologyOpen, 2013, 2, 3
  87. 87
    Andrea Vannini, Natalia Bruni, Alessia Tomassini, Selma Franceschini, Anna Maria Vettraino, Pyrosequencing of environmental soil samples reveals biodiversity of the Phytophthora resident community in chestnut forests, FEMS Microbiology Ecology, 2013, 85, 3
  88. 88
    S. Hortal, F. Bastida, C. Armas, Y.M. Lozano, J.L. Moreno, C. García, F.I. Pugnaire, Soil microbial community under a nurse-plant species changes in composition, biomass and activity as the nurse grows, Soil Biology and Biochemistry, 2013, 64, 139

    CrossRef

  89. 89
    Kabir G Peay, Christopher Baraloto, Paul VA Fine, Strong coupling of plant and fungal community structure across western Amazonian rainforests, The ISME Journal, 2013, 7, 9, 1852

    CrossRef

  90. 90
    Thomas W. Crowther, David W. G. Stanton, Stephen M. Thomas, A. Donald A'Bear, Jennifer Hiscox, T. Hefin Jones, Jana Voříšková, Petr Baldrian, Lynne Boddy, Top-down control of soil fungal community composition by a globally distributed keystone consumer, Ecology, 2013, 94, 11, 2518

    CrossRef

  91. 91
    Xin Zhou, Yiyuan Li, Shanlin Liu, Qing Yang, Xu Su, Lili Zhou, Min Tang, Ribei Fu, Jiguang Li, Quanfei Huang, Ultra-deep sequencing enables high-fidelity recovery of biodiversity for bulk arthropod samples without PCR amplification, GigaScience, 2013, 2, 1, 4

    CrossRef

  92. 92
    Vincent Bourret, Guillaume Croville, Jérôme Mariette, Christophe Klopp, Olivier Bouchez, Laurence Tiley, Jean-Luc Guérin, Whole-genome, deep pyrosequencing analysis of a duck influenza A virus evolution in swine cells, Infection, Genetics and Evolution, 2013, 18, 31

    CrossRef

  93. 93
    Ylva Lekberg, Tim Schnoor, Rasmus Kjøller, Sean M. Gibbons, Lars H. Hansen, Waleed A. Al-Soud, Søren J. Sørensen, Søren Rosendahl, 454-sequencing reveals stochastic local reassembly and high disturbance tolerance within arbuscular mycorrhizal fungal communities, Journal of Ecology, 2012, 100, 1
  94. 94
    Petr Baldrian, Miroslav Kolařík, Martina Štursová, Jan Kopecký, Vendula Valášková, Tomáš Větrovský, Lucia Žifčáková, Jaroslav Šnajdr, Jakub Rídl, Čestmír Vlček, Jana Voříšková, Active and total microbial communities in forest soil are largely different and highly stratified during decomposition, The ISME Journal, 2012, 6, 2, 248

    CrossRef

  95. 95
    Mulan Dai, Chantal Hamel, Marc St. Arnaud, Yong He, Cynthia Grant, Newton Lupwayi, Henry Janzen, Sukhdev S. Malhi, Xiaohong Yang, Zhiqin Zhou, Arbuscular mycorrhizal fungi assemblages in Chernozem great groups revealed by massively parallel pyrosequencing, Canadian Journal of Microbiology, 2012, 58, 1, 81

    CrossRef

  96. 96
    Richard O’Hanlon, Below-ground ectomycorrhizal communities: the effect of small scale spatial and short term temporal variation, Symbiosis, 2012, 57, 2, 57

    CrossRef

  97. 97
    SANNE BOESSENKOOL, LAURA S. EPP, JAMES HAILE, EVA BELLEMAIN, MARY EDWARDS, ERIC COISSAC, ESKE WILLERSLEV, CHRISTIAN BROCHMANN, Blocking human contaminant DNA during PCR allows amplification of rare mammal species from sedimentary ancient DNA, Molecular Ecology, 2012, 21, 8
  98. You have free access to this content98
    Martina Štursová, Lucia Žifčáková, Mary Beth Leigh, Robert Burgess, Petr Baldrian, Cellulose utilization in forest litter and soil: identification of bacterial and fungal decomposers, FEMS Microbiology Ecology, 2012, 80, 3
  99. 99
    RAKEL BLAALID, TOR CARLSEN, SURENDRA KUMAR, RUNE HALVORSEN, KARL INNE UGLAND, GIOVANNI FONTANA, HÅVARD KAUSERUD, Changes in the root-associated fungal communities along a primary succession gradient analysed by 454 pyrosequencing, Molecular Ecology, 2012, 21, 8
  100. 100
    J.K.M. Walker, V. Ward, C. Paterson, Melanie D. Jones, Coarse woody debris retention in subalpine clearcuts affects ectomycorrhizal root tip community structure within fifteen years of harvest, Applied Soil Ecology, 2012, 60, 5

    CrossRef

  101. 101
    Cherdchai Phosri, Sergei Põlme, Andy F. S. Taylor, Urmas Kõljalg, Nuttika Suwannasai, Leho Tedersoo, Diversity and community composition of ectomycorrhizal fungi in a dry deciduous dipterocarp forest in Thailand, Biodiversity and Conservation, 2012, 21, 9, 2287

    CrossRef

  102. 102
    Leho Tedersoo, Triin Naadel, Mohammad Bahram, Karin Pritsch, Franz Buegger, Miguel Leal, Urmas Kõljalg, Kadri Põldmaa, Enzymatic activities and stable isotope patterns of ectomycorrhizal fungi in relation to phylogeny and exploration types in an afrotropical rain forest, New Phytologist, 2012, 195, 4
  103. 103
    Elisa Pellegrino, Alessandra Turrini, Hannes A. Gamper, Giovanni Cafà, Enrico Bonari, J. Peter W. Young, Manuela Giovannetti, Establishment, persistence and effectiveness of arbuscular mycorrhizal fungal inoculants in the field revealed using molecular genetic tracing and measurement of yield components, New Phytologist, 2012, 194, 3
  104. 104
    R. Henrik Nilsson, Leho Tedersoo, Kessy Abarenkov, Martin Ryberg, Erik Kristiansson, Martin Hartmann, Conrad L. Schoch, Johan A. A. Nylander, Johannes Bergsten, Teresita M. Porter, Ari Jumpponen, Parag Vaishampayan, Otso Ovaskainen, Nils Hallenberg, Johan Bengtsson-Palme, K. Martin Eriksson, Karl-Henrik Larsson, Ellen Larsson, Urmas Kõljalg, Five simple guidelines for establishing basic authenticity and reliability of newly generated fungal ITS sequences, MycoKeys, 2012, 4, 37

    CrossRef

  105. 105
    Krista L. McGuire, Noah Fierer, Carling Bateman, Kathleen K. Treseder, Benjamin L. Turner, Fungal Community Composition in Neotropical Rain Forests: the Influence of Tree Diversity and Precipitation, Microbial Ecology, 2012, 63, 4, 804

    CrossRef

  106. 106
    Håvard Kauserud, Surendra Kumar, Anne K. Brysting, Jenni Nordén, Tor Carlsen, High consistency between replicate 454 pyrosequencing analyses of ectomycorrhizal plant root samples, Mycorrhiza, 2012, 22, 4, 309

    CrossRef

  107. 107
    Katie M. Becklin, Kate L. Hertweck, Ari Jumpponen, Host Identity Impacts Rhizosphere Fungal Communities Associated with Three Alpine Plant Species, Microbial Ecology, 2012, 63, 3, 682

    CrossRef

  108. 108
    Jason D. Hoeksema, Aimée T. Classen, Is plant genetic control of ectomycorrhizal fungal communities an untapped source of stable soil carbon in managed forests?, Plant and Soil, 2012, 359, 1-2, 197

    CrossRef

  109. 109
    Roland C. Wilhelm, Kristin J. Radtke, Nadia C.S. Mykytczuk, Charles W. Greer, Lyle G. Whyte, Life at the Wedge: the Activity and Diversity of Arctic Ice Wedge Microbial Communities, Astrobiology, 2012, 12, 4, 347

    CrossRef

  110. 110
    Thomas M. Gihring, Stefan J. Green, Christopher W. Schadt, Massively parallel rRNA gene sequencing exacerbates the potential for biased community diversity comparisons due to variable library sizes, Environmental Microbiology, 2012, 14, 2
  111. 111
    Raeid M.M. Abed, Alban Ramette, Vera Hübner, Patrick Deckker, Dirk Beer, Microbial diversity of eolian dust sources from saline lake sediments and biological soil crusts in arid Southern Australia, FEMS Microbiology Ecology, 2012, 80, 2
  112. 112
    Yonathan Arfi, Marc Buée, Cyril Marchand, Anthony Levasseur, Eric Record, Multiple markers pyrosequencing reveals highly diverse and host-specific fungal communities on the mangrove trees Avicennia marina and Rhizophora stylosa, FEMS Microbiology Ecology, 2012, 79, 2
  113. 113
    INGA HIIESALU, MAARJA ÖPIK, MADIS METSIS, LIISA LILJE, JOHN DAVISON, MARTTI VASAR, MARI MOORA, MARTIN ZOBEL, SCOTT D. WILSON, MEELIS PÄRTEL, Plant species richness belowground: higher richness and new patterns revealed by next-generation sequencing, Molecular Ecology, 2012, 21, 8
  114. 114
    Agostina V. Marano, Frank H. Gleason, Felix Bärlocher, Carmen L.A. Pires-Zottarelli, Osu Lilje, Steve K. Schmidt, Serena Rasconi, Maiko Kagami, Marcelo D. Barrera, Télesphore Sime-Ngando, Sammy Boussiba, José I. de Souza, Joan E. Edwards, Quantitative methods for the analysis of zoosporic fungi, Journal of Microbiological Methods, 2012, 89, 1, 22

    CrossRef

  115. 115
    PETER G. KENNEDY, P. B. MATHENY, K. M. RYBERG, TERRY W. HENKEL, JESSIE K. UEHLING, MATTHEW E. SMITH, Scaling up: examining the macroecology of ectomycorrhizal fungi, Molecular Ecology, 2012, 21, 17
  116. 116
    Marie L. Davey, Einar Heegaard, Rune Halvorsen, Mikael Ohlson, Håvard Kauserud, Seasonal trends in the biomass and structure of bryophyte-associated fungal communities explored by 454 pyrosequencing, New Phytologist, 2012, 195, 4
  117. 117
    Martin Hartmann, Charles G Howes, David VanInsberghe, Hang Yu, Dipankar Bachar, Richard Christen, Rolf Henrik Nilsson, Steven J Hallam, William W Mohn, Significant and persistent impact of timber harvesting on soil microbial communities in Northern coniferous forests, The ISME Journal, 2012, 6, 12, 2199

    CrossRef

  118. 118
    Lihui Xu, Sabine Ravnskov, John Larsen, R. Henrik Nilsson, Mogens Nicolaisen, Soil fungal community structure along a soil health gradient in pea fields examined using deep amplicon sequencing, Soil Biology and Biochemistry, 2012, 46, 26

    CrossRef

  119. 119
    Michael D J Lynch, Andrea K Bartram, Josh D Neufeld, Targeted recovery of novel phylogenetic diversity from next-generation sequence data, The ISME Journal, 2012, 6, 11, 2067

    CrossRef

  120. 120
    Larry M. Feinstein, Christopher B. Blackwood, Taxa–area relationship and neutral dynamics influence the diversity of fungal communities on senesced tree leaves, Environmental Microbiology, 2012, 14, 6
  121. 121
    NIGEL G. YOCCOZ, The future of environmental DNA in ecology, Molecular Ecology, 2012, 21, 8
  122. 122
    Derek Peršoh, Alfons R. Weig, Gerhard Rambold, A Transcriptome—Targeting EcoChip for Assessing Functional Mycodiversity, Microarrays, 2011, 1, 3, 25

    CrossRef

  123. 123
    Teresita M. Porter, G. Brian Golding, Are similarity- or phylogeny-based methods more appropriate for classifying internal transcribed spacer (ITS) metagenomic amplicons?, New Phytologist, 2011, 192, 3
  124. 124
    Guillaume Lentendu, Lucie Zinger, Stéphanie Manel, Eric Coissac, Philippe Choler, Roberto A. Geremia, Christelle Melodelima, Assessment of soil fungal diversity in different alpine tundra habitats by means of pyrosequencing, Fungal Diversity, 2011, 49, 1, 113

    CrossRef

  125. 125
    Amy Austin, Celebrating the ecosystem’s three-quarter century: Introduction to a Virtual Special Issue on Sir Arthur Tansley’s ecosystem concept, New Phytologist, 2011, 192, 3
  126. 126
    Surendra Kumar, Tor Carlsen, Bjørn-Helge Mevik, Pål Enger, Rakel Blaalid, Kamran Shalchian-Tabrizi, Håvard Kauserud, CLOTU: An online pipeline for processing and clustering of 454 amplicon reads into OTUs followed by taxonomic annotation, BMC Bioinformatics, 2011, 12, 1, 182

    CrossRef

  127. 127
    Laura J. Kelly, Peter M. Hollingsworth, Brian J. Coppins, Christopher J. Ellis, Paul Harrold, James Tosh, Rebecca Yahr, DNA barcoding of lichenized fungi demonstrates high identification success in a floristic context, New Phytologist, 2011, 191, 1
  128. 128
    Matthew E. Smith, Terry W. Henkel, M. Catherine Aime, Alex K. Fremier, Rytas Vilgalys, Ectomycorrhizal fungal diversity and community structure on three co-occurring leguminous canopy tree species in a Neotropical rainforest, New Phytologist, 2011, 192, 3
  129. 129
    Lihui Xu, Sabine Ravnskov, John Larsen, Mogens Nicolaisen, Influence of DNA extraction and PCR amplification on studies of soil fungal communities based on amplicon sequencing, Canadian Journal of Microbiology, 2011, 57, 12, 1062

    CrossRef

  130. You have free access to this content130
    Michael J. Wingfield, Jolanda Roux, Brenda D. Wingfield, Insect pests and pathogens of Australian acacias grown as non-natives – an experiment in biogeography with far-reaching consequences, Diversity and Distributions, 2011, 17, 5
  131. 131
    Vanessa Reininger, Christoph R. Grünig, Thomas N. Sieber, Microsatellite-Based Quantification Method to Estimate Biomass of Endophytic Phialocephala Species in Strain Mixtures, Microbial Ecology, 2011, 61, 3, 676

    CrossRef

  132. 132
    David S. Hibbett, Anders Ohman, Dylan Glotzer, Mitchell Nuhn, Paul Kirk, R. Henrik Nilsson, Progress in molecular and morphological taxon discovery in Fungi and options for formal classification of environmental sequences, Fungal Biology Reviews, 2011, 25, 1, 38

    CrossRef

  133. 133
    MARTIN UNTERSEHER, ARI JUMPPONEN, MAARJA ÖPIK, LEHO TEDERSOO, MARI MOORA, CARSTEN F. DORMANN, MARTIN SCHNITTLER, Species abundance distributions and richness estimations in fungal metagenomics – lessons learned from community ecology, Molecular Ecology, 2011, 20, 2
  134. 134
    R. Henrik Nilsson, Leho Tedersoo, Björn D. Lindahl, Rasmus Kjøller, Tor Carlsen, Christopher Quince, Kessy Abarenkov, Taina Pennanen, Jan Stenlid, Tom Bruns, Karl-Henrik Larsson, Urmas Kõljalg, Håvard Kauserud, Towards standardization of the description and publication of next-generation sequencing datasets of fungal communities, New Phytologist, 2011, 191, 2
  135. 135
    László G. Nagy, Tamás Petkovits, Gábor M. Kovács, Kerstin Voigt, Csaba Vágvölgyi, Tamás Papp, Where is the unseen fungal diversity hidden? A study of Mortierella reveals a large contribution of reference collections to the identification of fungal environmental sequences, New Phytologist, 2011, 191, 3
  136. 136
    Ian A. Dickie, Insidious effects of sequencing errors on perceived diversity in molecular surveys, New Phytologist, 2010, 188, 4
  137. 137
    PATRICIA JARGEAT, FLORENT MARTOS, FABIAN CARRICONDE, HERVÉ GRYTA, PIERRE-ARTHUR MOREAU, MONIQUE GARDES, Phylogenetic species delimitation in ectomycorrhizal fungi and implications for barcoding: the case of the Tricholoma scalpturatum complex (Basidiomycota), Molecular Ecology, 2010, 19, 23
  138. 138
    Björn D. Lindahl, Cheryl R. Kuske, Metagenomics for Study of Fungal Ecology,
  139. 139
    Andrew D. W. Geering, Molecular Markers for Plant Biosecurity,