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  • Amiard S, Charbonnel C, Allain E, Depeiges A, White CI, Gallego ME. 2010. Distinct roles of the ATR kinase and the Mre11-Rad50-Nbs1 complex in the maintenance of chromosomal stability in Arabidopsis. The Plant Cell 22: 30203033.
  • Bassing CH, Alt FW. 2004. The cellular response to general and programmed DNA double strand breaks. DNA Repair (Amsterdam) 3: 781796.
  • Bassing CH, Chua KF, Sekiguchi J, Suh H, Whitlow SR, Fleming JC, Monroe BC, Ciccone DN, Yan C, Vlasakova K et al. 2002. Increased ionizing radiation sensitivity and genomic instability in the absence of histone H2AX. Proceedings of the National Academy of Sciences, USA 99: 81738178.
  • Burma S, Chen BP, Murphy M, Kurimasa A, Chen DJ. 2001. ATM phosphorylates histone H2AX in response to DNA double-strand breaks. Journal of Biological Chemistry 276: 4246242467.
  • Celeste A, Difilippantonio S, Difilippantonio MJ, Fernandez-Capetillo O, Pilch DR, Sedelnikova OA, Eckhaus M, Ried T, Bonner WM, Nussenzweig A. 2003a. H2AX haploinsufficiency modifies genomic stability and tumor susceptibility. Cell 114: 371383.
  • Celeste A, Fernandez-Capetillo O, Kruhlak MJ, Pilch DR, Staudt DW, Lee A, Bonner RF, Bonner WM, Nussenzweig A. 2003b. Histone H2AX phosphorylation is dispensable for the initial recognition of DNA breaks. Nature Cell Biology 5: 675679.
  • Chabouté ME, Clement B, Philipps G. 2002. S phase and meristem-specific expression of the tobacco RNR1b gene is mediated by an E2F element located in the 5′ leader sequence. Journal of Biological Chemistry 277: 1784517851.
  • Chabouté ME, Clément B, Sekine M, Philipps G, Chaubet-Gigot N. 2000. Cell cycle regulation of the tobacco ribonucleotide reductase small subunit gene is mediated by E2F-like elements. The Plant Cell 12: 19872000.
  • Chen J, Zhu F, Weaks RL, Biswas AK, Guo R, Li Y, Johnson DG. 2011. E2F1 promotes the recruitment of DNA repair factors to sites of DNA double-strand breaks. Cell Cycle 10: 18.
  • Chen IP, Haehnel U, Altschmied L, Schubert I, Puchta H. 2003. The transcriptional response of Arabidopsis to genotoxic stress – a high-density colony array study (HDCA). The Plant Journal 35: 771786.
  • Clough SJ, Bent AF. 1998. Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana. The Plant Journal 16: 735743.
  • Collins AR. 2004. The comet assay for DNA damage and repair: principles, applications, and limitations. Molecular Biotechnology 26: 249261.
  • Culligan K, Robertson CE, Foreman J, Doerner P, Britt AB. 2006. ATR and ATM play both distinct and additive roles in response to ionization radiation. The Plant Journal 48: 947961.
  • Culligan K, Tissier A, Britt A. 2004. ATR regulates a G2-phase cell-cycle checkpoint in Arabidopsis thaliana. The Plant Cell 16: 10911104.
  • Franco S, Alt FW, Manis JP. 2006. Pathways that suppress programmed DNA breaks from progressing to chromosomal breaks and translocations. DNA Repair 5: 10301041.
  • Friesner JD, Liu B, Culligan K, Britt AB. 2005. Ionizing radiation-dependent gamma-H2AX focus formation requires ataxia telangiectasia mutated and ataxia telangiectasia mutated and Rad3-related. Molecular Biology of the Cell 16: 25662576.
  • Garcia V, Bruchet H, Camescasse D, Granier F, Bouchez D, Tissier A. 2003. At ATM is essential for meiosis and the somatic response to DNA damage in plants. The Plant Cell 15: 119132.
  • Ikura T, Tashiro S, Kakino A, Shima H, Jacob N, Amunugama R, Yoder K, Izumi S, Kuraoka I, Tanaka K, et al. 2007. DNA damage-dependent acetylation and ubiquitination of H2AX enhances chromatin dynamics. Molecular and Cellular Biology 27: 70287040.
  • Iliakis G. 2010. The anatomy and cell cycle evolution of DNA damage signaling and repair foci. Cell Cycle 9: 444445.
  • Karimi M, Inze D, Depicker A. 2002. GATEWAY vectors for Agrobacterium-mediated plant transformation. Trends in Plant Science 7: 193195.
  • Kinner A, Wu W, Staudt C, Iliakis G. 2008. Gamma-H2AX in recognition and signaling of DNA double-strand breaks in the context of chromatin. Nucleic Acids Research 36: 56785694.
  • Kobayashi J, Tauchi H, Sakamoto S, Nakamura A, Morishima K, Matsuura S, Kobayashi T, Tamai K, Tanimoto K, Komatsu K. 2002. NBS1 localizes to gamma-H2AX foci through interaction with the FHA/BRCT domain. Current Biology 12: 18461851.
  • Kolas NK, Chapman JR, Nakada S, Ylanko J, Chahwan R, Sweeney FD, Panier S, Mendez M, Wildenhain J, Thomson TM et al. 2007. Orchestration of the DNA-damage response by the RNF8 ubiquitin ligase. Science 318: 16371640.
  • Kong LJ, Chang JT, Bild AH, Nevins JR. 2007. Compensation and specificity of function within the E2F family. Oncogene 26: 321327.
  • Lincker F, Philipps G, Chaboute ME. 2004. UV-C response of the ribonucleotide reductase large subunit involves both E2F-mediated gene transcriptional regulation and protein subcellular relocalization in tobacco cells. Nucleic Acids Research 32: 14301438.
  • Lincker F, Roa H, Lang J, Sanchez-Calderon L, Smetana O, Cognat V, Keller M, Mediouni C, Houlné G, Chaboute ME. 2008. Plant E2F factors in cell cycle development and DNA damage response. In: Yoshida K, ed. Control of cellular physiology by transcription factors E2F. Kerala, India: Research Signpost, 1731.
  • Lisby M, Barlow JH, Burgess RC, Rothstein R. 2004. Choreography of the DNA damage response: spatiotemporal relationships among checkpoint and repair proteins. Cell 118: 699713.
  • Liu K, Lin FT, Ruppert JM, Lin WC. 2003. Regulation of E2F1 by BRCT domain-containing protein TopBP1. Molecular and Cellular Biology 23: 32873304.
  • Lobrich M, Shibata A, Beucher A, Fisher A, Ensminger M, Goodarzi AA, Barton O, Jeggo PA. 2010. gammaH2AX foci analysis for monitoring DNA double-strand break repair: strengths, limitations and optimization. Cell Cycle 9: 662669.
  • Mariconti L, Pellegrini B, Cantoni R, Stevens R, Bergounioux C, Cella R, Albani D. 2002. The E2F family of transcription factors from Arabidopsis thaliana. Novel and conserved components of the retinoblastoma/E2F pathway in plants. Journal of Biological Chemistry 277: 99119919.
  • Nakamura AJ, Rao VA, Pommier Y, Bonner WM. 2010. The complexity of phosphorylated H2AX foci formation and DNA repair assembly at DNA double-strand breaks. Cell Cycle 9: 389397.
  • Niida H, Nakanishi M. 2006. DNA damage checkpoints in mammals. Mutagenesis 21: 39.
  • Orsburn B, Escudero B, Prakash M, Gesheva S, Liu G, Huso DL, Franco S. 2010. Differential requirement for H2AX and 53BP1 in organismal development and genome maintenance in the absence of poly(ADP)ribosyl polymerase 1. Molecular and Cellular Biology 30: 23412352.
  • Parizotto EA, Dunoyer P, Rahm N, Himber C, Voinnet O. 2004. In vivo investigation of the transcription, processing, endonucleolytic activity, and functional relevance of the spatial distribution of a plant miRNA. Genes and Development 18: 22372242.
  • Pinto DM, Flaus A. 2010. Structure and function of histone H2AX. Subcellular Biochemistry 50: 5578.
  • Proust J, Houlne G, Schantz ML, Shen WH, Schantz R. 1999. Regulation of biosynthesis and cellular localization of Sp32 annexins in tobacco BY2 cells. Plant Molecular Biology 39: 361372.
  • Ricaud L, Proux C, Renou JP, Pichon O, Fochesato S, Ortet P, Montane MH. 2007. ATM-mediated transcriptional and developmental responses to gamma-rays in Arabidopsis. PLoS ONE 2: e430.
  • Roa H, Lang J, Culligan KM, Keller M, Holec S, Cognat V, Montane MH, Houlne G, Chaboute ME. 2009. Ribonucleotide reductase regulation in response to genotoxic stress in Arabidopsis. Plant Physiology 151: 461471.
  • Rogakou EP, Boon C, Redon C, Bonner WM. 1999. Megabase chromatin domains involved in DNA double-strand breaks in vivo. Journal of Cell Biology 146: 905916.
  • Sarkaria JN, Busby EC, Tibbetts RS, Roos P, Taya Y, Karnitz LM, Abraham RT. 1999. Inhibition of ATM and ATR kinase activities by the radiosensitizing agent, caffeine. Cancer Reseach 59: 43754382.
  • Sekine M, Ito M, Uemukai K, Maeda Y, Nakagami H, Shinmyo A. 1999. Isolation and characterization of the E2F-like gene in plants. FEBS Letters 460: 117122.
  • Shechter D, Chitta RK, Xiao A, Shabanowitz J, Hunt DF, Allis CD. 2009. A distinct H2A.X isoform is enriched in Xenopus laevis eggs and early embryos and is phosphorylated in the absence of a checkpoint. Proceedings of the National Academy of Sciences, USA 106: 749754.
  • Stevens C, La Thangue NB. 2004. The emerging role of E2F-1 in the DNA damage response and checkpoint control. DNA Repair 3: 10711079.
  • Stewart GS, Wang B, Bignell CR, Taylor AM, Elledge SJ. 2003. MDC1 is a mediator of the mammalian DNA damage checkpoint. Nature 421: 961966.
  • Stucki M, Clapperton JA, Mohammad D, Yaffe MB, Smerdon SJ, Jackson SP. 2005. MDC1 directly binds phosphorylated histone H2AX to regulate cellular responses to DNA double-strand breaks. Cell 123: 12131226.
  • Vissers JH, Nicassio F, van Lohuizen M, Di Fiore PP, Citterio E. 2008. The many faces of ubiquitinated histone H2A: insights from the DUBs. Cell Division 3: 8.
  • Wang C, Liu Z. 2006. Arabidopsis ribonucleotide reductases are critical for cell cycle progression, DNA damage repair, and plant development. The Plant Cell 18: 350365.
  • Ward IM, Chen J. 2001. Histone H2AX is phosphorylated in an ATR-dependent manner in response to replication stress. Journal of Biological Chemistry 276: 4775947762.
  • Waterworth WM, Altun C, Armstrong SJ, Roberts N, Dean PJ, Young K, Weil CF, Bray CM, West CE. 2007. NBS1 is involved in DNA repair and plays a synergistic role with ATM in mediating meiotic homologous recombination in plants. The Plant Journal 52: 4152.
  • Yoshiyama K, Conklin PA, Huefner ND, Britt AB. 2009. Suppressor of gamma response 1 (SOG1) encodes a putative transcription factor governing multiple responses to DNA damage. Proceedings of the National Academy of Sciences, USA 106: 1284312848.