Genomic profiling of rice sperm cell transcripts reveals conserved and distinct elements in the flowering plant male germ lineage
Version of Record online: 20 JUN 2012
© 2012 The Authors. New Phytologist © 2012 New Phytologist Trust
Volume 195, Issue 3, pages 560–573, August 2012
How to Cite
Russell, S. D., Gou, X., Wong, C. E., Wang, X., Yuan, T., Wei, X., Bhalla, P. L. and Singh, M. B. (2012), Genomic profiling of rice sperm cell transcripts reveals conserved and distinct elements in the flowering plant male germ lineage. New Phytologist, 195: 560–573. doi: 10.1111/j.1469-8137.2012.04199.x
- Issue online: 9 JUL 2012
- Version of Record online: 20 JUN 2012
- Received: 19 February 2012, Accepted: 29 April 2012
Fig. S1 Signal profiles of probe sets present in tissues of rice according to Affymetrix rice genome GeneChip and NCBI GEO data.
Fig. S2 Relative expression of probe sets encoding PAZ domain-containing proteins involved in RNA processing.
Fig. S3 Comparison of genes in each functional category by percentage according to GeneBins analysis of Arabidopsis (Borges et al., 2008) and Oryza sativa sperm cells.
Fig. S4 Comparison of number of genes in each functional category according to GeneBins analysis of isolated Arabidopsis (Borges et al., 2008) and Oryza sativa sperm cells.
Table S1 Highly up-regulated sperm transcripts, homologies, and occurrence in prior male germ lineage studies
Table S2 Comparison of functional category enrichment and depletion among the sperm cell, seedling and pollen
Table S3 Transcriptional profile of rice sperm, pollen and seedling (Excel spreadsheet)
Table S4 Depleted GO categories in sperm cells and pollen (Excel spreadsheet)
Table S5 List of primers used for RT-PCR and qPCR validations
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