These authors contributed equally to this work.
Comparative analysis of mitochondrial genomes of Rhizophagus irregularis – syn. Glomus irregulare – reveals a polymorphism induced by variability generating elements
Article first published online: 12 SEP 2012
© 2012 The Authors. New Phytologist © 2012 New Phytologist Trust
Volume 196, Issue 4, pages 1217–1227, December 2012
How to Cite
Formey, D., Molès, M., Haouy, A., Savelli, B., Bouchez, O., Bécard, G. and Roux, C. (2012), Comparative analysis of mitochondrial genomes of Rhizophagus irregularis – syn. Glomus irregulare – reveals a polymorphism induced by variability generating elements. New Phytologist, 196: 1217–1227. doi: 10.1111/j.1469-8137.2012.04283.x
- Issue published online: 5 NOV 2012
- Article first published online: 12 SEP 2012
- Manuscript Accepted: 16 JUL 2012
- Manuscript Received: 14 JUN 2012
- FUI project
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Fig. S1 Fungal phylogeny based on comparison of the concatenation of the 14 amino acid sequences of conserved mitochondrial genes (CMGs).
Fig. S2 Unrooted phylogenetic trees based on mitochondrial large subunit (mtLSU) ribosomal (a) and conserved mitochondrial gene (CMG) (b) sequences of mt genomes of six strains of Rhizophagus irregularis.
Fig. S3 Phylogenetic tree of Rhizophagus species based on nuclear internal transcribed spacers using parsimony analysis.
Fig. S4 Mitochondrial genome map of the different Rhizophagus irregularis strains studied.
Fig. S5 Distribution of small inverted repeats (SIRs) depending on the type and insertion locus in different strains of Rhizophagus irregularis.
Fig. S6 Electrophoresis gels of PCR amplicons from one spore of Rhizophagus irregularis.
Fig. S7 Rhizophagus irregularis strain typing by length polymorphism analysis.
Table S1 List of PCR primers used for the typing and identification of the different strains of Rhizophagus irregularis
Table S2 Summary of microsatellite allele size observed for 16 loci (Mathimaran et al., 2008) from nuclear gDNA of five strains of Rhizophagus irregularis