Literature Cited

  • Blaser, M. J., and S. Falkow. 2009. What are the consequences of the disappearing human microbiota? Nature Reviews Microbiology 7:887894.
  • Chalifoux, L. V., R. T. Bronson, A. Escajadillo, and S. McKenna. 1982. An analysis of the association of gastroenteric lesions with chronic wasting syndrome of marmosets. Veterinary Pathology Supplement (supplement) 7:141162.
  • Costello, E. K., C. L. Lauber, M. Hamady, N. Fierer, J. I. Gordon, and R. Knight. 2009. Bacterial community variation in human body habitats across space and time. Science 326:16941697.
  • Dethlefsen, L., P. B. Eckburg, E. M. Bik, and D.A. Relman. 2006. Assembly of the human intestinal microbiota. Trends in Ecology & Evolution 21:517523.
  • Dethlefsen, L., M. McFall-Ngai, and D. A. Relman. 2007. An ecological and evolutionary perspective on human-microbiome mutualism and disease. Nature 449:811818.
  • Faith, L. L., N. P. McNulty, F. E. Rey, and J. I. Gordon, 2011. Predicting a human gut microbiota's response to diet in gnotobiotic mice. Science 333:101104.
  • Foxman, B., and D. Goldberg. 2010. Why the human microbiome project should motivate epidemiologists to learn ecology. Epidemiology 21:757759.
  • Gaskins, H. R., C. T. Collier, and D. B. Anderson. 2002. Antibiotics as growth promotants: mode of action. Animal Biotechnology 13:2942.
  • Gonzalez, A., J. C. Clemente, A. Shade, J. L. Metcalf, S. Song, B. Prithiviraj, B. E. Palmer, and R. Knight. 2011. Our microbial selves: what ecology can teach us. Report. European Molecular Biology Association, Heidelberg .
  • Hehemann, J. H., G. Correc, T. Barbeyron, W. Helbert, M. Czjzek, and G. Michel. 2010. Transfer of carbohydrate-active enzymes from marine bacteria to Japanese gut microbiota. Nature 464:908912.
  • Jones, K. E., N. G. Patel, M. A. Levy, A. Storeygard, D. Balk, J. L. Gittleman, and P. Daszak. 2008. Global trends in emerging infectious diseases. Nature 451:990995.
  • Keesing, F., et al. 2010. Impacts of biodiversity on the emergence and transmission of infectious diseases. Nature 468:647652.
  • Ley, R. E., M. Hamady, C. Lozupone, P. J. Tumbaugh, R. R. Ramey, J. S. Bircher, M. L. Schlegel, T. A. Tucker, M. D. Schrenzel, and J. I. Gordon. 2008. Evolution of mammals and their gut microbes. Science 320:16471651.
  • Muegge, B. D., J. Kuczynski, D. Knights, J. C. Clemente, A. Gonzalez, L. Fontana, B. Henrissat, R. Knight, and J. I. Gordon. 2011. Diet drives convergence in gut microbiome functions across mammalian phylogeny and within humans. Science 332:970973.
  • Sousa, T., R. Paterson, V. Moore, A. Carlsson, B. Abrahamsson, and A. W. Basit. 2008. The gastrointestinal microbiota as a site for the biotransformation of drugs. International Journal of Pharmaceutics 363:125.
  • Turnbaugh, P. J., R. E. Ley, M. Hamady, C. M. Fraser-Liggett, R. Knight, and J. I. Gordon. 2007. The human microbiome project. Nature 449:804810.
  • Woodworth, L. M., M. E. Montgomery, D. A. Briscoe, and R. Frankham. 2002. Rapid genetic deterioration in captive populations: causes and conservation implications. Conservation Genetics 3:277288.