SEARCH

SEARCH BY CITATION

References

  • Abercrombie DL, Clarke SC, Shivji MS. 2005. Global-scale genetic identification of hammerhead sharks: application to assessment of the international fin trade and law enforcement. Conserv Gen 6:77588.
  • Ahmed MMM, Ali BA, El-Zaeem S. 2004. Application of RAPD markers in fish: part I - some genera (Tilapia, Sarotherodon and Oreochromis) and species (Oreochromis aureus and Oreochromis niloticus) of tilapia. Int J Biotechnol 6:8693.
  • Akasaki T, Yanagimoto T, Yamakami K, Tomonaga H, Sato S. 2006. Species identification and PCR-RFLP analysis of cytochrome b gene in cod fish (order Gadiformes) products. J Food Sci 71(3):C1905.
  • Ali BA, Huang TH, Qin DN, Wang XM. 2004. A review of random amplified polymorphic DNA (RAPD) markers in fish research. Rev Fish Biol 14:44353.
  • Applewhite L, Bennett S. 2008. Species identification programs for the seafood industry [abstract]. Presented at the 59th Pacific Fisheries Technologists Annual Meeting. February 3–6; San Francisco , Calif .
  • Apte A, Daniel S. 2003. PCR primer design. In: DieffenbachCW, DvekslerGS, editors. PCR primer: a laboratory manual. 2nd ed. New York : Cold Spring Harbor. p 6174.
  • Aranishi F. 2005. Rapid PCR-RFLP method for discrimination of imported and domestic mackerel. Mar Biotech 7(6):5715.
  • Aranishi F, Okimoto T. 2004. PCR-based detection of allergenic mackerel ingredients in seafood. J Genet 83(2):1935.
  • Aranishi F, Okimoto T, Izumi S. 2005a. Identification of gadoid species (Pisces, Gadidae) by PCR-RFLP analysis. J Appl Genet 46(1):6973.
  • Aranishi F, Okimoto T, Ohkubo M, Izumi S. 2005b. Molecular identification of commercial spicy pollack roe products by PCR-RFLP analysis. J Food Sci 70(4):C2358.
  • Aranishi F, Okimoto T, Ohkubo M. 2006. A short-cut DNA extraction from cod caviar. J Sci Food Agric 86:4258.
  • Arya M, Shergill IS, Williamson M, Gommersall L, Arya N, Patel HR. 2005. Basic principles of real-time quantitative PCR. Expert Rev Mol Diagn 5(2):20919.
  • Asensio L. 2007. Application of multiplex PCR for the identification of grouper meals in the restaurant industry. Food Control. doi:DOI: 10.1016/j.foodcont.2007.11.002.
  • Asensio L, Gonzalez I, Fernandez A, Cespedes A, Rodriguez MA, Hernandez PE, Garcia T, Martin R. 2001. Identification of Nile perch (Lates niloticus), grouper (Epinephelus guaza), and wreck fish (Polyprion americanus) fillets by PCR amplification of the 5S rDNA gene. J AOAC Int 84(3):77781.
  • Asensio L, Gonzalez I, Rodriguez MA, Mayoral B, Lopez-Calleja I, Hernandez PE, Garcia T, Martin R. 2003. Identification of grouper (Epinephelus guaza), wreck fish (Polyprion americanus), and Nile perch (Lates niloticus) fillets by polyclonal antibody-based enzyme-linked immunosorbent assay. J Agric Food Chem 51(5):116972.
  • Baker CS, Lento GM, Cipriano F, Palumbi SR. 2000. Predicted decline of protected whales based on molecular genetic monitoring of Japanese and Korean markets. Proc R Soc Lond B 267(1449):11919.
  • Bartlett SE, Davidson WS. 1992. FINS (forensically informative nucleotide sequencing): a procedure for identifying the animal origin of biological specimens. Bio Tech 12(3):40811.
  • Beacham TD, Pollard S, Le KD. 2000. Microsatellite DNA population structure and stock identification of steelhead trout (Oncorhynchus mykiss) in the Nass and Skeena rivers in northern British Columbia. Mar Biotech 2(6):587600.
  • Beacham TD, Le KD, Candy JR. 2004. Population structure and stock identification of steelhead trout (Oncorhynchus mykiss) in British Columbia and the Columbia River based on microsatellite variation. Environ Biol Fish 69:95109.
  • Beacham TD, Hay DE, Le KD. 2005. Population structure and stock identification of eulachon (Thaleichthys pacificus), an anadromous smelt, in the Pacific Northwest. Mar Biotech 7(4):36372.
  • Bensch S, Akesson M. 2005. Ten years of AFLP in ecology and evolution: why so few animals? Mol Ecol 14(10):2899914.
  • Blears MJ, De Grandis SA, Lee H, Trevors JT. 1998. Amplified fragment length polymorphism (AFLP): a review of the procedure and its applications. J Indust Microbiol Biotechnol 21:99114.
  • Borgo R, Souty-Grosset C, Bouchon D, Gomot L. 1996. PCR-RFLP analysis of mitochondrial DNA for identification of snail meat species. J Food Sci 61(1):14.
  • Bossier P. 1999. Authentication of seafood products by DNA patterns. J Food Sci 64(2):18993.
  • Brown B, Epifanio J. 2003. Nuclear DNA. In: HallermanEM, editor. Population genetics: principles and applications for fisheries scientists. Bethesda , Md. : American Fisheries Society. p 10123.
  • Bucklin KA, Banks MA, Hedgecock D. 2007. Assessing genetic diversity of protected coho salmon (Oncorhynchus kisutch) populations in California. Can J Fish Aquat Sci 64(1):3042.
  • Calo-Mata P, Sotelo CG, Perez-Martin RI, Rehbein H, Hold GL, Russell VJ, Pryde S, Quinteiro J, Rey-Mendez M, Rosa C, Santos AT. 2003. Identification of gadoid fish species using DNA-based techniques. Eur Food Res Technol 217:25964.
  • Carrera E, Garcia T, Cespedes A, Gonzalez I, Sanz B, Hernandez P, Martin R. 1997. Immunostick colorimetric ELISA assay for the identification of smoked salmon (Salmo salar), trout (Oncorhynchus mykiss) and bream (Brama raii). J Sci Food Agric 74:54750.
  • Carrera E, Garcia T, Cespedes A, Gonzalez I, Fernandez A, Hernandez PE, Martin R. 1999a. PCR-RFLP of the mitochondrial cytochrome oxidase gene: a simple method for discrimination between Atlantic salmon (Salmo salar) and rainbow trout (Oncorhynchus mykiss). J Sci Food Agric 79:16548.
  • Carrera E, Garcia T, Cespedes A, Gonzalez I, Fernandez A, Hernandez PE, Martin R. 1999b. Salmon and trout analysis by PCR-RFLP for identity authentication. J Food Sci 64(3):4103.
  • Carrera E, Garcia T, Cespedes A, Gonzalez I, Fernandez A, Asensio LM, Hernandez PE, Martin R. 2000a. Differentiation of smoked Salmo salar, Oncorhynchus mykiss and Brama raii using the nuclear marker 5S rDNA. Int J Food Sci Technol 35:4016.
  • Carrera E, Garcia T, Cespedes A, Gonzalez I, Fernandez A, Asensio LM, Hernandez PE, Martin R. 2000b. Identification of smoked Atlantic salmon (Salmo salar) and rainbow trout (Oncorhynchus mykiss) using PCR-restriction fragment length polymorphism of the p53 gene. J AOAC Int 83(2):3416.
  • Castillo AG, Martinez JL, Garcia-Vazquez E. 2003. Identification of Atlantic hake species by a simple PCR-based methodology employing microsatellite loci. J Food Prot 66(11):21304.
  • Cespedes A, Garcia T, Carrera E, Gonzalez I, Sanz B, Hernandez PE, Martin R. 1998a. Identification of flatfish species using polymerase chain reaction (PCR) amplification and restriction analysis of the cytochrome b gene. J Food Sci 63(2):2069.
  • Cespedes A, Garcia T, Carrera E, Gonzalez I, Sanz B, Hernandez PE, Martin R. 1998b. Polymerase chain reaction-restriction fragment length polymorphism analysis of a short fragment of the cytochrome b gene for identification of flatfish species. J Food Prot 61(12):16845.
  • Cespedes A, Garcia T, Carrera E, Gonzalez I, Fernandez A, Hernandez PE, Martin R. 1999. Identification of sole (Solea solea) and Greenland halibut (Reinhardtius hippoglossoides) by PCR amplification of the 5S rDNA gene. J Agric Food Chem 47(3):104650.
  • Cespedes A, Garcia T, Carrera E, Gonzalez I, Fernandez A, Asensio L, Hernandez PE, Martin R. 2000. Genetic differentiation between sole (Solea solea) and Greenland halibut (Reinhardtius hippoglossoides) by PCR-RFLP analysis of a 12S rRNA gene fragment. J Sci Food Agric 80:2932.
  • Chakraborty A, Aranishi F, Iwatsuki Y. 2005. Molecular identification of hairtail species (Pisces: Trichiuridae) based on PCR-RFLP analysis of the mitochondrial 16S rRNA gene. J Appl Genet 46(4):3815.
  • Chapela MJ, Sotelo CG, Calo-Mata P, Perez-Martin RI, Rehbein H, Hold GL, Quinteiro J, Rey-Mendez M, Rosa C, Santos AT. 2002. Identification of cephalopod species (Ommastrephidae and Loliginidae) in seafood products by forensically informative nucleotide sequencing (FINS). J Food Sci 67(5):16726.
  • Chapela MJ, Sotelo CG, Perez-Martin RI. 2003. Molecular identification of cephalopod species by FINS and PCR-RFLP of a cytochrome b gene fragment. Eur Food Res Technol 217:5249.
  • Chapela MJ, Sotelo CG, Perez-Martin RI, Pardo MA, Perez-Villareal B, Gilardi P, Riese J. 2007. Comparison of DNA extraction methods from muscle of canned tuna for species identification. Food Control 18:12115.
  • Chow S, Nohara K, Tanabe T, Itoh T, Tsuji S, Nishikawa Y, Uyeyanagi S, Uchikawa K. 2003. Genetic and morphological identification of larval and small juvenile tunas (Pisces: Scombridae) caught by a mid-water trawl in the western Pacific. Bull Fish Res Agen 8:114.
  • Civera T. 2003. Species identification and safety of fish products. Vet Res Commun 27:4819.
  • Clarke SC, Magnussen JE, Abercrombie DL, McAllister MK, Shivji MS. 2006. Identification of shark species composition and proportion in the Hong Kong shark fin market based on molecular genetics and trade records. Conserv Biol 20(1):20111.
  • Comesana AS, Abella P, Sanjuan A. 2003. Molecular identification of five commercial flatfish species by PCR-RFLP analysis of a 12S rRNA gene fragment. J Sci Food Agric 83:7529.
  • Dawnay N, Ogden R, McEwing R, Carvalho GR, Thorpe RS. 2007. Validation of the barcoding gene COI for use in forensic genetic species identification. Forensic Sci Int 173(1):16.
  • DeSalle R, Egan MG, Siddall M. 2005. The unholy trinity: taxonomy, species delimitation and DNA barcoding. Phil Trans R Soc B 360(1462):190516.
  • Dooley JJ, Garrett SD. 2001. Development of meat speciation assays using the Agilent 2100 bioanalyser. Agilent Technologies application note no 5988–4069EN.
  • Dooley JJ, Garrett SD, Brown HM. 2003. Development of molecular markers suitable for the detection of olive oil adulteration with hazelnut oil. Final report for Food Standards Agency project no Q01060.
  • Dooley JJ, Sage HD, Brown HM, Garrett SD. 2005a. Improved fish species identification by use of lab-on-a-chip technology. Food Control 16:6017.
  • Dooley JJ, Sage HD, Clarke MA, Brown HM, Garrett SD. 2005b. Fish species identification using PCR-RFLP analysis and lab-on-a-chip capillary electrophoresis: application to detect white fish species in food products and an interlaboratory study. J Agric Food Chem 53(9):334857.
  • Fernandez A, Garcia T, Asensio L, Rodriguez MA, Gonzalez I, Cespedes A, Hernandez PE, Martin R. 2000. Identification of the clam species Ruditapes decussatus (grooved carpet shell), Venerupis pullastra (pullet carpet shell), and Ruditapes philippinarum (Japanese carpet shell) by PCR-RFLP. J Agric Food Chem 48(8):333641.
  • Fernandez A, Garcia T, Gonzalez I, Asensio L, Rodriguez MA, Hernandez PE, Martin R. 2002. Polymerase chain reaction-restriction fragment length polymorphism analysis of a 16S rRNA gene fragment for authentication of four clam species. J Food Protect 65(4):6925.
  • Gil LA. 2007. PCR-based methods for fish and fishery products authentication. Trends Food Sci Technol 18:55866.
  • Gilliland G, Perrin S, Blanchard K, Bunn HF. 1990. Analysis of cytokine mRNA and DNA: detection and quantitation by competitive polymerase chain reaction. Proc Natl Acad Sci USA 87(7):27259.
  • Gopalakrishnan A, Abdul Muneer PM, Musammilu KK, Lal KK, Kapoor D, Mohindra V. 2006. Primers from the orders Osteoglossiform and Siluriform detect polymorphic microsatellite loci in sun-catfish, Horabagrus brachysoma (Teleostei: Bagridae). J Appl Ichthyol 22(5):4568.
  • Greig C, Robertson JM, Banks MA. 2002. Rapid PCR-based species tests for threatened sympatric salmonids. Conserv Gen 3:836.
  • Greig C, Jacobson DP, Banks MA. 2003. New tetranucleotide microsatellites for fine-scale discrimination among endangered chinook salmon (Oncorhynchus tshawytscha). Mol Ecol Notes 3(3):3769.
  • Han K, Ely B. 2002. Use of AFLP analyses to assess genetic variation in Morone and Thunnus species. Mar Biotech 4(2):1415.
  • He C, Chen L, Simmons M, Li P, Kim S, Liu ZJ. 2003. Putative SNP discovery in interspecific hybrids of catfish by comparative EST analysis. Anim Genet 34(6):4458.
  • Hird HJ, Hold GL, Chisholm J, Reece P, Russell VJ, Brown J, Goodier R, MacArthur R. 2005. Development of a method for the quantification of haddock (Melanogrammus aeglefinus) in commercial products using real-time PCR. Eur Food Res Technol 220:6337.
  • Horstkotte B, Rehbein H. 2003. Fish species identification by means of restriction fragment length polymorphism and high-performance liquid chromatography. J Food Sci 68(9):265866.
  • Hsieh HS, Chai T, Cheng CA, Hsieh YW, Hwang DF. 2004. Application of DNA technique for identifying the species of different processed products of swordfish meat. J Food Sci 69(1):FCT16.
  • Hsieh HS, Chai TJ, Hwang DF. 2007. Using the PCR-RFLP method to identify the species of different processed products of billfish meats. Food Control 18:36974.
  • Hubner P, Studer E, Luthy J. 1999. Quantitative competitive PCR for the detection of genetically modified organisms in food. Food Control 10(6):3538.
  • Imai H, Cheng JH, Hamasaki K, Numachi KI. 2004. Identification of four mud crab species (genus Scylla) using ITS-1 and 16S rDNA markers. Aquat Living Resour 17:314.
  • Imsiridou A, Hardy H, Maudling N, Amoutzias G, Zaldivar Comenges JM. 2003. Web database of molecular genetic data from fish stocks. J Heredity 94(3):2657.
  • Itoi S, Nakaya M, Kaneko G, Kondo H, Sezaki K, Watabe S. 2005. Rapid identification of eels Anguilla japonica and Anguilla anguilla by polymerase chain reaction with single nucleotide polymorphism-based specific probes. Fish Sci 71:135664.
  • Ivanova NV, Zemlak TS, Hanner RH, Hebert PDN. 2007. Universal primer cocktails for fish DNA barcoding. Mol Ecol Notes 7:5448.
  • Jenneckens I, Meyer JN, Horstgen-Schwark G, May B, Debus ML, Wedekind H, Ludwig A. 2001. A fixed allele at microsatellite locus LS-39 exhibiting species-specificity for the black caviar producer Acipenser stellatus. J Appl Ichthyol 17:3942.
  • Jerome M, Lemaire C, Verrez-Bagnis V, Etienne M. 2003. Direct sequencing method for species identification of canned sardine and sardine-type products. J Agric Food Chem 51(25):732632.
  • Karaiskou N, Apostolidis AP, Triantafyllidis A, Kouvatsi A, Triantaphyllidis C. 2003. Genetic identification and phylogeny of three species of the genus Trachurus based on mitochondrial DNA analysis. Mar Biotech 5(5):493504.
  • Klinbunga S, Pripue P, Khamnamtong N, Puanglarp N, Tassanakajon A, Jarayabhand P, Hirono I, Aoki T, Menasveta P. 2003. Genetic diversity and molecular markers of the tropical abalone (Haliotis asinina) in Thailand. Mar Biotech 5(5):50517.
  • Kochzius M, Nölte M, Weber H, Silkenbeumer N, Hjörleifsdottir S, Hreggvidsson GO, Marteinsson V, Kappel K, Planes S, Tinti F, Magoulas A, Garcia Vazquez E, Turan C, Hervet C, Campo Falgueras D, Antoniou A, Landi M, Blohm D. 2008. DNA microarrays for identifying fishes. Mar Biotechnol 10:207217.
  • Kyle CJ, Wilson CC. 2007. Mitochondrial DNA identification of game and harvested freshwater fish species. Forensic Sci Int 166(1):6876.
  • Lai RY, Lagally ET, Lee SH, Soh HT, Plaxco KW, Heeger AJ. 2006. Rapid, sequence-specific detection of unpurified PCR amplicons via a reusable, electrochemical sensor. PNAS 103(11):401721.
  • Lal KK, Chauhan T, Mandal A, Singh RK, Khulbe L, Ponniah AG, Mohindra V. 2004. Identification of microsatellite DNA markers for population structure analysis in Indian major carp, Cirrhinus mrigala (Hamilton-Buchanan, 1982). J Appl Ichthyol 20(2):8791.
  • Laube I, Zagon J, Broll H. 2007a. Quantitative determination of commercially relevant species in foods by real-time PCR. Int J Food Sci Technol 42:33641.
  • Laube I, Zagon J, Spiegelberg A, Butschke A, Kroh LW, Broll H. 2007b. Development and design of a “ready-to-use” reaction plate for a PCR-based simultaneous detection of animal species in foods. Int J Food Sci Technol 42:917.
  • Lenstra JA. 2003. DNA methods for identifying plant and animal species in food. In: LeesM, editor. Food authenticity and traceability. Cambridge , U.K. : Woodhead Publishing Ltd. p 3453.
  • Li L, Guo X. 2004. AFLP-based genetic linkage maps of the pacific oyster Crassostrea gigas Thunberg. Mar Biotech 6(1):2636.
  • Lin WF, Hwang DF. 2007. Application of PCR-RFLP analysis on species identification of canned tuna. Food Control 18:10507.
  • Lin YS, Poh YP, Lin SM, Tzeng CS. 2002. Molecular techniques to identify freshwater eels: RFLP analyses of PCR-amplified DNA fragments and allele-specific PCR from mitochondrial DNA. Zool Stud 41(4):42130.
  • Liu ZJ, Cordes JF. 2004. DNA marker technologies and their applications in aquaculture genetics. Aquaculture 238:137.
  • Liu ZJ, Nichols A, Li P, Dunham RA. 1998a. Inheritance and usefulness of AFLP markers in channel catfish (Ictalurus punctatus), blue catfish (I. furcatus), and their F1, F2, and backcross hybrids. Mol Gen Genet 258(3):2608.
  • Liu ZJ, Li P, Argue B, Dunham R. 1998b. Inheritance of RAPD markers in channel catfish (Ictalurus punctatus), blue catfish (I. furcatus), and their F1, F2 and backcross hybrids. Anim Genet 29:5862.
  • Lockley AK, Bardsley RG. 2000. DNA-based methods for food authentication. Trends Food Sci Technol 11:6777.
  • Lopez I, Pardo MA. 2005. Application of relative quantification TaqMan real-time polymerase chain reaction technology for the identification and quantification of Thunnus alalunga and Thunnus albacares. J Agric Food Chem 53(11):455460.
  • Mabuchi K, Okuda N, Kokita T, Nishida M. 2003. Genetic comparison of two color-morphs of Apogon properuptus from southern Japan. Ichthyol Res 50:2936.
  • Mackie IM, Pryde SE, Gonzales-Sotelo C, Medina I, Perez-Martin RI, Quinteiro J, Rey-Mendez M, Rehbein H. 1999. Challenges in the identification of species of canned fish. Trends Food Sci Technol 10:914.
  • Maes GE, Pujolar JM, Raeymaekers JAM, Dannewitz J, Volckaert FAM. 2006. Microsatellite conservation and Bayesian individual assignment in four Anguilla species. Mar Ecol Prog Ser 319:25161.
  • Mafra I, Ferreira IM, Oliveira MB. 2007. Food authentication by PCR-based methods. Eur Food Res Technol published online: 30 October 2007.
  • Magnussen JE, Pikitch EK, Clarke SC, Nicholson C, Hoelzel AR, Shivji MS. 2007. Genetic tracking of basking shark products in international trade. Anim Conserv 10:199207.
  • Marmiroli N, Peano C, Maestri E. 2003. Advanced PCR techniques in identifying food components. In: LeesM, editor. Food authenticity and traceability. Cambridge , U.K. : Woodhead Publishing Ltd. p 333.
  • Marras SA, Tyagi S, Kramer FR. 2006. Real-time assays with molecular beacons and other fluorescent nucleic acid hybridization probes. Clinica Chimica Acta 363(1–2):4860.
  • Martinez I, James D, Loreal H. 2005. Application of modern analytical techniques to ensure seafood safety and authenticity. FAO fisheries technical paper nr 455. Rome , Italy : FAO. 73 p.
  • McDowell DG, Parkes HC, Archard CL, Birch L. 2001. Evaluation of LabChip technology for GMO analysis in food. Food Control 12(8):53540.
  • Moran P, Garcia-Vazquez E. 2006. Identification of highly prized commercial fish using a PCR-based methodology. Biochem Mol Biol Educat 34(2):1214.
  • Moretti VM, Turchini GM, Bellagamba F, Caprino F. 2003. Traceability issues in fishery and aquaculture products. Vet Res Com 27(Suppl 1):497505.
  • Nagaraj SH, Gasser RB, Ranganathan S. 2007. A hitchhiker's guide to expressed sequence tag (EST) analysis. Brief Bioinform 8(1):621.
  • Nijman IJ, Hogendoorn MP, Gruys E, Luikart G, Ertugrul O, Zagdsuren Y, Ngere LO, Hasima N, Erhardt G, Ajmone-Marsan P, Lenstra JA. 2002. Detection of sheep-goat interspecies hybridization by analysis of satellite DNA. Online J Vet Res 1:16.
  • Nijman IJ, Otsen M, Verkaar EL, De Ruijter C, Hanekamp E, Ochieng JW, Shamshad S, Rege JE, Hanotte O, Barwegen MW, Sulawati T, Lenstra JA. 2003. Hybridization of banteng (Bos javanicus) and zebu (Bos indicus) revealed by mitochondrial DNA, satellite DNA, AFLP and microsatellites. Heredity 90(1):106.
  • Pardo MA, Perez-Villareal B. 2004. Identification of commercial canned tuna species by restriction site analysis of mitochondrial DNA products obtained by nested primer PCR. Food Chem 86:14350.
  • Pepe T, Trotta M, Di Marco I, Cennamo P, Anastasio A, Cortesi ML. 2005. Mitochondrial cytochrome b DNA sequence variations: an approach to fish species identification in processed fish products. J Food Protect 68(2):4215.
  • Perez M, Alvarez C, Balado M, Cabado AG, Vieites JM, Presa P. 2004. Identification of South Atlantic hakes (Merluccius australis and Merluccius hubbsi) in processed foods by PCR-RFLPs of cytochrome b gene. J Aquat Food Prod Technol 13(2):5967.
  • Peter C, Brunen-Nieweler C, Cammann K, Borchers T. 2004. Differentiation of animal species in food by oligonucleotide microarray hybridization. Eur Food Res Technol 219(3):28693.
  • Quinteiro J, Sotelo CG, Rehbein H, Pryde SE, Medina I, Perez-Martin RI, Rey-Mendez M, Mackie IM. 1998. Use of mtDNA direct polymerase chain reaction (PCR) sequencing and PCR-restriction fragment length polymorphism methodologies in species identification of canned tuna. J Agric Food Chem 46:16629.
  • Quinteiro J, Vidal R, Izquierdo M, Sotelo CG, Chapela MJ, Perez-Martin RI, Rehbein H, Hold GL, Russell VJ, Pryde SE, Rosa C, Santos AT, Rey-Mendez M. 2001. Identification of hake species (Merluccius genus) using sequencing and PCR-RFLP analysis of mitochondrial DNA control region sequences. J Agric Food Chem 49(11):510814.
  • Ram JL, Ram ML, Baidoun FF. 1996. Authentication of canned tuna and bonito by sequence and restriction site analysis of polymerase chain reaction products of mitochondrial DNA. J Agric Food Chem 44:24607.
  • Ramella MS, Kroth MA, Tagliari C, Arisi ACM. 2005. Optimization of random amplified polymorphic DNA protocol for molecular identification of Lophius gastrophysus. Cienc Tecnol Aliment Campinas 25(4):7335.
  • Rapley R. 2000. Molecular biology and basic techniques. In: WilsonK, WalkerJ, editors. Principles and techniques of practical biochemistry. 5th ed. Cambridge , U.K. : Cambridge Univ. Press. p 80137.
  • Rego I, Martinez A, Gonzalez-Tizon A, Vieites J, Leira F, Mendez J. 2002. PCR technique for the identification of mussel species. J Agric Food Chem 50(7):17804.
  • Rehbein H, Kress G, Schmidt T. 1997. Application of PCR-SSCP to species identification of fishery products. J Sci Food Agric 74:3541.
  • Rehbein H, Gonzales-Sotelo C, Perez-Martin RI, Quinteiro J, Rey-Mendez M, Pryde S, Mackie IM, Santos AT. 1999a. Differentiation of sturgeon caviar by single strand conformational polymorphism (PCR-SSCP) analysis. Archiv Lebensm 50:137.
  • Rehbein H, Mackie IM, Pryde S, Gonzales-Sotelo C, Medina I, Perez-Martin RI, Quinteiro J, Rey-Mendez M. 1999b. Fish species identification in canned tuna by PCR-SSCP: validation by a collaborative study and investigation of intra-species variability of the DNA-patterns. Food Chem 64(2):2638.
  • Rehbein H, Sotelo CG, Perez-Martin RI, Chapela-Garrido MJ, Hold GL, Russell VJ, Pryde S, Santos AT, Rosa C, Quinteiro J, Rey-Mendez M. 2002. Differentiation of raw or processed eel by PCR-based techniques: restriction fragment length polymorphism analysis (RFLP) and single strand conformation polymorphism analysis (SSCP). Eur Food Res Technol 214(2):1717.
  • Renshaw MA, Saillant E, Broughton RE, Gold JR. 2006. Application of hypervariable genetic markers to forensic identification of “wild” from hatchery-raised red drum, Sciaenops ocellatus. Forensic Sci Int 156(1):915.
  • Russell VJ, Hold GL, Pryde SE, Rehbein H, Quinteiro J, Rey-Mendez M, Sotelo CG, Perez-Martin RI, Santos AT, Rosa C. 2000. Use of restriction fragment length polymorphism to distinguish between salmon species. J Agric Food Chem 48(6):21848.
  • Saitou N, Nei M. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4(4):40625.
  • Sanjuan A, Comesana AS. 2002. Molecular identification of nine commercial flaffish species by polymerase chain reaction-restriction fragment length polymorphism analysis of a segment of the cytochrome b region. J Food Prot 65(6):101623.
  • Santaclara FJ, Cabado AG, Vieites JM. 2006. Development of a method for genetic identification of four species of anchovies: E. encrasicolus, E. anchoita, E. ringens and E. japonicus. Eur Food Res Technol 223:60914.
  • Serapion J, Kucuktas H, Feng J, Liu Z. 2004. Bioinformatic mining of type I microsatellites from expressed sequence tags of channel catfish (Ictalurus punctatus). Mar Biotech 6(4):36477.
  • Sevilla RG, Diez A, Noren M, Mouchel O, Jerome M, Verrez-Bagnis V, Van Pelt H, Favre-Krey L, Krey G, The FishTrace Consortium, Bautista JM. 2007. Primers and polymerase chain reaction conditions for DNA barcoding teleost fish based on the mitochondrial cytochrome b and nuclear rhodopsin genes. Mol Ecol Notes 7:7304.
  • Shivji M, Clarke S, Pank M, Natanson L, Kohler N, Stanhope M. 2002. Genetic identification of pelagic shark body parts for conservation and trade monitoring. Conserv Biol 16(4):103647.
  • Smith PJ, McVeagh SM, Steinke D. 2008. DNA barcoding for the identification of smoked fish products. J Fish Biol 72:46471.
  • Sotelo CG, Pineiro C, Gallardo JM, Perez-Martin RI. 1993. Fish species identification in seafood products. Trends Food Sci Technol 4:395401.
  • Sotelo CG, Calo-Mata P, Chapela MJ, Perez-Martin RI, Rehbein H, Hold GL, Russell VJ, Pryde S, Quinteiro J, Izquierdo M, Rey-Mendez M, Rosa C, Santos AT. 2001. Identification of flatfish (Pleuronectiforme) species using DNA-based techniques. J Agric Food Chem 49(10):45629.
  • Sotelo CG, Chapela MJ, Rey M, Perez-Martin R. 2003. Development of an identification and quantitation system for cod (Gadus morhua) using Taqman assay. In: Proceedings of the First Trans-Atlantic Fisheries Technology Conference. June 10–14; Reykjavik , Iceland . p 1958.
  • Takeyama H, Chow S, Tsuduki H, Matsunaga T. 2001. Mitochondrial DNA sequence variation within and between Thunnus tuna species and its application to species identification. J Fish Biol 58(6):164657.
  • Tamura K, Nei M. 1993. Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees. Mol Biol Evol 10(3):51226.
  • Taylor MI, Fox C, Rico I, Rico C. 2002. Species-specific TaqMan probes for simultaneous identification of (Gadus morhua L.), haddock (Melanogrammus aeglefinus L.) and whiting (Merlangius merlangus L.). Mol Ecol Notes 2:599601.
  • Teletchea F, Maudet C, Hanni C. 2005. Food and forensic molecular identification: update and challenges. Trends Biotechnol 23(7):35966.
  • Tenge BJ, Dang NL, Fry FS, Savary WE, Rogers PL, Barnett JD, Hill WE, Wiskerchen JE, Wekell MM. 1997. Integration of computer and laboratory techniques for species identification including development of a regulatory fish encyclopedia. In: MartinRE, ColletteRL, SlavinJW, editors. Fish inspection, quality control, and HACCP—a global focus. Lancaster , Pa. : Technomic Publishing. p 21426.
  • Trotta M, Schonhuth S, Pepe T, Cortesi ML, Puyet A, Bautista JM. 2005. Multiplex PCR method for use in real-time PCR for identification of fish fillets from grouper (Epinephelus and Mycteroperca species) and common substitute species. J Agric Food Chem 53(6):203945.
  • USFDA. 2006. Seafood substitution. College Park , Md. : U.S. Food and Drug Administration Center for Food Safety and Applied Nutrition. Available from: http://www.cfsan.fda.gov/~frf/econ.html . Accessed Feb 10, 2008.
  • Verkaar EL, Boutaga K, Nijman IJ, Lenstra JA. 2001. Differentiation of bovine species in beef by PCR-RFLP of mitochondrial and satellite DNA. Meat Sci 60:3659.
  • Vos P, Hogers R, Bleeker M, Reijans M, Van De Lee T, Hornes M, Frijters A, Pot J, Peleman J, Kuiper M, Zabeau M. 1995. AFLP: a new technique for DNA fingerprinting. Nucleic Acid Res 23:440714.
  • Waldbieser GC, Bosworth BG, Nonneman DJ, Wolters WR. 2001. A microsatellite-based genetic linkage map for channel catfish, Ictalurus punctatus. Genetics 158(2):72734.
  • Williams JG, Kubelik AR, Livak KJ, Rafalski JA, Tingey SV. 1990. DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nucleic Acid Res 18(22):65315.
  • Withler RE, Beacham TD, Ming TJ, Miller KM. 1997. Species identification of Pacific salmon by means of a major histocompatibility complex gene. N Am J Fish Manage 17:92938.
  • Withler RE, Candy JR, Beacham TD, Miller KM. 2004. Forensic DNA analysis of Pacific salmonid samples for species and stock identification. Environ Biol Fish 69:27585.
  • Wolf C, Luthy J. 2001. Quantitative competitive (QC) PCR for quantification of porcine DNA. Meat Sci 57:1618.
  • Wolf C, Hubner P, Luthy J. 1999. Differentiation of sturgeon species by PCR-RFLP. Food Res Inter 32:699705.
  • Wolf C, Burgener M, Hubner P, Luthy J. 2000. PCR-RFLP analysis of mitochondrial DNA: differentiation of fish species. Lebensm Wiss Technol 33(2):14450.
  • Woolfe M, Primrose S. 2004. Food forensics: using DNA technology to combat misdescription and fraud. Trends Biotechnol 22(5):2226.
  • Yancy HF, Zemlak TS, Mason JA, Washington JD, Tenge BJ, Nguyen NT, Barnett JD, Savary WE, Hill WE, Moore MM, Fry FS, Randolph SC, Rogers PL, Hebert PDN. 2008. Potential use of DNA barcodes in regulatory science: applications of the Regulatory Fish Encyclopedia. J Food Prot 71(1):2107.
  • Young WP, Wheeler PA, Coryell VH, Keim P, Thorgaard GH. 1998. A detailed linkage map of rainbow trout produced using doubled haploids. Genetics 148(2):83950.
  • Yu Z, Guo X. 2003. Genetic linkage map of the eastern oyster Crassostrea virginica Gmelin. Biol Bull 204(3):32738.
  • Yue G, Li Y, Chen F, Cho S, Lim LC, Orban L. 2002. Comparison of three DNA marker systems for assessing genetic diversity in Asian arowana (Scleropages formosus). Electrophoresis 23(7–8):102532.
  • Zhang J, Cai Z. 2006. Differentiation of the rainbow trout (Oncorhynchus mykiss) from Atlantic salmon (Salmo salmar) by the AFLP-derived SCAR. Eur Food Res Technol 223:4137.