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Table S1. Chi-square tests on branch-based randomization analyses of the 10 additional MPTs conducted by binning branches from across all date randomizations into Devonian and post-Devonian.

Table S2. Chi-square tests on branch-based likelihood analyses of the 10 additional MPTs conducted by binning branches from across all date randomizations into Devonian and post-Devonian.

Table S3. Chi-square tests on clade-based likelihood analyses of the 10 additional MPTs conducted by binning nodes from across all date randomizations into Devonian and post-Devonian.

Figure S1. Lungfish phylogeny used for rate analyses in main text drawn against stratigraphy.

Figure S2. Branch randomization results of artificially degraded simulated data.

Figure S3. Branch likelihood results of artificially degraded simulated data.

Figure S4. Clade likelihood results of artificially degraded simulated data.

Figure S5. Character changes per lineage million years through time of complete simulated (left) and degraded simulated (right) data.

Figure S6. Results from applying the overall likelihood ratio test (LRT) for testing whether all branches have the same rate, applied to 1000 simulated datasets with equal rate branches.

Figure S7. Results from branch likelihood test applied to 1000 simulated datasets.

Figure S8. Results from clade likelihood test applied to 1000 simulated datasets.

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EVO_1460_sm_FigS3.pdf655KSupporting info item
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