SEARCH

SEARCH BY CITATION

LITERATURE CITED

  • Arnedo, M. A., I. Agnarsson, and R. G. Gillespie. 2007. Molecular insights into the phylogenetic structure of the spider genus Theridion (Araneae, Theridiidae) and the origin of the Hawaiian Theridion-like fauna. Zool. Scr. 36:337352.
  • Beerli, P. 2006. Comparison of Bayesian and maximum-likelihood inference of population genetic parameters. Bioinformatics 22:341345.
  • Beerli, P., and J. Felsenstein. 2001. Maximum-likelihood estimation of a migration matrix and effective population sizes in n subpopulations by using a coalescent approach. Proc. Natl. Acad. Sci. USA 98:45634568.
  • Beerli, P., and M. Palczewski. 2010. Unified framework to evaluate panmixia and migration direction among multiple sampling locations. Genetics 185:313326.
  • Carson, H. L., and W. E. Johnson. 1975. Genetic variation in Hawaiian Drosophila. Part 1. Chromosome and allozyme polymorphism in Drosophila setosimentum and Drosophila ochrabasis from the Island of Hawaii, USA. Evolution 29:1123.
  • Carson, H. L., J. P. Lockwood, and E. M. Craddock. 1990. Extinction and recolonization of local populations on a growing shield volcano. Proc. Natl. Acad. Sci. USA 87:70557057.
  • Clague, D. A. 1996. The growth and subsidence of the Hawaiian-Emporer volcanic chain. Pp. 3550 in A. Keast and S. E. Miller, eds. The origin and evolution of Pacific island biotas, New Guinea to Eastern Polynesia: patterns and processes. SPB Academic Publishing, Amsterdam , The Netherlands .
  • Clement, M., D. Posada, and K. A. Crandall. 2000. TCS: a computer program to estimate gene genealogies. Mol. Ecol. 9:16571659.
  • Cornuet, J. M., and G. Luikart. 1996. Description and power analysis of two tests for detecting recent population bottlenecks from allele frequency data. Genetics 144:20012014.
  • Cowie, R. H., and B. S. Holland. 2008. Molecular biogeography and diversification of the endemic terrestrial fauna of the Hawaiian Islands. Philos. Trans. R. Soc. B Biol. Sci. 363:33633376.
  • Drummond, A. J., and A. Rambaut. 2007. BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evol. Biol. 7:214.
  • Drummond, A. J., A. Rambaut, B. Shapiro, and O. G. Pybus. 2005. Bayesian coalescent inference of past population dynamics from molecular sequences. Mol. Biol. Evol. 22:11851192.
  • Earl, D. A. 2009. Structure Harvester v0.3., Available at http://users.soe.ucsc.edu/~dearl/software/structureHarvester/
  • El Mousadik, A., and R. J. Petit. 1996. High level of genetic differentiation for allelic richness among populations of the argan tree [Argania spinosa (L) Skeels] endemic to Morocco. Theor. Appl. Genet. 92:832839.
  • Excoffier, L., and H. E. L. Lischer. 2010. Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows. Mol. Ecol. Res. 10:564567.
  • Excoffier, L., and P. E. Smouse. 1994. Using allele frequencies and geographic subdivision to reconstruct gene trees within a species: molecular variance parsimony. Genetics 136:343359.
  • Excoffier, L., P. Smouse, and J. M. Quattro. 1992. Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics 131:479491.
  • Eytan, R. I., and M. E. Hellberg. 2010. Nuclear and mitochondrial sequence data reveal and conceal different demographic histories and population genetic processes in Caribbean reef fishes. Evolution 64:33803397.
  • Fisher, R. A. 1932. Statistical methods for research workers. Oliver & Boyd, Edinburgh .
  • Franks, D. W., and G. S. Oxford. 2009. The evolution of exuberant visible polymorphisms. Evolution 63:26972706.
  • Fu, Y. X. 1997. Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection. Genetics 147:915925.
  • Funk, V. A., and W. L. Wagner. 1995. Biogeographic patterns in the Hawaiian Islands. Pp. 379419 in W. L. Wagner and V. A. Funk, eds. Hawaiian biogeography: evolution on a hot spot Archipelago. Smithsonian Institution Press, Washington , DC
  • Gillespie, R. G., and G. S. Oxford. 1998. Selection on the color polymorphism in Hawaiian happy-face spiders: evidence from genetic structure and temporal fluctuations. Evolution 52:775783.
  • Gillespie, R. G., and B. E. Tabashnik. 1989. What makes a happy face? Determinants of colour pattern in the Hawaiian happy face spider Theridion grallator (Araneae, Theridiidae). Heredity 62:355363.
  • Givnish, T. J. 1997. Adaptive radiation and molecular systematic: issues and approaches. in T. J. Givnish and S. K. J., eds. Molecular evolution and adaptive radiation. Cambridge University Press, Cambridge, U.K .
  • Goudet, J. 1995. FSTAT v1.2., a computer program to calculate F-statistics. J. Hered. 86:485486.
  • Holland, B. S., and R. H. Cowie. 2007. A geographic mosaic of passive dispersal: population structure in the endemic Hawaiian amber snail Succinea caduca (Mighels, 1845). Mol. Ecol. 16:24222435.
  • Hubisz, M. J., D. Falush, M. Stephens, and J. K. Pritchard. 2009. Inferring weak population structure with the assistance of sample group information. Mol. Ecol. Res. 9:13221332.
  • Jakobsson, M., and N. A. Rosenberg. 2007. CLUMPP: a cluster matching and permutation program for dealing with label switching and multimodality in analysis of population structure. Bioinformatics 23:18011806.
  • Jordan, S., C. Simon, D., Foote, and R. A. Englund. 2005. Phylogeographic patterns of Hawaiian Megalagrion damselfies (Odonata: Coenagrionidae) correlate with Pleistocene island boundaries. Mol. Ecol. 14:34573470.
  • Kirby, G. C. 1975. Heterozygote frequencies in small subpopulations. Theor. Popul. Biol. 8:3148.
  • Larkin, M. A., G. Blackshields, N. P. Brown, R. Chenna, P. A. McGettigan, H. McWilliam, F. Valentin, I. M. Wallace, A. Wilm, R. Lopez, et al. 2007. Clustal W and Clustal X version 2.0. Bioinformatics 23:29472948.
  • Luikart, G., and J. M. Cornuet. 1998. Empirical evaluation of a test for identifying recently bottlenecked populations from allele frequency data. Conserv. Biol. 12:228237.
  • Maddison, W. P., and D. R. Maddison. 2009. MESQUITE: a modular system for evolutionary analysis. Version 2.72. Available at http://mesquiteproject.org.
  • Meiklejohn, C.D., K.L. Montooth, and D.M. Rand. 2007. Positive and negative selection on the mitochondrial genome. Trends Genet. 23:259263.
  • Nei, M. 1978. Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics 89:583590.
  • ——— 1987. Molecular evolutionary genetics. Columbia Univ. Press, New York .
  • Nevo, E., A. Beiles, D. Kaplan, E.M. Golenberg, L. Olsvig-Whittaker, and Z. Naveh. 1986. Natural selection of allozyme polymorphisms: a microsite test revealing ecological genetic differentiation in wild barley. Evolution 40:1320.
  • Nullett, D., C. H. Fletcher III, S. Hotchkiss, and J. O. Juvik. 1998. Paleoclimate and geography. Pp. 6466 in S. P. Juvik and J. O. Juvik, eds. Atlas of Hawaii. Univ. of Hawaii Press, Honolulu .
  • Oxford, G. S. 2009. An exuberant, undescribed colour polymorphism in Theridion californicum (Araneae, Theridiidae): implications for a theridiid pattern ground plan and the convergent evolution of visible morphs. Biol. J. Linn. Soc. 96:2334.
  • Oxford, G. S., and R. G. Gillespie. 1996a. Quantum shifts in the genetic control of a colour polymorphism in Theridion grallator (Araneae: Theridiidae), the Hawaiian happy-face spider. Heredity 76:249256.
  • ———. 1996b. The effects of genetic background on the island-specific control of a colour polymorphism in Theridion grallator (Araneae: Theridiidae), the Hawaiian happy-face spider. Heredity 76:257266.
  • ———. 1996c. Genetics of a colour polymorphism in Theridion grallator (Araneae: Theridiidae), the Hawaiian happy-face spider, from Greater Maui. Heredity 76:238248.
  • ———. 2001. Portraits of evolution: studies of coloration in Hawaiian spiders. BioScience 51:521528.
  • Piano, F., E. M. Craddock, and M. P. Kambysellis. 1997. Phylogeny of the island populations of the Hawaiian Drosophila grimshawi complex: evidence from combined data. Mol. Phylogenet. Evol. 7:173184
  • Piry, S., G. Luikart, and J. M. Cornuet. 1999. BOTTLENECK: a computer program for detecting recent reductions in the effective population size using allele frequency data. J. Hered. 90:502503.
  • Price, J. P., and D. L. Elliott-Fisk. 2004. Topographic history of the Maui Nui Complex, Hawai’i and its implications for biogeography. Pac. Sci. 58:2745.
  • Pritchard, J. K., M. Stephens, and P. Donnelly. 2000. Inference of population structure using multilocus genotype data. Genetics 155:945959.
  • R Development Core Team. 2008. R: a language and environment for statistical computing. R Foundation for Statistical Computing. Vienna , Austria. Available at: http://www.R-project.org.
  • Ramos-Onsins, S. E., and J. Rozas. 2002. Statistical properties of new neutrality tests against population growth. Mol. Biol. Evol. 19:20922100.
  • Rice, W. R. 1989. Analyzing tables of statistical tests. Evolution 43:223225.
  • Roderick, G. K., and R. G. Gillespie. 1998. Speciation and phylogeography of Hawaiian terrestrial arthropods. Mol. Ecol. 7:519531.
  • Rosenberg, N. A. 2004. DISTRUCT: a program for the graphical display of population structure. Mol. Ecol. Notes 4:137138.
  • Rundell, R. J., and T. D. Price. 2009. Adaptive radiation, nonadaptive radiation, ecological speciation and nonecological speciation. Trends Ecol. Evol. 24:394399.
  • Tajima, F. 1983. Evolutionary relationship of DNA sequences in finite populations. Genetics 105:437460.
  • ——— 1989. Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics 123:585595.
  • Uchikawa, J., B. N. Popp, J. E. Schoonmaker, A. Timmermann, and S. J. Lorenz. 2010. Geochemical and climate modeling evidence for Holocene aridification in Hawaii: dynamic response to a weakening equatorial cold tongue. Quat. Sci. Rev. 29:30573066.
  • Vandergast, A. G., R. G. Gillespie, and G. K. Roderick. 2004. Influence of volcanic activity on the population genetic structure of Hawaiian Tetragnatha spiders: fragmentation, rapid population growth and the potential for accelerated evolution. Mol. Ecol. 13:17291743.
  • Vanderwerf, E. A., L. C. Young, N. W. Yeung, and D. B. Carlon. 2010. Stepping stone speciation in Hawaii's flycatchers: molecular divergence supports new island endemics within the elepaio. Conserv. Genet. 11:12831298.
  • Wagner, W. L., and V. Funk, eds. 1995. Hawaiian biogeography: evolution on a hot spot Archipelago. Smithsonian Inst. Press, Washington , DC .
  • Wagner, W. L., D. R. Herbst, and S. H. Sohmer. 1999. Manual of the flowering plants of Hawaii. University of Hawaii Press, Honolulu .
  • Wright, S. 1951. The genetical structure of populations. Ann. Eugen. 15:323354.