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THE LANGUAGE OF SPECIATION
Article first published online: 28 SEP 2012
DOI: 10.1111/j.1558-5646.2012.01785.x
© 2012 The Author. Evolution© 2012 The Society for the Study of Evolution.
Additional Information
How to Cite
Harrison, R. G. (2012), THE LANGUAGE OF SPECIATION. Evolution, 66: 3643–3657. doi: 10.1111/j.1558-5646.2012.01785.x
Publication History
- Issue published online: 3 DEC 2012
- Article first published online: 28 SEP 2012
- Accepted manuscript online: 3 SEP 2012 11:55AM EST
- Received June 28, 2012, Accepted August 13, 2012
LITERATURE CITED
- , , , and 2010. Homoploid hybrid speciation in action. Taxon 59:1375–1386.
- 1949. Introgressive hybridization. Chapman & Hall, London .
- , and 1938. Hybridization in Tradescantia. III. The evidence for introgressive hybridization. Am. J. Bot. 25:396–402.
- , and 1954. Hybridization as an evolutionary stimulus. Evolution 8:378–388.
- , , and . 2008. Searching for candidate speciation genes using a proteomic approach: seminal proteins in field crickets. Proc. R. Soc. Lond. B 275:1975–1983.
- 2004. Transfer and origin of adaptations through natural hybridization: were Anderson and Stebbins right Plant Cell 16:562–570.
- 1997. Natural hybridization and evolution. Oxford Univ. Press, Oxford , UK .
- , , , , and 2006. Sympatric speciation in Nicaraguan crater lake cichlid fish. Nature 439:719–723.
- , and . 1981. Hybrid zones and speciation. Pp. 109–145 in W. R. Atchley and D. S. Woodruff, eds. Evolution and speciation. Cambridge Univ. Press, Cambridge , UK .
- , and . 1983. Mitochondrial DNA: new clues about evolution. Nature 306:317–318.
- 1969. Hypothetical mechanism of speciation. Evolution 23:685–687.
- , , , , , , and . 2002. Phylogenetic discordance at the species boundary: comparative gene genealogies among rapidly radiating Heliconius butterflies. Mol. Biol. Evol. 19:2176–2190.
- , , , , and 2011. The coupling hypothesis: why genome scans may fail to map local adaptation genes. Mol. Ecol. 20:2044–2072.
- 1957. Centrifugal speciation. Quart. Rev. Biol. 32:247–277.
- 2005. Recombination and speciation. Mol. Ecol. 14:2621–2635.
- , and 2001. Searching for speciation genes. Nature 412:31–32.
- , , and . 2008. Sympatric, parapatric or allopatric: the most important way to classify speciation Philos. Trans. R. Soc. B 363:2997–3007
- , and 2004. Genomic scan using AFLP markers as a means to assess the role of directional selection in the divergence of sympatric whitefish ecotypes. Mol. Biol. Evol. 21:945–956.
- 1975. The genetics of speciation at the diploid level. Am. Nat. 109:83–92.
- , , and . 1997. The effects of local selection, balanced polymorphism, and background selection on equilibrium patterns of genetic diversity in subdivided populations. Genet. Res. 70:155–174.
- 2011. Speciation in a small space. Proc. Natl. Acad. Sci. USA 108:12975–12976.
- , and . 2004. Speciation. Sinauer Associates, Sunderland , MA .
- , , and 2010. Sympatric speciation in a genus of marine fish. Mol. Ecol. 19:2089–2105.
- . 2007. Species concepts and species delimitation. Syst. Biol. 56:879–886.
- 1937a. Genetics and the origin of species. Columbia Univ. Press, New York .
- 1937b. Genetic nature of species differences. Am. Nat. 71:404–420.
- 1970. Genetics of the evolutionary process. Columbia Univ. Press, New York .
- , , , and 2005. Consequences of reproductive barriers for genealogical discordance in the European corn borer. Proc. Natl. Acad. Sci. 102:14706–14711.
- , , and 2010. Components of reproductive isolation between North American pheromone strains of the European corn borer. Evolution 64:881–902.
- , , and . 2004. Genomic evidence for divergence with gene flow in host races of the larch budmoth. Proc. R. Soc. Lond. B 271:97–105.
- 1977. Geographic variation, speciation, and clines. Princeton Univ. Press, Princeton , NJ .
- 1982. Problems in distinguishing historical from ecological factos in biogeography. Am. Zool. 22:441–452.
- , , , and . 2012. Establishment of new mutations under divergence and genome hitchhiking. Phil. Trans. R. Soc. B 367:461–474
- , , , , , and 1983. Flow of mitochondrial DNA across a species boundary. Proc. Natl. Acad. Sci. USA 80:2290–2294.
- , , and . 2008. What, if anything, is sympatric speciation J. Evol. Biol. 21:1452–1459.
- , , and . 2009. Pattern, process, and geographic modes of speciation. J. Evol. Biol. 22:2342–2347.
- , , , , and 2009. Sequential sympatric speciation across trophic levels. Science 323:776–779.
- , and 2007. Evolutionary analysis. 4th ed. Pearson/Prentice Hall, Upper Saddle River , NJ .
- 2009. Evolution. 2nd ed. Sinauer Associates, Sunderland , MA
- , , and 2010. An EST-based genome scan using 454 sequencing in the marine snail Littorina saxatilis. J. Evol. Biol. 23:2004–2016.
- . 2003. Models of speciation: what have we learned in 40 years Evolution 57:2197–2215.
- . 2004. Fitness landscapes and the origin of species. Princeton Univ. Press, Princeton , NJ .
- 2006. Speciation: selection against migrant pathogens: the immigrant inviability barrier in pathogens. Heredity 97:316–318.
- , , , , and 2006. Homoploid hybrid speciation in an extreme habitat. Science 314:1923–1925.
- , , and . 2006. Adaptation to a steep environmental gradient and an associated barrier to gene exchange in Littorina saxatilis. Evolution 60:268–278.
- 1981. Plant speciation. Columbia Univ. Press, New York .
- , and 2005. The ecological genetics of homoploid hybrid speciation. J. Hered. 96:241–252.
- 1986. Pattern and process in a narrow hybrid zone. Heredity 56:347–359.
- . 1990. Hybrid zones: windows on evolutionary process. Oxford Surv. Evol. Biol. 7:69–128.
- . 1993. Hybrid zones and the evolutionary process. Oxford Univ. Press, New York .
- . 1998. Linking evolutionary pattern and process: the relevance of species concepts for the study of speciation. Pp. 19–31 in D. J. Howard and S. H. Berlocher, eds. Endless forms: species and speciation. Oxford Univ. Press.
- . 2011. Understanding the origin of species: where have we been, where are we going? Pp. 119–149 in M. A. Bell, D. J. Futuyma, W. F. Eanes, and J. S. Levinton, eds. Evolution since Darwin: the first 150 years. Sinauer Associates, Sunderland , MA .
- , and . 1989. Mosaic hybrid zones and the nature of species boundaries. Pp. 111–133 in D. Otte and J. A. Endler, eds. Speciation and its consequences. Sinauer Associates, Sunderland , MA .
- , , and 1987. Mitochondrial DNA variation in field crickets across a narrow hybrid zone. Mol. Biol. Evol. 4:144–158.
- , and . 1998. Chromosomal heterozygosity and fertility in house mouse (Mus musculus domesticus) from northern Italy. Genetics 150:1143–1154.
- , , and 2008. Adaptive sympatric speciation of polychromatic “roundfin” sailfin silverside fish in Lake Matano (Sulawesi). Evolution 62:2178–2195.
- 2000. The genetic legacy of the Quartenary ice ages. Nature 405:907–913.
- 2001. Speciation, hybrid zones and phylogeography—or seeing genes in space and time. Mol. Ecol. 10:537–549.
- 2011. Quaternary phylogeography: the roots of hybrid zones. Genetica 139:617–638.
- 2010. Isolation with migration models for more than two populations. Mol. Biol. Evol. 27:905–20.
- , and . 2004. Multilocus methods for estimating population sizes, migration rates and divergence time, with applications to the divergence of Drosophila pseudoobscura and D. persimilis. Genetics 167:747–760.
- 1986. A zone of overlap and hybridization between two ground cricket species. Evolution 40:34–43.
- , , , and 2008. Hybrid trait speciation and Heliconius butterflies. Philos. Trans. R. Soc. Lond. B 363:3047–3054.
- 1968. The concept of stasipatric speciation. Syst. Zool. 17:14–22.
- , and 2006. Does niche conservatism promote speciation: a case study in North American salamanders. Evolution 60:2604–2621.
- , , and . 2009. The genomcis of speciation in Drosophila: diversity, divergence, and introgression estimated using low-coverage genome sequencing. PLoS Genet. 5:e1000550.
- , , , , and 2011. Gene genealogies reveal differentiation at sex pheromone olfactory receptor loci in pheromone strains of the European corn borer, Ostrinia nubilalis. Evolution 65:83–93.
- , , , , , , , , , , et al. 2010. Widespread divergence between incipient Anopheles gambiae species revealed by whole genome sequences. Science 330:512–514.
- , and . 2003. The causes of phylogenetic conflict in a classic Drosophila species group. Proc. Roy. Soc. Lond. B 270:1193–1202.
- , , , , , and 2011. Assessing multilocus introgression patterns: a case study on the mouse X chromosome in central Europe. Evolution 65:1428–1446.
- 2005. Hybridization as an invasion of the genome. Trends Ecol. Evol. 20:229–237.
- 2007. Hybrid speciation. Nature 446:279–283.
- , , , and . 2009. Space, sympatry, and speciation. J. Evol. Biol. 22:2332–2341.
- , , and 2009. Genome scan to assess the respective role of host-plant and environmental constraints on the adaptation of a widespread insect. BMC Evol. Biol. 9:288.
- , , and . 2009. Genealogical discordance and patterns of introgression and selection across a cricket hybrid zone. Evolution 63:2999–3015.
- , , , , and 2006. Speciation by hybridization in Heliconius butterflies. Nature 441:868–871.
- 1942. Systematics and the origin of species. Columbia Univ. Press, New York .
- . 1963. Animal species and evolution. Harvard Univ. Press, Cambridge , MA .
- 1982. The growth of biological thought. Belknap Press, Cambridge , MA .
- , , , , , and 2010. Widespread genomic divergence during sympatric speciation. Proc. Natl. Acad. Sci. USA 107:9724–9729.
- 1910. Hybridism. Encyclopedia Britannica. 11th ed. Cambridge Univ. Press, Cambridge , England .
- 1977. An evaluation of narrow hybrid zones in vertebrates. Q. Rev. Biol. 52:263–277.
- , and . 2003. Accumulating post-zygotic isolation genes in paraptry: a new twist on chromosomal speciation. Evolution 57:447–459.
- , , , , , , , , , , et al. 2010. SNP genotyping defines complex gene flow boundaries among African malaria vector mosquitoes. Science 330:514–517.
- , , and . 2009. Variable patterns of introgression in two sculpin hybrid zones suggest genomic isolation differs among populations. Mol. Ecol. 18:2615–2637.
- , and 2009. Understanding the onset of hybrid speciation. Trends Genet. 26:54–58.
- , and 2009. Islands of speciation or mirages in the desert? Examining the role of restricted recombination in maintaining species. Heredity 103:439–44.
- , and . 2006. Speciation genetics: evolving approaches. Nat. Rev. Genet. 7:851–861.
- , , , and . 2001. Chromosomal inversions and the reproductive isolation of species. Proc. Natl. Acad. Sci. USA 98:12084–12088.
- 2004. Reproductive isolation caused by visual predation against migrants between divergent environments. Proc. Royal Soc. B 271:1521–1528.
- , and 2012. Genomic divergence during speciation: causes and consequences. Phil. Trans. Roy. Soc. B 367:332–342.
- , and 2011. The genes underlying the process of speciation. Trends Ecol. Evol. 26:160–167.
- , , and 2005. Perspective: reproductive isolation caused by natural selection against immigrants from divergent habitats. Evolution 59:705–719.
- , , and 2008. Heterogeneous genomic differentiation between walking-stick ecotypes: “isolation by adaptation” and multiple roles for divergent selection. Evolution 62:316–336.
- , , and . 2009. Divergent selection and heterogeneous genomic divergence. Mol. Ecol. 18:375–402.
- , and 2010. Differential introgression causes genealogical discordance in host races of Acrocercops transecta (Insecta: Lepidoptera). Mol. Ecol. 19:2106–2119.
- , , and 2004. Speciation genes. Curr. Opin. Genet. Dev. 14:675–679.
- 1985. The recognition concept of species. Pp. 21–29 in E. S. Vrba, ed. Species and speciation. Transvaal Museum, Pretoria .
- 1985. Adaptive radiation on an isolated oceanic island: the Cryptorhynchinae (Curculionidae) of Rapa revisited. Bio.l J. Linn. Soc. 26:95–187.
- 2010. Using differential intorgression in a hybrid zone to identify genomic regions involved in speciation. Mol. Ecol. Res. 10:806–820.
- , and 2005. The genomics of speciation: investigating the molecular correlates of X chromosome introgression across the hybrid zone between Mus domesticus and Mus musculus. Biol. J. Linn. Soc. 84:523–534.
- , , and 2004. Differential patterns of introgression across the X chromosome in a hybrid zone between two species of house mice. Evolution 58:2064–2078.
- , , , and . 2009. A continuum of genetic divergence from sympatric host races to species in the pea aphid complex. Proc. Natl. Acad. Sci. USA 106:7495–7500.
- 1983. Interspecific cytoplasmic gene flow in the absence of nuclear gene flow: evidence from Drosophila. Proc. Natl. Acad. Sci. USA 80:492–495.
- , , and . 2007. Dicordant divergence times among Z-chromosome regions between two ecologically distinct swallowtail butterfly species. Evolution 61:912–927.
- , , and 200. Components of reproductive isolation between the monkeyflowers Mimulus lewisii and M. cardinalis (Phrymaceae). Evolution 57:1520–1534.
- , , , , and 2011. SNP signatures of selection on standing genetic variation and their association with adaptive phenotypes along gradients of ecological speciation in whitefish species pairs. Mol. Ecol. 20:545–559.
- , and 1993. Laboratory experiments on speciation: what have we learned in forty years Evolution 47:1637–1653.
- 2001. Chromosomal rearrangements and speciation. Trends Ecol. Evol. 16:351–358.
- , and . 1991. Phylogenetic consequences of cytoplasmic gene flow in plants. Evol. Trends Plants 5:65–84.
- , and . 1993. Hybrid speciation accompanied by genomic reorganization in wild sunflowers. Nature 375:313–316.
- , , and . 1999. Hybrid zones and the genetic architecture of a barrier to gene flow between two sunflower species. Genetics 152:713–727.
- , , , , , , , , , and 2003. Major ecological transitions in wild sunflowers facilitated by hybridization. Science 301:1211–1216.
- , and . 2005. Ecological speciation. Ecol. Lett. 8:336–352.
- , and 2001. A genetic interpretation of ecologically dependent isolation. Evolution 55:198–201.
- , , , , , , , and 2010. Genetic evidence for hybrid trait speciation in Heliconius butterflies. PLoS Genet. 6:1–12.
- , , , , , , , , , and 2006. Sympatric speciation in palms on an oceanic island. Nature 441:210–213.
- 2000. The ecology of adaptive radiation. Oxford Univ. Press, Oxford , UK .
- . 2001. Ecology and the origin of species. Trends Ecol. Evol. 16:372–380.
- . 2009. Evidence for ecological speciation and its alternative. Science 323:737–741.
- , , , and 2005. Host shift to an invasive plant triggers rapid hybrid speciation. Nature 436:546–549.
- 2002. Conflict between mitochondrial and nuclear DNA phylogenies of a recent species radiation: what mitochondrial DNA reveals and conceals about modes of speciation in Hawaiian crickets. Proc. Natl. Acad. of Sci. USA 99:16122–16127.
- , and 2011. Genes versus phenotypes in the study of speciation. Genetica 139:649–661.
- , , and . 2008. Hitching a lift on the road to speciation. Mol. Ecol. 17:4177–4180.
- , , , and 2010. The biology of speciation. Evolution 64:295–315.
- 1965. More evolutionary terms. Syst. Zool. 14:57–58.
- 1959. The role of hybridization in evolution. Proc. Amer. Phil. Soc. 103:231–251.
- , , , , , , , , , and . 2008. Genome-wide patterns of gene flow across a house mouse hybrid zone. Genome Res. 18:67.
- , , , , and 2010. The variable geneomic architecture of isolation between hybridizing species of house mouse. Evolution 64:472–485.
- , , and 2000. The phylogeny of closely related species as revealed by the genealogy of a speciation gene, Odysseus. Proc. Natl. Acad. Sci. USA 97:5313–5316.
- , , and 2003. A model for chloroplast capture. Evolution 57:1776–1782.
- , and 2010. Genomic islands of speciation or genomic islands and speciation?Mol. Ecol. 19:848–850.
- , , and . 2005. Genomic islands of speciation in Anopheles gambiae. PLoS Biol. 3:1572–1578.
- 1999. Reproductive isolation between sympatric races of pea aphids. I. Gene flow restriction and habitat choice. Evolution 53:1446–1457.
- . 2001. Sympatric speciation in animals: the ugly duckling grows up. Trends. Ecol. Evol. 16:381–390.
- . 2009. Natural selection in action during speciation. Proc. Natl. Acad. Sci. USA 106:9939–9946.
- , and 2008. The genetic mosaic suggests a new role for hitchhiking in ecological speciation. Mol. Ecol. 17:4334–4345.
- 2008. Coalescent theory: an introduction. Roberts & Company Publishers, Greenwood Village , CO .
- . 2010. Natural selection and coalescent theory. Pp. 119–149 in M. A. Bell, D. J. Futuyma, W. F. Eanes, and J. S. Levinton, eds. Evolution since Darwin: the first 150 years. Sinauer and Associates, Sunderland , MA .
- , and 1997. Estimating ancestral population parameters. Genetics 145:847–855.
- , , , , , , , , , , et al. 2007. Mosaic genome architecture of the Anopheles gambiae species complex. PLoS ONE: 2:e1249.
- , , , , and . 2010. Genetic association of physically unlinked islands of genomic divergence in incipient species of Anopheles gambiae. Mol. Ecol. 19:925–939.
- , , , , and 2009. Fine-scale phylogenetic discordance across the house mouse genome. PLoS Genet. 5:e1000729.
- 1969. Chromosomal rearrangements and speciation in animals. Annu. Rev. Genetics 3:75–98.
- . 1978. Modes of speciation. W. H. Freeman and Company, San Francisco , CA .
- , , , , and . 2008. Sequence differentiation in regions identified by a genome scan for local adaptation. Mol. Ecol. 17:3123–3135.
- 2001. The genic view of the process of speciation. J. Evol. Biol. 14:851–86.

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