EVIDENCE FOR SELECTION ON A CHORDATE HISTOCOMPATIBILITY LOCUS
Article first published online: 10 OCT 2012
© 2012 The Author(s). Evolution© 2012 The Society for the Study of Evolution.
Volume 67, Issue 2, pages 487–500, February 2013
How to Cite
Nydam, M. L., Taylor, A. A. and De Tomaso, A. W. (2013), EVIDENCE FOR SELECTION ON A CHORDATE HISTOCOMPATIBILITY LOCUS. Evolution, 67: 487–500. doi: 10.1111/j.1558-5646.2012.01787.x
- Issue published online: 28 JAN 2013
- Article first published online: 10 OCT 2012
- Accepted manuscript online: 3 SEP 2012 11:57AM EST
- Received June 7, 2011 Accepted July 31, 2012
Figure S1. Amino acid diversity in FuHC as calculated by the program DIVAA (Rodi et al. 2004) for (a) Exons 1--14 and (b) Exons 18--29/31.
Figure S2. Recombination (ρ) across (a) Exons 1--14 and (b) Exons 18--29/31 of FuHC for the Monterey, CA, population.
Figure S3. Values of the selection statistic from omegaMap 0.5 across (a) Exons 1--14 and (b) Exons 18--29/31 of FuHC for the Monterey, CA, population.
Figure S4. Distribution across FuHC (a) Exons 1--14 and (b) Exons 18--29/31 of the 24 codons that have > 95% probability of the selection statistic > 1 and are present in at least three of the six populations.
Table S1. Summary statistics for FuHC and 12 housekeeping genes.
Table S2. Values of Tajima's D statistics and associated 95% confidence intervals for all housekeeping genes, asterisks denote statistical significance at α = 0.05.
Table S3. AMOVA, fixation indices, and pairwise FST values for all housekeeping genes.
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