Table S1. Accessions of the sequences selected for the phylogeny.

Table S2. Primers used in this study.

Table S3. Summary of the predicted putative transcription factor binding sites (TFBS) in the zebrafish hif alpha promoters (-500 bp from TSS) that have conserved presence in the hif alpha promoters (-500 bp from TSS) of three other fully sequenced teleost species.

Table S4. The predicted putative paralog-specific transcription factor binding sites (TFBS) and hypoxia response elements (HREs) in HIF promoters.

Table S5. Synteny analysis and the flanking genes of vertebrate HIF alphas using data from Ensembl.

Table S6. Zebrafish HIF alpha homologs with references to available studies in zebrafish and other cyprinids.

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