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References

  • [1]
    Yayanos, A.A (1995) Microbiology to 10 500 meters in the deep sea. Annu. Rev. Microbiol. 49, 777805.
  • [2]
    Yayanos, A.A, Dietz, A.S, Van Boxtel, R (1979) Isolation of a deep-sea barophilic bacterium and some of its growth characteristics. Science 205, 808810.
  • [3]
    Kato, C, Sato, T, Horikoshi, K (1995) Isolation and properties of barophilic and barotolerant bacteria from deep-sea mud samples. Biodivers. Conserv. 4, 19.
  • [4]
    Kato, C, Masui, N, Horikoshi, K (1996) Properties of obligately barophilic bacteria isolated from a sample of deep-sea sediment from the Izu-Bonin trench. J. Mar. Biotechnol. 4, 9699.
  • [5]
    Kato, C, Li, L, Nogi, Y, Nakamura, Y, Tamaoka, J, Horikoshi, K (1998) Extremely barophilic bacteria isolated from the Mariana Trench, Challenger Deep, at a depth of 11 000 meters. Appl. Environ. Microbiol. 64, 15101513.
  • [6]
    DeLong, E.F, Franks, D.G, Yayanos, A.A (1997) Evolutionary relationships of cultivated psychrophilic and barophilic deep-sea bacteria. Appl. Environ. Microbiol. 63, 21052108.
  • [7]
    Nogi, Y, Masui, N, Kato, C (1998) Photobacterium profundum sp. nov., a new, moderately barophilic bacterial species isolated from a deep-sea sediment. Extremophiles 2, 17.
  • [8]
    Li, L, Kato, C, Nogi, Y, Horikoshi, K (1998) Distribution of the pressure-regulated operons in deep-sea bacteria. FEMS Microbiol. Lett. 159, 159166.
  • [9]
    Deming, J.W, Hada, H, Colwell, R.R, Luehrsen, K.R, Fox, G.E (1984) The nucleotide sequence of 5S rRNA from two strains of deep-sea barophilic bacteria. J. Gen. Microbiol. 130, 19111920.
  • [10]
    MacDonell, M.T, Colwell, R.R (1985) Phylogeny of the Vibrionaceae, and recommendation for two new genera, Listonella and Shewanella. Syst. Appl. Microbiol. 6, 171182.
  • [11]
    Nogi, Y, Kato, C, Horikoshi, K (1998) Taxonomic studies of deep-sea barophilic Shewanella species, and Shewanella violacea sp. nov., a new barophilic bacterial species. Arch. Microbiol. 170, 331338.
  • [12]
    Deming, J.W, Somers, L.K, Straube, W.L, Swartz, D.G, MacDonell, M.T (1988) Isolation of an obligately barophilic bacterium and description of a new genus, Colwellia gen. nov.. Syst. Appl. Microbiol. 10, 152160.
  • [13]
    Nogi, Y, Kato, C, Horikoshi, K (1998) Moritella japonica sp. nov., a novel barophilic bacterium isolated from a Japan Trench sediment. J. Gen. Appl. Microbiol. 44, 289295.
  • [14]
    Nogi, Y, Kato, C (1999) Taxonomic studies of extremely barophilic bacteria isolated from the Mariana Trench, and Moritella yayanosii sp. nov., a new barophilic bacterial species. Extremophiles 3, 7177.
  • [15]
    Venkateswaran, K, Moser, D.P, Dollhopf, M.E, Lies, D.P, Saffarini, D.A, MacGregor, B.J, Ringelberg, D.B, White, D.C, Nishijima, M, Sano, H, Burghardt, J, Stackebrandt, E, Nealson, K.H (1999) Polyphasic taxonomy of the genus Shewanella and description of Shewanella oneidensis sp. nov.. Int. J. Syst. Bacteriol. 49, 705724.
  • [16]
    Li, L, Kato, C, Horikoshi, K (1999) Bacterial diversity in deep-sea sediments from different depths. Biodivers. Conserv. 8, 659677.
  • [17]
    DeLong, E.F, Yayanos, A.A (1986) Biochemical function and ecological significance of novel bacterial lipids in deep-sea procaryotes. Appl. Environ. Microbiol. 51, 730737.
  • [18]
    Wirsen, C.O, Jannasch, H.W, Wakeham, S.G, Canuel, E.A (1987) Membrane lipids of a psychrophilic and barophilic deep-sea bacterium. Curr. Microbiol. 14, 319322.
  • [19]
    Li, L, Kato, C, Horikoshi, K (1999) Microbial diversity in sediments collected from the deepest cold-seep area, the Japan Trench at a depth of 6400 m. Mar. Biotechnol. 1, 391400.
  • [20]
    Distel, D.L, Lane, D.J, Olsen, G.J, Givoannoni, S.J, Pace, B, Pace, N.R, Stahl, D.A, Felbeck, H (1988) Sulfur-oxidizing bacterial endosymbionts: analysis of phylogeny and specificity by 16S rRNA sequences. J. Bacteriol. 170, 25062510.
  • [21]
    Kato, C, Ikegami, A, Smorawinska, M, Usami, R, Horikoshi, K (1997) Structures of genes in a pressure-regulated operon and adjacent regions from a barotolerant bacterium strain DSS12. J. Mar. Biotechnol. 5, 210218.
  • [22]
    Kato, C, Smorawinska, M, Li, L, Horikoshi, K (1997) Comparison of the gene expression of aspartate β-D-semialdehyde dehydrogenase at elevated hydrostatic pressure in deep-sea bacteria. J. Biochem. 121, 717723.
  • [23]
    Kato, C, Tamegai, H, Ikegami, A, Usami, R, Horikoshi, K (1996) Open reading frame 3 of the barotolerant bacterium strain DSS12 is complementary with cydD in Escherichia coli: cydD functions are required for cell stability at high pressure. J. Biochem. 120, 301305.
  • [24]
    Tamegai, H, Kato, C, Horikoshi, K (1998) Pressure-regulated respiratory system in barotolerant bacterium, Shewanella sp. strain DSS12. J. Biochem. Mol. Biol. Biophys. 1, 213220.
  • [25]
    Nakasone, K, Ikegami, A, Kato, C, Usami, R, Horikoshi, K (1999) Analysis of cis-elements upstream of the pressure-regulated operon in the deep-sea barophilic bacterium Shewanella violacea strain DSS12. FEMS Microbiol. Lett. 176, 351356.
  • [26]
    Kato, C, Qureshi, M.H (1999) Pressure response in deep-sea piezophilic bacteria. J. Mol. Microbiol. Biotechnol. 1, 8792.
  • [27]
    Simidu, U, Kita-Tsukamoto, K, Yamasato, T, Yotsu, M (1990) Taxonomy of four marine bacterial strains that produce tetrodotoxin. Int. J. Syst. Bacteriol. 40, 331336.
  • [28]
    Venkateswaran, K, Dollhopf, M.E, Aller, R, Stackebrandt, E, Nealson, K.H (1998) Shewanella amazonensis sp. nov., a novel metal-reducing facultative anaerobe from Amazonian shelf muds. Int. J. Syst. Bacteriol. 48, 965972.
  • [29]
    Ziemke, F, Holfe, M.G, Lalucat, J, Rossello-Mora, R (1998) Reclassification of Shewanella putrefaciens Owen's genomic group II as Shewanella baltica sp. nov.. Int. J. Syst. Bacteriol. 48, 179186.
  • [30]
    J.P BowmamS.A McCammonD.S NicholsJ.H SkerrattS.M ReaP.D NicholsT.A McMeekin Shewanella gelidimarina sp. nov. and Shewanella frigidimarina sp. nov., novel Antarctic species with the ability to produce eicosapentaenoic acid (20ω3) and grow anaerobically by dissimilatory Fe(III) reduction, Int. J. Syst. Bacteriol., 47, 5 1997 10401047.
  • [31]
    Jensen, M.J, Tebo, B.M, Baumann, P, Mandel, M, Nealson, K.H (1980) Characterization of Alteromonas hanedai (sp. nov.), a non-fermentative luminous species of marine origin. Curr. Microbiol. 3, 311315.
  • [32]
    Leonardo, M.R, Moser, D.P, Barbieri, E, Brantner, C.A, MacGregor, B.J, Paster, B.J, Stackebrandt, E, Nealson, K.H (1999) Shewanella pealeana sp. nov., a member of the microbial community associated with the accessory nidamental gland of the squid Loligo pealei. Int. J. Syst. Bacteriol. 49, 13411351.
  • [33]
    Owen, R, Legros, R.M, Lapage, S.P (1978) Base composition, size and sequence similarities of genome deoxyribonucleic acids from clinical isolates of Pseudomonas putrefaciens. J. Gen. Microbiol. 104, 127138.
  • [34]
    Makemson, J.C, Fulayfil, N.R, Landry, W, Van Ert, L.M, Wimpee, C.F, Widder, E.A, Case, J.F (1997) Shewanella woodyi sp. nov., an exclusively respiratory luminous bacterium isolated from the Alboran Sea. Int. J. Syst. Bacteriol. 47, 10341039.
  • [35]
    Morita, R.Y (1975) Psychrophilic bacteria. Bacteriol. Rev. 39, 144167.
  • [36]
    Nogi, Y, Kato, C, Horikoshi, K (2000) Isolation and taxonomy of deep-sea barophilic (piezophilic) microorganisms. Recent Res. Dev. Microbiol. 4, 101112.
  • [37]
    Hazel, J.R, Williams, E.E (1990) The role of alterations in membrane lipid composition in enabling physiological adaptation of organisms to their physical environment. Prog. Lipid Res. 29, 167227.
  • [38]
    Macdonald, A.G. (1987) The role of membrane fluidity in complex processes under high pressure. In: Current Perspectives in High Pressure Biology (Marquis, R.E., Zimmerman, A.M., Jannasch, H.W., Eds.), pp. 207–223. Academic Press, London.
  • [39]
    Allen, E.E, Facciotti, D, Bartlett, D.H (1999) Monounsaturated but not polyunsaturated fatty acids are required for growth of the deep-sea bacterium Photobacterium profundum strain SS9 at low temperature and high pressure. Appl. Environ. Microbiol. 65, 17101720.
  • [40]
    DeLong, E.F, Yayanos, A.A (1985) Adaptation of the membrane lipids of a deep-sea bacterium to change in hydrostatic pressure. Science 228, 11011103.
  • [41]
    Nichols, D.S, Nichols, P.D, Russell, N.J, Davis, N.W, McMeekin, T.A (1997) Polyumsaturated fatty acids in the psychrophilic bacterium Shewanella gelidimarina ACAM456T: molecular species analysis of major phospholipids and biosynthesis of eicosapentaenoic acid. Biochim. Biophys. Acta 1347, 164176.
  • [42]
    W.J Schmitz Jr. (1995) On the interbasin-scale thermohaline circulation. Rev. Geophys. 33, 151173.
  • [43]
    Maruyama, A, Honda, D, Yamamoto, H, Kitamura, K, Higashihara, T (2000) Phylogenetic analysis of psychrophilic bacteria isolated from the Japan Trench, including a description of the deep-sea species Psychrobacter pacificensis sp. nov.. Int. J. Syst. Evol. Microbiol. 50, 835846.