SEARCH

SEARCH BY CITATION

References

  • Aihara J (1992) Why aromatic compounds are stable. Sci Am 266: 6268.
  • Assih EA, Ouattara AS, Thierry S, Cayol JL, Labat M & Macarie H (2002) Stenotrophomonas acidaminiphila sp nov., a strictly aerobic bacterium isolated from an upflow anaerobic sludge blanket (UASB) reactor. Int J Syst Evol Microbiol 52: 559568.
  • Baek SH, Kim KH, Yin CR, Jeon CO, Im WT, Kim KK & Lee ST (2003) Isolation and characterization of bacteria capable of degrading phenol and reducing nitrate under low-oxygen conditions. Curr Microbiol 47: 462466.
  • Burland SM & Edwards EA (1999) Anaerobic benzene biodegradation linked to nitrate reduction. Appl Environ Microbiol 65: 529533.
  • Butler CS & Mason JR (1997) Structure-function analysis of the bacterial aromatic ring-hydroxylating dioxygenases. Adv Microbial Physiol 38: 4784.
  • Chakraborty R & Coates JD (2005) Hydroxylation and carboxylation–two crucial steps of anaerobic benzene degradation by Dechloromonas strain RCB. Appl Environ Microbiol 71: 54275432.
  • Chakraborty R, O'Connor SM, Chan E & Coates JD (2005) Anaerobic degradation of benzene, toluene, ethylbenzene and xylene by Dechloromonas strain RCB. Appl Environ Microbiol 71: 86498655.
  • Chang W, Um YS & Pulliam Holoman TR (2005) Molecular characterization of anaerobic microbial communitities from benzene-degrading sediments under methanogenic conditions. Biotechnol Prog 21: 17891794.
  • Coates JD, Bruce RA & Haddock JD (1998) Anoxic bioremediation of hydrocarbons. Nature 396: 730.
  • Coates JD, Bruce RA, Patrik J & Achenbach LA (1999) Hydrocarbon bioremediative potential of perchlorate-reducing bacteria. Bioremed Jl 3: 323334.
  • Coates JD, Chakraborty R & McInerney MJ (2002) Anaerobic benzene biodegradation–a new era. Res Microbiol 153: 621628.
  • Costa C, Dijkema C, Friedrich M, Garcia-Encina P, Fernandez-Polanco F & Stams AJM (2000) Denitrification with methane as electron donor in oxygen-limited bioreactors. Appl Microbiol Biotechnol 53: 754762.
  • Fahy A, McGenity TJ, Timmis KN & Ball AS (2006) Heterogeneous aerobic benzene-degrading communities in oxygen-depleted groundwaters. FEMS Microbiol Ecol 58: 260270.
  • Grbic-Galic D (1986) Anaerobic production and transformation of aromatic-hydrocarbons and substituted phenols by ferulic acid degrading BESA-inhibited methanogenic consortia. FEMS Microbiol Ecol 38: 161169.
  • Heilig H, Zoetendal EG, Vaughan EE, Marteau P, Akkermans ADL & De Vos WM (2002) Molecular diversity of Lactobacillus spp. and other lactic acid bacteria in the human intestine as determined by specific amplification of 16S ribosomal DNA. Appl Environ Microbiol 68: 114123.
  • Holliger C, Schraa G, Stams AJM & Zehnder AJB (1993) A highly purified enrichment culture couples the reductive dechlorination of tetrachloroethene to growth. Appl Environ Microbiol 59: 29912997.
  • Huber T, Faulkner G & Hugenholtz P (2004) Bellerophon: a program to detect chimeric sequences in multiple sequence alignments. Bioinformatics 20: 23172319.
  • Kasai Y, Takahata Y, Manefield M & Watanabe K (2006) RNA-Based stable isotope probing and isolation of anaerobic benzene-degrading bacteria from gasoline-contaminated groundwater. Appl Environ Microbiol 72: 35863592.
  • Lane DJ (1991) 16S/23S rRNA Sequencing. Wiley, Chichester.
  • Logan BE (1998) A review of chlorate- and perchlorate-respiring microorganisms. Bioremed J 2: 6979.
  • Logan BE & Wu J (2002) Enhanced toluene degradation under chlorate conditions by bioaugmentation of sand columns with chlorate- and toluene-degrading enrichments. Bioremed J 6: 8795.
  • McCarty PL (1971) Energetics and bacterial growth. Organic Compounds in Aquatic Environments (FaustSD & HunterJV, eds), pp. 495531. Marcel Dekker, New York.
  • Mechichi T, Stackebrandt E & Fuchs G (2003) Alicycliphilus denitrificans gen. nov., sp. nov., a cyclohexanol-degrading, nitrate-reducing beta-proteobacterium. Int J Syst Evol Microbiol 53: 147152.
  • Muyzer G, Dewaal EC & Uitterlinden AG (1993) Profiling of complex microbial-populations by denaturing gradient gel-electrophoresis analysis of polymerase chain reaction-amplified genes-coding for 16S ribosomal-RNA. Appl Environ Microbiol 59: 695700.
  • Nicholson CA & Fathepure BZ (2005) Aerobic biodegradation of benzene and toluene under hypersaline conditions at the Great Salt Plains, Oklahoma. FEMS Microbiol Lett 245: 257262.
  • Nubel U, Engelen B, Felske A, Snaidr J, Wieshuber A, Amann RI, Ludwig W & Backhaus H (1996) Sequence heterogeneities of genes encoding 16S rRNAs in Paenibacillus polymyxa detected by temperature gradient gel electrophoresis. J Bacteriol 178: 56365643.
  • Phelps CD, Kerkhof LJ & Young LY (1998) Molecular characterization of a sulfate-reducing consortium which mineralizes benzene. FEMS Microbiol Ecol 27: 269279.
  • Probian C, Wulfing A & Harder J (2003) Anaerobic mineralization of quaternary carbon atoms: isolation of denitrifying bacteria on pivalic acid (2,2-dimethylpropionic acid). Appl Environ Microbiol 69: 18661870.
  • Reardon KF, Mosteller DC & Rogers JDB (2000) Biodegradation kinetics of benzene, toluene, and phenol as single and mixed substrates for Pseudomonas putida F1. Biotechnol Bioeng 69: 385400.
  • Rikken GB, Kroon AGM & Van Ginkel CG (1996) Transformation of (per)chlorate into chloride by a newly isolated bacterium: reduction and dismutation. Appl Microbiol Biotechnol 45: 420426.
  • Rittmann BE & McCarty PL (2001) Environmental Biotechnology: Principles and Applications. McGraw-Hill Book Company, New York.
  • Rooney-Varga JN, Anderson RT, Fraga JL, Ringelberg D & Lovley DR (1999) Microbial communities associated with anaerobic benzene degradation in a petroleum-contaminated aquifer. Appl Environ Microbiol 65: 30563063.
  • Stumm W & Morgan JJ (1981) Aquatic Chemistry: An Introduction Emphasizing Chemical Equilibria in Natural Waters. John Wiley & Sons.
  • Tan NCG, Van Doesburg W, Langenhoff AAM & Stams AJM (2006) Benzene degradation coupled with chlorate reduction in a soil column study. Biodegradation 17: 1117.
  • Thauer RK, Jungermann K & Decker K (1977) Energy conservation in chemotrophic anaerobic bacteria. Bacteriol Rev 41: 100180.
  • Ulrich AC & Edwards EA (2003) Physiological and molecular characterization of anaerobic benzene-degrading mixed cultures. Environ Microbiol 5: 92102.
  • Ulrich AC, Beller HR & Edwards EA (2005) Metabolites detected during biodegradation of 13C6-benzene in nitrate-reducing and methanogenic enrichment cultures. Environ Sci Technol 39: 66816691.
  • Van Doesburg W, Van Eekert MHA, Middeldorp PJM, Balk M, Schraa G & Stams AJM (2005) Reductive dechlorination of beta-hexachlorocyclohexane (beta-HCH) by a Dehalobacter species in coculture with a Sedimentibacter sp. FEMS Microbiol Ecol 54: 8795.
  • Van Ginkel CG, Rikken GB, Kroon AGM & Kengen SWM (1996) Purification and characterization of chlorite dismutase: a novel oxygen-generating enzyme. Arch Microbiol 166: 321326.
  • Willems A, Goor M, Thielemans S, Gillis M, Kersters K & Deley J (1992) Transfer of several phytopathogenic Pseudomonas species to Acidovorax as Acidovorax avenae subsp. avenae subsp. nov., comb. nov., Acidovorax avenae subsp citrulli, Acidovorax avenae subsp cattleyae, and Acidovorax konjaci. Int J Syst Bacteriol 42: 107119.
  • Wolterink AFWM, Jonker AB, Kengen SWM & Stams AJM (2002) Pseudomonas chloritidismutans sp. nov., a non-denitrifying, chlorate-reducing bacterium. Int J Syst Evol Microbiol 52: 21832190.
  • Yerushalmi L, Lascourreges JF, Rhofir C & Guiot SR (2001) Detection of intermediate metabolites of benzene biodegradation under microaerophilic conditions. Biodegradation 12: 379391.