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References

  • Acuna V, Giorgi A, Munoz I, Uelingher U & Sabater S (2004) Flow extremes and benthic organic matter shape the metabolism of a headwater Mediterranean stream. Freshwater Biol 49: 960971.
  • AFNOR (1982) Essais des Eaux: Norme Française. NFT 90-023, AFNOR.
  • Amann RI, Ludwig W & Schleifer K-H (1995) Phylogenetic identification and in situ detection of individual microbial cells without cultivation. Microbiol Rev 59: 143169.
  • Battin TJ, Kaplan LA, Newbold DJ, Cheng X & Hansen C (2003) Effects of current velocity on the nascent architecture of stream microbial biofilms. Appl Environ Microb 69: 54435452.
  • Bérard A & Benninghoff C (2001) Pollution-induced community tolerance (PICT) and seasonal variations in the sensitivity of phytoplankton to atrazine in microcosms. Chemosphere 45: 427437.
  • Bérard A, Leboulanger C & Pelte T (1999) Tolerance of Oscillatoria limnetica Lemmermann to atrazine in natural phytoplankton populations and in pure culture: influence of season and temperature. Arch Environ Con Tox 37: 472479.
  • Biggs BJF (1996) Patterns in benthic algae of streams. Algal Ecology (StevensonRJ, BothwellML & LoweRL, eds), pp. 3156. Academic Press, San Diego.
  • Biggs BJF & Thomsen HA (1995) Disturbance of stream periphyton by perturbations in shear-stress – time to structural failure and differences in community resistance. J Phycol 31: 233241.
  • Biggs BJF, Goring DG & Nikora VI (1998) Subsidy and stress responses of stream periphyton to gradients in water velocity as a function of community growthform. J Phycol 34: 598560.
  • Blanck H, Wänkberg S-Å & Molander S (1988) Pollution-induced community tolerance – a new ecotoxicological tool. Functional Testing of Aquatic Biota for Estimating Hazards of Chemicals, Vol. 988 (CairsJrJ & PrattJR, eds), pp. 219230. ASTM STP, Philadelphia.
  • Bonin DJ & Travers M (1992) Examen critique des méthodes d'estimation de la biomasse et de l'activité des microorganismes dans les systèmes aquatiques. Mar Life 2: 129.
  • Cattaneo A, Kerimian T, Roberge M & Marty J (1997) Periphyton distribution and abundance on substrata of different size along a gradient of steam trophy. Hydrobiology 354: 101110.
  • Dodds WK, Hutson RE, Eichem AC, Evans MA, Gudder DA, Fritz KM & Gray L (1996) The relationship of floods, drying, flow and light to primary production and producer biomass in a prairie stream. Hydrobiology 333: 151159.
  • Dorigo U & Leboulanger C (2001) A PAM fluorescence-based method for assessing the effects of photosystem II herbicides on freshwater periphyton. J Appl Phycol 13: 509515.
  • Dorigo U, Bérard A & Humbert J-F (2002) Comparison of eukaryotic phytobenthic community composition in a polluted river by partial 18S rRNA gene cloning and sequencing. Microb Ecol 4: 372380.
  • Dorigo U, Bourrain X, Bérard A & Leboulanger C (2003) Seasonal changes in river microalgae sensitivity to atrazine and isoproturon, along a contamination gradient. Sci Total Environ 318: 101114.
  • Dorigo U, Fontvieille D & Humbert J-F (2006) Spatial variability in the abundance and composition of the free-living bacterioplankton community in the pelagic zone of Lake Bourget (France). FEMS Microbiol Ecol 58: 109119.
  • Dorigo U, Leboulanger C, Bérard A, Bouchez A, Humbert J-F & Montuelle B (2007) Lotic biofilm community structure and pesticide tolerance along a contamination gradient in a vineyard area. Aquat Microb Ecol 50: 91102.
  • Excoffier L, Laval G & Schneider S (2005) Arlequin ver. 3.0: an integrated software package for population genetics data analysis. Evol Bioinformatics Online 1: 750.
  • Francoeur SN & Biggs BJF (2006) Short-term effects of elevated velocity and sediment abrasion on benthic algal communities. Hydrobiology 561: 5969.
  • Gouy V & Nivon C (2006) Protection des eaux en Beaujolais viticole: caractérisation et suivi de la qualité des eaux sur le bassin versant de la Morcille sur la période 2001–2005. Rapport final d'étude, Cemagref, Lyon.
  • Guasch H & Sabater S (1995) Seasonal-variations in photosynthesis-irradiance responses by biofilms in mediterranean streams. J Phycol 31: 727735.
  • Guasch H & Sabater S (1998) Light history influences the sensitivity to atrazine in periphytic algae. J Phycol 34: 233241.
  • Guasch H, Ivorra N, Lehmann V, Paulsson M, Real M & Sabater S (1998) Community composition and sensitivity of periphyton to atrazine in flowing waters: the role of environmental factors. J Appl Phycol 10: 203213.
  • Guasch H, Paulsson M & Sabater S (2002) Effect of copper on algal communities from oligotrophic calcalreous streams. J Phycol 38: 241248.
  • Guasch H, Navarro E, Serra A & Sabater S (2004) Phosphate limitation influences the sensitivity to copper in periphytic algae. Freshwater Biol 49: 463473.
  • Jackson CR, Churchill PF & Roden EE (2001) Successional changes in bacterial assemblage structure during epilithic biofilm development. Ecology 82: 555556.
  • JeffreySW, MantouraRFC & WrightSW (eds) (1997) Phytoplankton Pigments in Oceanography. UNESCO, Paris.
  • Johnson RE, Tuchman NC & Peterson CG (1997) Changes in vertical microdistribution of diatoms within a developing periphyton mat. J N Am Benthol Soc 16: 503519.
  • Lehtola MJ, Laxandera M, Miettinena IT, Hirvonenc A, Vartiainenb T & Martikainenc PJ (2006) The effects of changing water flow velocity on the formation of biofilms and water quality in pilot distribution system consisting of copper or polyethylene pipes. Water Res 40: 21512160.
  • Lock MA & John PH (1979) The effects of flow patterns on uptake of phosphorus by river periphyton. Limnol Oceanogr 24: 376383.
  • Lowe RL, Guckert JB, Belanger SE, Davidson DH & Johnson DW (1996) An evaluation of periphyton community structure and function on tile and cobble substrata in experimental stream mesocosms. Hydrobiology 328: 135146.
  • Lyautey E, Teissier S, Charcosset JY, Rols JL & Garabetian F (2003) Bacterial diversity of epilithic biofilm assemblages of an anthropised river section, assessed by DGGE analysis of a 16 rDNA fragment. Aquat Microb Ecol 33: 217224.
  • Lyautey E, Jackson CR, Cayrou J, Rols J-L & Garabetian F (2005a) Bacterial community succession in natural river biofilm assemblages. Microb Ecol 50: 589601.
  • Lyautey E, Lacoste B, Ten-Hage L, Rols J-L & Garabetian F (2005b) Analysis of bacterial diversity in river biofilms using 16S rDNA PCR-DGGE: methodological settings and fingerprints interpretation. Water Res 39: 380388.
  • Massana R, Murray AE, Preston CM & DeLong EF (1997) Vertical distribution and phylogenetic characterization of marine planktonic Archaea in the Santa Barbara Channel. Appl Environ Microb 63: 5056.
  • McCabe SK & Cyr H (2006) Environmental variability influences the structure of benthic algal communities in an oligotrophic lake. Oikos 115: 197206.
  • Montuelle B, Gouy B, Roger MC et al. (2006) Evaluation de gains biologique et écologique associés à une réduction d'intrants polluants en milieu aquatique. Rapport final Cemagref–CPER 2003–2006, Région Rhône Alpes, 55p.
  • Mosisch TD, Bunn SE & Davies PM (2001) The relative importance of shading and nutrients on algal production in subtropical streams. Freshwater Biol 46: 12691278.
  • Patil JS & Anil AC (2005) Quantification of diatoms in biofilms: standardisation of methods. Biofouling 21: 181188.
  • Pfeifer RF & McDiffett WF (1975) Some factors affecting primary productivity of stream riffle communities. Arch Hydrobiol Suppl 75: 306317.
  • Poff NL & Baker NK (1997) Habitat heterogeneity and algal-grazers interactions in streams: explorations with a spatially explicit model. J N Am Benthol Soc 16: 263276.
  • Roberts S, Sabater S & Beardall J (2004) Benthic microalgal colonization in streams of differing riparian cover and light availability. J Phycol 40: 10041012.
  • Sabater S, Gregory SV & Sedell JR (1998) Community dynamics and metabolism of benthic algae colonizing wood and rock substrata in a forest stream. J Phycol 34: 561567.
  • Sabater S, Navarro E & Guasch H (2002) Effects of copper on algal communities at different current velocities. J Appl Phycol 14: 391398.
  • Schmitt-Jansen M & Altenburger R (2005) Predicting and observing responses of algal communities to photosystem II-herbicide exposure using pollution-induced community tolerance and species-sensitivity distributions. Environ Toxicol Chem 24: 304312.
  • Seguin F, Leboulanger C, Rimet F, Druart JC & Bérard A (2001) Effects of atrazine and nicosulfuron on phytoplankton in systems of increasing complexicity. Arch Environ Con Tox 40: 198208.
  • Steinman AD & McIntire CD (1987) Effects of irradiance on the community structure and biomass of algal assemblages in laboratory streams. Can J Fish Aquat Sci 44: 16401648.
  • Stevenson RJ (1983) Effects of current and conditions simulating autogenically changing microhabitats on benthic diatom immigration. Ecology 64: 15141524.
  • Stevenson RJ (1996) An introduction to algal ecology in freshwater benthic habitats. Algal Ecology (StevensonRJ, BothwellML & LoweRL, eds), pp. 330. Academic Press, San Diego.
  • Stevenson RJ & Glover R (1993) Effects of algal density and current on ion transport through periphyton communities. Limnol Oceanogr 38: 12761281.
  • Szabo K, Makk J, Kiss KT, Eiler A, Acs E, Toth B, Kiss AR & Bertilsson S (2008) Sequential colonization by river periphyton analysed by microscopy and molecular fingerprinting. Freshwater Biol 53: 13591371.
  • Thioulouse J, Chessel D, Dolédec D & Olivier JM (1997) Ade-4: a mulitvariate analysis and graphical display software. Stat Comput 7: 7583.
  • Tlili A, Dorigo U, Montuelle B, Margoum C, Carluer N, Gouy V, Bouchez A & Bérard A (2008) Responses of chronically contaminated biofilms to short pulses of diuron. An experimental study simulating flooding events in a small river running through a vineyard watershed. Aquat Toxicol 87: 252263.
  • Van der Grinten E (2004) Dynamic species interactions in phototrophic biofilms. PhD Thesis, Department of Aquatic Ecology and Ecotoxicology, FNWI, Université d'Amsterdam.
  • Wellnitz T & Rader RB (2003) Mechanisms influencing community composition and succession in mountain stream periphyton: interactions between scouring history, grazing and irradiance. J N Am Benthol Soc 22: 528541.
  • Whitford LA & Schumacher GJ (1961) Effects of current on mineral uptake and respiration by a fresh-water alga. Limnol Oceanogr 6: 423425.
  • Wilhelm C, Rudolph I & Renner W (1991) A quantitative method based on HPLC-aided pigment analysis to monitor structure and dynamics of the phytoplankton assemblage-A study from Lake Meerfelder Maar (Eifel, Germany). Arch Hydrobiol 123: 2135.
  • Ylla I, Romani AM & Sabater S (2007) Differential effects of nutrients and light on the primary production of stream algae and mosses. Fundam Appl Limnol 170: 110.