Editor: Julian Marchesi
Temporal shifts of the Norway lobster (Nephrops norvegicus) gut bacterial communities
Article first published online: 10 SEP 2010
© 2010 Federation of European Microbiological Societies. Published by Blackwell Publishing Ltd. All rights reserved
FEMS Microbiology Ecology
Volume 74, Issue 2, pages 472–484, November 2010
How to Cite
Meziti, A., Ramette, A., Mente, E. and Kormas, K. Ar. (2010), Temporal shifts of the Norway lobster (Nephrops norvegicus) gut bacterial communities. FEMS Microbiology Ecology, 74: 472–484. doi: 10.1111/j.1574-6941.2010.00964.x
- Issue published online: 12 OCT 2010
- Article first published online: 10 SEP 2010
- Accepted manuscript online: 12 AUG 2010 12:00AM EST
- Received 7 March 2010; revised 20 July 2010; accepted 30 July 2010.Final version published online 10 September 2010.
Figure S1. Clone library coverage based on Good's C estimator.
Figure S2. Neighbour-joining tree based on the Mollicutes 16S rRNA gene sequences from the midgut of Nephrops norvegicus.
Figure S3. Gut section (thickness 4 μm) of Nephrops norvegicus sample FSE3 (September) hybridized with Cy3-labeled probe UncMol89 specific for uncultured Mollicutes phylotype Se3-204 detected in this study.
Table S1. Morphometric data for the samples used for ARISA and clone libraries analysis.
Table S2. Samples used for DNA extraction and FISH (all DNA samples were used for ARISA analysis).
Table S3. Oligonucleotide probes used in the study.
Table S4. Pairwise comparisons of the 16S rRNA gene sequence similarities (%) of Photobacterium sp.-like sequences and their closest relatives: (1) Photobacterium leiognathi strain RM1 (AY292947), (2) P. leiognathi (AY292917), (3) Photobacterium sp. HAR23 (AB038031), (4) Photobacterium sp. Jt-ISH-224 (AB293986).
Table S5.In silico detected mismatches (underlined) of phylotypes Se3-204 and D1-695 with primers and probe EUB338 (I-III) used in this study with.
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