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  • Araki H, Tian D, Goss EM, Jakob K, Halldorsdottir SS, Kreitman M & Bergelson J (2006) Presence–absence polymorphism for alternative pathogenicity islands in Pseudomonas viridiflava, a pathogen of Arabidopsis. P Natl Acad Sci USA 103: 58875892.
  • Barea JM, Andrade G, Bianciotto V, Dowling D, Lohrke S, Bonfante P, O'Gara F & Azcón-Aguilar C (1998) Impact on arbuscular mycorrhiza formation of Pseudomonas strains used as inoculants for the biocontrol of soil-borne plant fungal pathogens. Appl Environ Microb 64: 23042307.
  • Bharadwaj DP, Lundquist PO, Persson P & Alström S (2008) Evidence for specificity of cultivable bacteria associated with arbuscular mycorrhizal fungal spores. FEMS Microbiol Ecol 65: 310322.
  • Bianciotto V, Minerdi D, Perotto S & Bonfante P (1996) Cellular interactions between arbuscular mycorrhizal fungi and rhizosphere bacteria. Protoplasma 193: 123131.
  • Bonfante P & Anca IA (2009) Plants, mycorrhizal fungi, and bacteria: a network of interactions. Annu Rev Microbiol 63: 363383.
  • Bossis E, Lemanceau P, Latour X & Gardan L (2000) Taxonomy of Pseudomonas fluorescens and Pseudomonas putida: current status and need for revision. Agronomie 20: 5163.
  • Brundrett MC (2009) Mycorrhizal associations and other means of nutrition of vascular plants: understanding the global diversity of host plants by resolving conflicting information and developing reliable means of diagnosis. Plant Soil 320: 3777.
  • Büttner D & Bonas U (2006) Who comes first? How plant pathogenic bacteria orchestrate type III secretion. Curr Opin Microbiol 9: 193200.
  • Catoira R, Galera R, de Billy F, Penmetsa V, Journet EP, Mailler F, Rosenberg C, Cook D, Gough C & Dénarié J (2000) Four genes of Medicago truncatula controlling components of a Nod factor transduction pathway. Plant Cell 12: 16471665.
  • Coombes BK (2009) Type III secretion systems in symbiotic adaptation of pathogenic and non-pathogenic bacteria. Trends Microbiol 17: 8994.
  • de Boer W, Folman LB, Summerbell RC & Boddy L (2005) Living in a fungal world: impact of fungi on soil bacterial niche development. FEMS Microbiol Rev 29: 795811.
  • Engel J & Balachandran P (2009) Role of Pseudomonas aeruginosa type III effectors in disease. Curr Opin Microbiol 12: 6166.
  • Frey-Klett P, Garbaye J & Tarkka M (2007) The mycorrhiza helper bacteria revisited. New Phytol 176: 2236.
  • Geels FP, Schmidt EDL & Schippers B (1985) The use of 8-hydroxyquinoline for the isolation and prequalification of plant growth-stimulating rhizosphere pseudomonads. Biol Fert Soils 1: 167173.
  • Gophna U, Ron EZ & Graur D (2003) Bacterial type III secretion systems are ancient and evolved by multiple horizontal transfer events. Gene 312: 151163.
  • Hueck CJ (1998) Type III protein secretion systems in bacterial pathogens of animals and plants. Microbiol Mol Biol R 62: 379433.
  • Jackson RW, Preston GM & Rainey PB (2005) Genetic characterization of Pseudomonas fluorescens SBW25 rsp gene expression in the phytosphere and in vitro. J Bacteriol 187: 84778488.
  • Kimura M (1980) A simple model for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16: 111120.
  • King EO, Ward MK & Raney DE (1954) Two simple media for the demonstration of pyocanin and fluorescin. J Lab Clin Med 44: 301307.
  • Mazurier S, Lemunier M, Siblot S, Mougel C & Lemanceau P (2004) Distribution and diversity of type III secretion system-like genes in saprophytic and phytopathogenic fluorescent pseudomonads. FEMS Micobiol Ecol 49: 455467.
  • Mazurier S, Lemunier M, Hartmann H, Siblot S & Lemanceau P (2006) Conservation of type III secretion system genes in Bradyrhizobium isolated from soybean. FEMS Micobiol Lett 259: 317325.
  • Morandi D, Sagan M, Prado-Vivant E & Duc G (2005) Characterization of new symbiotic Medicago truncatula (Gaertn.) mutants, and phenotypic or genotypic complementary information on previously described mutants. Mycorrhiza 15: 283289.
  • Mougel C, Offre P, Ranjard L, Corberand T, Gamalero E, Robin C & Lemanceau P (2006) Dynamic of the genetic structure of bacterial and fungal communities at different development stages of Medicago truncatula Gaertn. cv. Jemalong line J5. New Phytol 170: 165175.
  • Mulya K, Takikawa Y & Tsuyumu S (1996) The presence of regions homologous to hrp cluster in Pseudomonas fluorescens PfG32R. Ann Phytopathol Soc Jpn 62: 355359.
  • Nazir R, Warmink JA, Boersma H & van Elsas JD (2010) Mechanisms that promote bacterial fitness in fungal-affected soil microhabitats. FEMS Micobiol Ecol 71: 169185.
  • Offre P, Pivato B, Mazurier S, Siblot S, Berta G, Lemanceau P & Mougel C (2008) Microdiversity of Burkholderiales associated with mycorrhizal and non-mycorrhizal roots of Medicago truncatula. FEMS Micobiol Ecol 65: 180192.
  • Pallen MJ, Beatson SA & Bailey CM (2005) Bioinformatics, genomics and evolution of non-flagellar type-III secretion systems: a Darwinian perspective. FEMS Microbiol Rev 29: 201229.
  • Pivato B, Mazurier S, Lemanceau P, Siblot S, Berta G, Mougel C & van Tuinen D (2007) Medicago species affect the community composition of arbuscular mycorrhizal fungi associated with roots. New Phytol 176: 197210.
  • Pivato B, Gamalero E, Lemanceau P & Berta G (2008) Cell organization of Pseudomonas fluorescens C7R12 on adventitious roots of Medicago truncatula as affected by arbuscular mycorrhiza. FEMS Microbiol Lett 289: 173180.
  • Pivato B, Offre P, Marchelli S, Barbonaglia B, Mougel C, Lemanceau P & Berta G (2009) Bacterial effects on arbuscular mycorrhizal fungi and mycorrhiza development as influenced by the bacteria, fungi, and host plant. Mycorrhiza 19: 8190.
  • Preston GM (2007) Metropolitan microbes: type III secretion in multihost symbionts. Cell Host Mic 2: 291294.
  • Preston GM, Bertrand N & Rainey B (2001) Type III secretion in plant growth-promoting Pseudomonas fluorescens SBW25. Mol Microbiol 41: 9991014.
  • Qiu X, Gurkar AU & Lory S (2006) Interstrain transfer of the large pathogenicity island (PAPI-1) of Pseudomonas aeruginosa. P Natl Acad Sci USA 103: 1983019835.
  • Rademaker JLW, Hoste B, Louws FJ, Kersters K, Swings J, Vauterin L, Vauterin P & de Bruijn FJ (1997) Comparison of AFLP and rep-PCR genomic fingerprinting with DNA–DNA homology studies: Xanthomonas as a model system. Int J Syst Evol Micr 50: 665677.
  • Rambelli A (1973) The rhizosphere of mycorrhizae. Ectomycorrhizae (MarksGL & KoslowskiTT, ed), pp. 299343. Academic Press, NY, USA.
  • Rezzonico F, Défago G & Möenne-Loccoz Y (2004) Comparison of ATPase-encoding type III secretion system hrcN genes in biocontrol fluorescent pseudomonads and in phytopathogenic proteaobacteria. Appl Environ Microb 70: 51195131.
  • Rezzonico F, Binder C, Défago G & Moënne-Loccoz Y (2005) The type III secretion system of biocontrol Pseudomonas fluorescens KD targets the phytopathogenic chromista Pythium ultimum and promotes cucumber protection. Mol Plant Microbe In 18: 9911001.
  • Roesti D, Ineichen K, Braissant O, Redecker D, Wiemken A & Aragno M (2005) Bacteria associated with spores of arbuscular mycorrhizal fungi Glomus geosporum and Glomus constrictum. Appl Environ Microb 71: 66736679.
  • Sagan M, Morandi E, Tarenghi E & Duc G (1995) Selection of nodulation and mycorrhizal mutants in the model plant Medicago truncatula (Gaertn.) after gamma-ray mutagenesis. Plant Sci 111: 6371.
  • Saitou N & Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4: 406425.
  • Smith SE & Read DJ (2008) Mycorrhizal Symbiosis, 3rd edn. Academic Press, London, UK.
  • Sorg I & Cornelis GR (2009) The type III secretion system. Bacterial Secreted Proteins: Secretory Mechanisms and Role in Pathogenesis (WooldridgeK, eds.), pp. 93116. Caister Academic Press, Norfolk, UK.
  • Spiers AJ, Buckling A & Rainey PB (2000) The causes of Pseudomonas diversity. Microbiology 146: 23452350.
  • Thompson JD, Higgins DG & Gibson TJ (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22: 46734680.
  • Toljander JF, Artursson V, Paul LR, Jansson JK & Finlay RD (2006) Attachment of different soil bacteria to arbuscular mycorrhizal fungal extraradical hyphae is determined by hyphal vitality and fungal species. FEMS Microbiol Lett 254: 3440.
  • Trouvelot A, Kough JL & Gianinazzi-Pearson V (1986) Mesure du taux de mycorhization VA d'un système radiculaire. Recherche de méthodes d'estimation ayant une signification fonctionnelle. Physiological and Genetical Aspects of Mycorrhizae (Gianinazzi-PearsonV & GianinazziS, eds), pp. 217221. INRA Presse, Paris, France.
  • Versalovic J, Schneider M, de Bruijn FJ & Lupski JR (1994) Genomic fingerprinting of bacteria using repetitive sequence based polymerase chain reaction. Method Mol Cell Biol 5: 2540.
  • Warmink JA & van Elsas JD (2008) Selection of bacterial populations in the mycosphere of Laccaria proxima: is type III secretion involved? ISME J 2: 887900.
  • Warmink JA, Nazir R & van Elsas JD (2008) Universal and species-specific bacterial ‘fungiphiles’ in the mycospheres of different basidiomycetous fungi. Environ Microbiol 11: 300312.