SEARCH

SEARCH BY CITATION

References

  • Abell GCJ & Bowman JP (2005) Ecological and bio-geographic relationships of class Flavobacteria in the Southern Ocean. FEMS Microbiol Ecol 51: 265277.
  • Aislabie JM, Chhour KL, Saul DJ, Miyauchi S, Ayton J, Paetzold RF & Balks MR (2006) Dominant bacteria in soils of Marble Point and Wright Valley, Victoria Land, Antarctica. Soil Biol Biochem 38: 30413056.
  • Aislabie JM, Jordan S & Barker GM (2008) Relation between soil classification and bacterial diversity in soils of the Ross Sea region, Antarctica. Geoderma 144: 920.
  • Bañón M (2001) Observaciones meteorológicas en la Base Antártica Española Juan Carlos I. Monografía A-151, Instituto Nacional de Meteorología, Ministerio Medio Ambiente, Madrid.
  • Barns SM, Takala SL & Kuske CR (1999) Wide distribution of members of the bacterial kingdom Acidobacterium in the environment. Appl Environ Microb 65: 17311737.
  • Barns SM, Cain EC, Sommerville L & Kuske CR (2007) Acidobacteria sequences in uranium-contaminated subsurface sediments expand the known diversity within the phylum. Appl Environ Microb 73: 31133116.
  • Bartlett KB, Crill PM, Sass RL, Harriss RC & Dise NB (1992) Methane emissions from tundra environments in the Yukon-Kuskokwim delta, Alaska. J Geophys Res 97: 1664516660.
  • Björck S & Zale R (1996) Late Holocene tephrochronology and palaeoclimate, based on lake sediment studies. Geomorphological Map of Byers Peninsula, Livingston Island. BAS Geomap Series 5-A (López-MartínezJ, ThomsonMRA & ThomsonJW, eds), pp. 4348. British Antarctic Survey, Cambridge.
  • Björck S, Hakansson H, Zale R, Karlen W & Jönsson BL (1991) A late Holocene lake sediment sequence from Livingston Island, South Shetland Islands, with palaeoclimatic implications. Ant Sci 3: 6172.
  • Björck S, Hjort C, Ingólfsson O, Zale R & Ising J (1996) Holocene deglaciation chronology from lake sediments. Geomorphological Map of Byers Peninsula, Livingston Island. BAS Geomap Series 5-A (López-MartínezJ, ThomsonMRA & ThomsonJW, eds), pp. 4951. British Antarctic Survey, Cambridge.
  • Bokhorst S, Huiskes A, Convey P & Aerts R (2007) Climate change effects on organic matter decomposition rates in ecosystems from the maritime Antarctic and Falkland Islands. Global Change Biol 13: 26422653.
  • Bölter M (1995) Distribution of bacterial numbers and biomass in soils and on plants from King George Island (Arctowski Station, Maritime Antarctica). Polar Biol 15: 115124.
  • Bölter M, Kappen L & Meyer M (1989) The influence of microclimatic conditions on potential photosynthesis of Usnea sphacelata– a model. Ecol Res 4: 297307.
  • Bölter M, Kandeler E, Pieter SJ & Seppelt RD (2002) Heterotrophic microbes, microbial and enzymatic activity in Antarctic soils. Geoecology of Antarctic Ice-Free Coastal Landscapes (BeyerL & BölterM, eds), pp. 190207. Springer-Verlag, Berlin.
  • Bowman JP, McCammon SA, Brown MV, Nichols DS & McMeekin TA (1997) Diversity and association of psychrophilic bacteria in Antarctic sea ice. Appl Environ Microb 63: 30683078.
  • Brinkmeyer R, Knittel K, Jurgens J, Weyland H, Amann R & Helmke E (2003) Diversity and structure of bacterial communities in Arctic versus Antarctic pack ice. Appl Environ Microb 69: 66106619.
  • Brown MV & Bowman JP (2001) A molecular phylogenetic survey of sea-ice microbial communities (SIMCO). FEMS Microbiol Ecol 35: 267275.
  • Bull ID, Parekh NR, Hall GH, Ineson P & Evershed RP (2000) Detection and classification of atmospheric methane oxidizing bacteria in soil. Nature 405: 175178.
  • Calvet J, Pallas R, Sabat F & Vilaplana JM (1993) Los niveles de cenizas de los glaciares de Livingston – criterios para su adaptacion. Actas del V simposio espanol de estudios Antarcticos (CachoJ & SerratD, eds), pp. 195208. Comision interministerial de ciencia y tecnologia, Barcelona.
  • Cannone N, Wagner D, Hubberten HW & Guglielmin M (2008) Biotic and abiotic factors influencing soil properties across a latitudinal gradient in Victoria Land, Antarctica. Geoderma 144: 5065.
  • Chintalapati S, Kiran MD & Shivaji S (2004) Role of membrane lipid fatty acids in cold adaptation. Cell Mol Biol 50: 631642.
  • Chong CW, Dunn MJ, Convey P, Tan GYA, Wong RCS & Tan IKP (2009a) Environmental influences on bacterial diversity of soils on Signy Island, maritime Antarctic. Polar Biol 32: 15711582.
  • Chong CW, Tan GYA, Wong RCS, Riddle MJ & Tan IKP (2009b) DGGE fingerprinting of bacteria in soils from eight ecologically different sites around Casey Station, Antarctica. Polar Biol 32: 853860.
  • Christensen TR, Jonasson S, Callaghan TV & Havstrom M (1995) Spatial variation in high-latitude methane flux along a transect across Siberian and European tundra environments. J Geophys Res 100: 2103521045.
  • Costerton JW, Lewandowski Z, Caldwell DE, Korber DR & Lappin-Scott HM (1995) Microbial biofilms. Annu Rev Microbiol 49: 711745.
  • Cowan DA, Russell NJ, Mamais A & Sheppard DM (2002) Antarctic Dry Valley mineral soils contain unexpectedly high levels of microbial biomass. Extremophiles 6: 431436.
  • Dunbar J, Barns SM, Ticknor LO & Kuske CR (2002) Empirical and theoretical bacterial diversity in four Arizona soils. Appl Environ Microb 68: 30353045.
  • Eichorst SA, Breznak JA & Schmidt TM (2007) Isolation and characterization of soil bacteria that define Terriglobus gen. nov., in the phylum Acidobacteria. Appl Environ Microb 73: 27082717.
  • Ekelund F, Rønn R & Christensen S (2001) Distribution with depth of protozoa, bacteria and fungi in soil profiles from three Danish forest sites. Soil Biol Biochem 33: 475481.
  • England LS, Lee H & Trevors JT (1993) Bacterial survival in soil: effect of clays and protozoa. Soil Biol Biochem 25: 525531.
  • Fernández-Valiente E, Camacho A, Rochera C, Rico E, Vincent WF & Quesada A (2007) Community structure and physiological characterization of microbial mats in Byers Peninsula, Livingston Island (South Shetland Islands, Antarctica). FEMS Microbiol Ecol 59: 377385.
  • Fierer N, Bradford MA & Jackson RB (2007) Toward an ecological classification of soil bacteria. Ecology 88: 13541364.
  • Foong CP, Ling CMWV & González M (2010) Metagenomic analyses of the dominant bacterial community in the Fildes Peninsula, King George Island (South Shetland Islands). Polar Sci 4: 263273.
  • Ganzert L, Bajerski F, Mangelsdorf K, Lipski A & Wagner D (2011) Arthrobacter livingstonensis sp. nov. and Arthrobacter cryotolerans sp. nov., salt- and psychrotolerant species isolated from Livingston Island, Antarctica. Int J Syst Evol Micr, in press. DOI: DOI: 10.1099/ijs.0.021022-0.
  • Gattinger A, Günthner A, Schloter M & Munch JC (2003) Characterisation of Archaea in soils by polar lipid analysis. Acta Biotechnol 23: 2128.
  • Gentile G, Giuliano L, D'Auria G, Smedile F, Azzaro M, De Domenico M & Yakimov MM (2006) Study of bacterial communities in Antarctic coastal waters by a combination of 16S rRNA and 16S rDNA sequencing. Environ Microbiol 8: 21502161.
  • Gregorich EG, Hopkins DW, Elberling B, Sparrow AD, Novis P, Greenfield LG & Rochette P (2006) Emission of CO2, CH4 and N2O from lakeshore soils in an Antarctic dry valley. Soil Biol Biochem 38: 31203129.
  • Henckel T, Jäckel U, Schnell S & Conrad R (2000) Molecular analyses of novel methanotrophic communities in forest soil that oxidize atmospheric methane. Appl Environ Microb 66: 18011808.
  • Holmes AJ, Roslev P, McDonald IR, Iversen N, Henriksen K & Murrell JC (1999) Characterization of methanotrophic bacterial populations in soils showing atmospheric methane uptake. Appl Environ Microb 65: 33123318.
  • Janssen PH (2006) Identifying the dominant soil bacterial taxa in libraries of 16S rRNA and 16S rRNA genes. Appl Environ Microb 72: 17191728.
  • Kemmitt SJ, Wright D, Goulding KWT & Jones DL (2006) pH regulation of carbon and nitrogen dynamics in two agricultural soils. Soil Biol Biochem 38: 898911.
  • Kishimoto N, Kosako Y & Tano T (1991) Acidobacterium capsulatum gen. nov., sp. nov.: an acidophilic chemoorganotrophic bacterium containing menaquinone from acidic mineral environment. Curr Microbiol 22: 17.
  • Knief C, Altendorf K & Lipski A (2003) Linking autotrophic activity in environmental samples with specific bacterial taxa by detection of 13C-labelled fatty acids. Environ Microbiol 5: 11551167.
  • Kobabe S, Wagner D & Pfeiffer EM (2004) Characterisation of microbial community composition of a Siberian tundra soil by fluorescence in situ hybridisation. FEMS Microbiol Ecol 50: 1323.
  • Koch IH, Gich F, Dunfield PF & Overmann J (2008) Edaphobacter modestus gen. nov., sp. nov., and Edaphobacter aggregans sp. nov., acidobacteria isolated from alpine and forest soils. Int J Syst Evol Micr 58: 11141122.
  • Kolb S, Knief C, Dunfield PF & Conrad R (2005) Abundance and activity of uncultured methanotrophic bacteria involved in the consumption of atmospheric methane in two forest soils. Environ Microbiol 7: 11501161.
  • Kulichevskaya IS, Suzina NE, Liesack W & Dedysh SN (2010) Bryobacter aggregatus gen. nov., sp. nov., a peat-inhabiting, aerobic chemo-organotroph from subdivision 3 of the Acidobacteria. Int J Syst Evol Micr 60: 301306.
  • Lewis-Smith RI (1986) Plant ecological studies in the fellfield ecosystem near Casey Station, Australian Antarctic Territory, 1985–1986. Brit Antarct Surv B 72: 8191.
  • Leyer I & Wesche K (2007) Multivariate Statistics in Ecology. Springer Verlag, Berlin Heidelberg. pp. 3745 (in German).
  • Li SK, Xiao X, Yin XB & Wang FP (2006) Bacterial community along a historic lake sediment core of Ardley Island, west Antarctica. Extremophiles 10: 461467.
  • Liebner S, Harder J & Wagner D (2008) Bacterial diversity and community structure in polygonal tundra soils from Samoylov Island, Lena Delta, Siberia. Int Microbiol 11: 195202.
  • Liebner S, Rublack K, Stuehrmann T & Wagner D (2009) Diversity of aerobic methanotrophic bacteria in a permafrost active layer soil of the Lena Delta, Siberia. Microb Ecol 57: 2535.
  • Lipski A & Altendorf K (1997) Identification of heterotrophic bacteria isolated from ammonia-supplied experimental biofilters. Syst Appl Microbiol 20: 448457.
  • Lipson DA & Schmidt SK (2004) Seasonal changes in an alpine soil bacterial community in the Colorado Rocky Mountains. Appl Environ Microb 70: 28672879.
  • Ludwig W, Strunk O, Westram R et al. (2004) ARB: a software environment for sequence data. Nucleic Acids Res 32: 13631371.
  • MacRae IC & Castro TF (1966) Carbohydrates and amino acids in the root exsudates of rice seedlings. Phyton 23: 95100.
  • Mangelsdorf K, Finsel E, Liebner S & Wagner D (2009) Temperature adaptation of microbial communities in different horizons of Siberian permafrost-affected soils from the Lena-Delta. Chem Erde-Geochem 69: 169182.
  • Muyzer G, De Waal EC & Uitterlinden AG (1993) Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Appl Environ Microb 59: 695700.
  • Muyzer G, Teske A, Wirsen CO & Jannasch HW (1995) Phylogenetic relationships of Thiomicrospira species and their identification in deep-sea hydrothermal vent samples by denaturing gradient gel electrophoresis. Arch Microbiol 164: 165172.
  • Nakano T, Kuniyoshi S & Fukuda M (2000) Temporal variation in methane emission from tundra wetlands in a permafrost area, northeastern Siberia. Atmos Environ 34: 12051213.
  • Nichols DS, Bowman JP, Sanderson K, Mancuso-Nichols C, Lewis TE, McMeekin TA & Nichols PD (1999) Developments with Antarctic microorganisms: culture collections, bioactivity screening, taxonomy, PUFA production and cold-adapted enzymes. Curr Opin Biotechnol 10: 240246.
  • Nichols DS, Miller MR, Davies NW, Goodchild A, Raftery M & Cavicchioli R (2004) Cold adaptation in the Antarctic archaeon Methanococcoides burtonii involves membrane lipid unsaturation. J Bacteriol 186: 85088515.
  • Niederberger TD, McDonald IR, Hacker AL, Soo RM, Barrett JE, Wall DH & Cary SC (2008) Microbial community composition in soils of Northern Victoria Land, Antarctica. Environ Microbiol 10: 17131724.
  • Novis PM, Whitehead D, Gregorich EG, Hunt JE, Sparrow AD, Hopkins DW, Elberling B & Greenfield LG (2007) Annual carbon fixation in terrestrial populations of Nostoc commune (Cyanobacteria) from an Antarctic dry valley is driven by temperature regime. Glob Change Biol 13: 12241237.
  • Omelchenko MB, Vasieleva LV, Zavarzin GA, Savelieva ND, Lysenko AM, Mityushina LL, Khmelenina VN & Trotsenko YA (1996) A novel psychrophilic methanotroph of the genus Methylobacter. Microbiology 65: 339343 (translated from Mikrobiologiya).
  • Pankratov TA, Kulichevskaya IS, Liesack W & Dedysh SN (2006) Isolation of aerobic, gliding, xylanolytic and laminarinolytic bacteria from acidic Sphagnum peatlands and emended description of Chitinophaga arvensicola Kämpfer et al. 2006. Int J Syst Evol Micr 56: 27612764.
  • Pearce DA, van der Gast CJ, Lawley B & Ellis-Evans JC (2003) Bacterioplankton community diversity in a maritime Antarctic lake, determined by culture-dependent and culture-independent techniques. FEMS Microbiol Ecol 45: 5970.
  • Pointing SB, Chan Y, Lacap DC, Lau MCY, Jurgens JA & Farrell RL (2009) Highly specialized microbial diversity in hyper-arid polar desert. P Natl Acad Sci USA 106: 1996419969.
  • Pruesse E, Quast C, Knittel K, Fuchs B, Ludwig W, Peplies J & Glöckner FO (2007) SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB. Nucleic Acids Res 35: 71887196.
  • Purdy KJ, Nedwell DB & Embley TM (2003) Analysis of the sulfate-reducing bacterial and methanogenic archaeal populations in contrasting Antarctic sediments. Appl Environ Microb 69: 31813191.
  • Ramos M & Vieira G (2003) Active layer and permafrost monitoring in Livingston Island, Antarctic. First results from 2000 to 2001. Proceedings of the 8th International Conference on Permafrost, Zurich, Switzerland (PhillipsM, SpringmanS & ArensonSM, eds), pp. 929933. Balkema Publishers, Lisse.
  • Ramsay AJ & Stannard RE (1986) Numbers and viability of bacteria in ornithogenic soils of Antarctica. Polar Biol 5: 195198.
  • Rinnan R, Rousk J, Yergeau E, Kowalchuk GA & Bååth E (2009) Temperature adaptation of soil bacterial communities along an Antarctic climate gradient: predicting responses to climate warming. Global Change Biol 15: 26152625.
  • Roselló-Mora R & Amann R (2001) The species concept for prokaryotes. FEMS Microbiol Rev 25: 3967.
  • Roser DJ, Seppelt RD & Ashbolt N (1993) Microbiology of ornithogenic soils from the Windmill Islands, Budd Coast, continental Antarctica: microbial biomass distribution. Soil Biol Biochem 25: 165175.
  • Rovira AD (1969) Plant root exsudates. Bot Rev 35: 3537.
  • Saitou N & Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4: 406425.
  • Saul DJ, Aislabie JM, Brown CE, Harris L & Foght JM (2005) Hydrocarbon contamination changes the bacterial diversity of soil from around Scott Base, Antarctica. FEMS Microbiol Ecol 53: 141155.
  • Schlichting E, Blume HP & Stahr K (1995) Bodenkundliches Praktikum (in German). Blackwell Wissenschafts-Verlag, Berlin, Wien.
  • Schloss PD & Handelsman J (2005) Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness. Appl Environ Microb 71: 15011506.
  • Schmidt N (1999) Microbial properties and habitats of permafrost soils on Taymir peninsula, central Siberia. Rep Polar Res 340: 1164.
  • Schwamborn G, Wagner D & Hubberten HW (2008) The use of GPR to detect active layer in young periglacial terrain of Livingston Island, Maritime Antarctica. Near Surf Geophys 6: 331336.
  • Shivaji S, Ray MK, Rao NS, Saisree L, Jagannadham MV, Kumar MV, Reddy GSN & Bhargava PM (1992) Sphingobacterium antarcticus sp. nov. a psychrotrophic bacterium from the soils of Schirrmacher Oasis, Antarctica. Int J Syst Bacteriol 42: 102106.
  • Shivaji S, Reddy GSN, Aduri RP, Kutty R & Ravenschlag K (2004) Bacterial diversity of a soil sample from Schirmacher Oasis, Antarctica. Cell Mol Biol (Noisy-le-grand) 50: 525536.
  • Shravage BV, Dayananda KM, Patole MS & Shouche YS (2007) Molecular microbial diversity of a soil sample and detection of ammonia oxidizers from Cape Evans, McMurdo Dry Valley, Antarctica. Microbiol Res 162: 1525.
  • Sigler WV, Cricii S & Zeyer J (2002) Bacterial succession in glacial forefield soils characterized by community structure, activity and opportunistic growth dynamics. Microb Ecol 44: 306316.
  • Smith JJ, Tow LA, Stafford W, Cary C & Cowan DA (2006) Bacterial diversity in three different Antarctic cold desert mineral soils. Microb Ecol 51: 413421.
  • Ström L, Ekberg A, Mastepanov M & Christensen TB (2003) The effect of vascular plants on carbon turnover and methane emissions from a tundra wetland. Global Change Biol 9: 11851192.
  • Sun LG, Zhu RB, Xie ZQ & Xing GX (2002) Emissions of nitrous oxide and methane from Antarctic Tundra: role of penguin dropping deposition. Atmos Environ 36: 49774982.
  • Taton A, Grubisic S, Balthasart P, Hodgson DA, Laybourn-Parry J & Wilmotte A (2006) Biogeographical distribution and ecological ranges of benthic cyanobacteria in East Antarctic lakes. FEMS Microbiol Ecol 57: 272289.
  • Ter Braak CJF (1986) Canonical correspondence analysis: a new eigenvektor technique for multivariate direct gradient analysis. Ecology 67: 11671179.
  • Toro M, Camacho A, Rochera C et al. (2007) Limnological characteristics of the freshwater ecosystems of Byers Peninsula, Livingston Island, in maritime Antarctica. Polar Biol 30: 635649.
  • Ugolini FC & Bockheim JG (2008) Antarctic soils and soil formation in a changing environment: a review. Geoderma 144: 18.
  • van Loosdrecht MCM, Lyklema J, Norde W & Zehnder AJB (1990) Influence of interfaces on microbial activity. Microbiol Rev 54: 7587.
  • van Veen JA, Merckx S & van de Geijn SC (1989) Plant- and soil-related controls of the flow of carbon from roots through the soil microbial biomass. Plant Soil 115: 179188.
  • Vieira G & Ramos M (2003) Geographic factors and geocryological activity in Livingston Island, Antarctic. Preliminary results. Proceedings of the 8th International Conference on Permafrost (PhillipsM, SpringmanS & ArensonSM, eds), pp. 11831188. Balkema Publishers, Lisse.
  • Wagner D, Lipski A, Embacher A & Gattinger A (2005) Methane fluxes in permafrost habitats of the Lena Delta: effects of microbial community structure and organic matter quality. Environ Microbiol 7: 15821592.
  • Wagner D, Kobabe S & Liebner S (2009) Bacterial community structure and carbon turnover on permafrost-affected soils of the Lena Delta, northeastern Siberia. Can J Microbiol 55: 7373.
  • Wang Q, Garrity GM, Tiedje JM & Cole JR (2007) Naïve bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy. Appl Environ Microb 73: 52615267.
  • Wille C, Kutzbach L, Sachs T, Wagner D & Pfeiffer EM (2008) Methane emission from Siberian arctic polygonal tundra: eddy covariance measurements and modeling. Global Change Biol 14: 13951408.
  • Xiao X, Li M, You Z & Wang F (2007) Bacterial communities inside and in the vicinity of the Chinese Great Wall Station, King George Island, Antarctica. Antarct Sci 19: 1116.
  • Yergeau E, Newsham KK, Pearce DA & Kowalchuk GA (2007) Patterns of bacterial diversity across a range of Antarctic terrestrial habitats. Envion Microbiol 9: 26702682.
  • Yergeau E, Schoondermark-Stolk SA, Brodie EL, Déjean S, DeSantis TZ, Gonalves O, Piceno YM, Andersen GL & Kowalchuk GA (2009) Environmental microarray analyses of Antarctic soil microbial communities. ISME J 3: 340351.
  • Zhu RB & Sun LG (2005) Methane fluxes from tundra soils and snowpack in the maritime Antarctic. Chemosphere 59: 15831593.